IRF2BP2

General Information

Gene Name : IRF2BP2
Gene ID : ENSG00000168264.10
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: IRF2BP2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	IRF2BP2	ENSG00000168264.10	15.06	44.05	29.55	ENCSR000AEF
HepG2	IRF2BP2	ENSG00000168264.10	142.52	78.07	110.30	ENCSR985KAT
K562	IRF2BP2	ENSG00000168264.10	43.34	31.61	37.48	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for IRF2BP2 is not avaliable on ENCORE database.

Proteins bound to RNA

IRF2BP2 RNA is bound by 35 proteins.

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eCLIP assay for IRF2BP2 is not avaliable on ENCORE database.

35 proteins are bound to IRF2BP2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	234742482	234742508	-	3'-UTR,intron-Distal	6.08960	63.77029	K562	PABPC4
chr1	234745166	234745260	-	5'-UTR,CDS,intron-Distal	3.14640	43.18527	HepG2	DDX3X
chr1	234743355	234743459	-	CDS,intron-Distal	3.28509	42.69577	HepG2	IGF2BP1
chr1	234742548	234742673	-	3'-UTR,intron-Distal	4.16526	41.52558	HepG2	FUBP3
chr1	234743583	234743616	-	CDS,intron-Distal	3.56824	39.20068	HepG2	U2AF2
chr1	234742508	234742529	-	3'-UTR,intron-Distal	8.05071	35.96532	K562	PABPC4
chr1	234744915	234744951	-	CDS,intron-Distal	4.27315	32.34062	HepG2	RBM15
chr1	234744070	234744160	-	intron-Distal	3.95108	31.14908	HepG2	BUD13
chr1	234742749	234742784	-	3'-UTR,intron-Distal	5.21463	31.13490	K562	PUM2
chr1	234743421	234743457	-	CDS,intron-Distal	3.86822	30.14317	HepG2	RBM15
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 128 entries

eCLIP assay for IRF2BP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for IRF2BP2 is not available on ENCORE database.
136 RBPs can affect the levels of IRF2BP2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for IRF2BP2 is not available on ENCORE database.

136 RBPs can affect the gene expression of IRF2BP2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
IRF2BP2	ENSG00000168264.6	3183.15540	7856.00180	-1.30330	103.44800	101.55970	HepG2	SRSF1
IRF2BP2	ENSG00000168264.6	2584.58770	6403.08210	-1.30880	93.43970	91.56960	HepG2	SSB
IRF2BP2	ENSG00000168264.6	1556.45880	4214.23050	-1.43700	62.09490	60.31250	HepG2	TIAL1
IRF2BP2	ENSG00000168264.6	3987.81310	7407.98650	-0.89350	57.46170	55.31690	HepG2	SUCLG1
IRF2BP2	ENSG00000168264.6	2828.83900	8392.48270	-1.56890	44.26490	42.05390	HepG2	DDX3X
IRF2BP2	ENSG00000168264.6	2775.75410	6597.23340	-1.24900	42.39050	40.41120	HepG2	PUF60
IRF2BP2	ENSG00000168264.6	3922.25000	7229.39610	-0.88220	41.49390	39.90120	HepG2	PTBP1
IRF2BP2	ENSG00000168264.6	2681.53220	4503.94950	-0.74810	40.38100	38.44610	HepG2	SMN1
IRF2BP2	ENSG00000168264.6	1897.15230	4671.66920	-1.30010	39.98770	37.86440	HepG2	DDX21
IRF2BP2	ENSG00000168264.6	4004.90150	6335.78340	-0.66180	35.85260	34.46160	HepG2	ZNF622
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 166 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for IRF2BP2 is not available on ENCORE database.

7 RBPs can affect the splicing of IRF2BP2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	IRF2BP2	ENSG00000168264.6	chr1	-	234744192	234745271	234744240	234745271	234740014	234743598	-0.19700	0.00000	0.00007	shorter	HepG2	HNRNPK
A5SS	IRF2BP2	ENSG00000168264.6	chr1	-	234744192	234745271	234744240	234745271	234740014	234743598	0.25700	0.00001	0.00158	longer	HepG2	SRSF1
A5SS	IRF2BP2	ENSG00000168264.6	chr1	-	234744192	234745271	234744240	234745271	234740014	234743598	-0.18000	0.00001	0.00716	shorter	HepG2	HNRNPL
A5SS	IRF2BP2	ENSG00000168264.6	chr1	-	234744192	234745271	234744240	234745271	234740014	234743598	-0.16200	0.00004	0.00645	shorter	K562	RBM15
A5SS	IRF2BP2	ENSG00000168264.6	chr1	-	234744192	234745271	234744240	234745271	234740014	234743598	0.18000	0.00008	0.08220	longer	HepG2	XRCC6
A5SS	IRF2BP2	ENSG00000168264.6	chr1	-	234744192	234745271	234744240	234745271	234740014	234743598	-0.15600	0.00010	0.00562	shorter	K562	PUS1
A5SS	IRF2BP2	ENSG00000168264.6	chr1	-	234744192	234745271	234744240	234745271	234740014	234743598	0.15100	0.00121	0.08473	longer	HepG2	RBM22

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

IRF2BP2

General Information

Functions

Localization

Domains (AlphaFold: IRF2BP2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for IRF2BP2 is not avaliable on ENCORE database.

35 proteins are bound to IRF2BP2 RNA:

eCLIP assay for IRF2BP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for IRF2BP2 is not available on ENCORE database.

136 RBPs can affect the gene expression of IRF2BP2 :

The Knockdown/knockout RNA-Seq assay for IRF2BP2 is not available on ENCORE database.

7 RBPs can affect the splicing of IRF2BP2 :

The Knockdown/knockout RNA-Seq assay for IRF2BP2 is not avaliable on ENCORE database.