GAN

General Information

Gene Name : GAN
Gene ID : ENSG00000261609.6
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GAN)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GAN	ENSG00000261609.6	1.03	0.92	0.98	ENCSR000AEF
HepG2	GAN	ENSG00000261609.6	2.07	2.54	2.30	ENCSR985KAT
K562	GAN	ENSG00000261609.6	1.79	1.58	1.69	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GAN is not avaliable on ENCORE database.

Proteins bound to RNA

GAN RNA is bound by 12 proteins.

eCLIP assay for GAN is not avaliable on ENCORE database.

12 proteins are bound to GAN RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	81420016	81420085	+	3'-UTR,intron-Distal	4.61337	12.68141	K562	TARDBP
chr16	81412390	81412461	+	3'-UTR	3.91261	4.19039	HepG2	PTBP1
chr16	81413259	81413324	+	3'-UTR	3.40695	3.77931	K562	UPF1
chr16	81422988	81423046	+	3'-UTR	3.26970	4.11795	K562	YBX3
chr16	81385240	81385299	+	CDS	3.49859	3.27569	HepG2	BCLAF1
chr16	81348724	81348792	+	CDS	3.14097	3.36616	K562	NONO
chr16	81397400	81397481	+	CDS	3.80272	3.30425	K562	LIN28B
chr16	81397413	81397548	+	CDS	4.35982	7.53358	HepG2	BCLAF1
chr16	81362790	81362875	+	intron-Distal	3.26574	3.10961	HepG2	MATR3
chr16	81405660	81405728	+	intron-Distal	4.99128	4.90095	K562	PTBP1
chr16	81351673	81351767	+	intron-Distal	4.10155	4.14103	K562	KHSRP
chr16	81349170	81349214	+	intron-Distal	3.76070	3.30664	K562	NONO
chr16	81351793	81351895	+	intron-Distal	4.69406	6.93191	K562	KHSRP
chr16	81377863	81377952	+	intron-Distal	3.34455	3.95937	K562	UCHL5
chr16	81350104	81350203	+	intron-Distal	4.85234	4.95161	K562	GTF2F1
chr16	81361924	81362048	+	intron-Distal	3.02132	3.29251	K562	KHSRP
chr16	81349130	81349241	+	intron-Distal	4.33279	5.15063	HepG2	CSTF2T
chr16	81350105	81350183	+	intron-Distal	3.35689	3.61506	K562	NONO
chr16	81351895	81351983	+	intron-Distal	3.39168	7.29915	K562	KHSRP
chr16	81386127	81386249	+	intron-Distal	4.64433	4.40618	K562	PTBP1
chr16	81405634	81405726	+	intron-Distal	4.76459	6.36200	HepG2	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for GAN is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GAN is not available on ENCORE database.
92 RBPs can affect the levels of GAN.

The Knockdown/knockout RNA-Seq assay for GAN is not available on ENCORE database.

92 RBPs can affect the gene expression of GAN :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GAN	ENSG00000261609.3	899.32910	579.08050	0.63500	10.32400	9.30490	HepG2	ACO1
GAN	ENSG00000261609.3	1451.34240	702.80170	1.04610	13.05630	11.98820	HepG2	AKAP1
GAN	ENSG00000261609.3	304.42680	429.97460	-0.49820	2.11710	1.32660	HepG2	BCLAF1
GAN	ENSG00000261609.3	363.09810	579.08660	-0.67340	5.19040	4.33110	HepG2	CKAP4
GAN	ENSG00000261609.3	397.52460	545.25220	-0.45590	3.71830	2.53610	HepG2	YBX3
GAN	ENSG00000261609.3	731.21270	592.14370	0.30420	2.05110	1.48280	HepG2	CELF1
GAN	ENSG00000261609.3	474.68350	636.84920	-0.42400	4.22700	3.34140	HepG2	DAZAP1
GAN	ENSG00000261609.3	272.22550	394.41290	-0.53490	3.20450	2.47830	HepG2	DDX21
GAN	ENSG00000261609.3	274.30470	455.21670	-0.73080	3.44630	2.02230	HepG2	DDX27
GAN	ENSG00000261609.3	1058.09480	673.26770	0.65210	5.95860	5.07380	HepG2	DDX3X
GAN	ENSG00000261609.3	793.10820	578.26400	0.45570	2.69150	2.08230	HepG2	DDX6
GAN	ENSG00000261609.3	391.75540	554.05730	-0.50010	3.50510	2.75630	HepG2	DKC1
GAN	ENSG00000261609.3	296.36460	535.41370	-0.85330	10.37830	9.08630	HepG2	DNAJC21
GAN	ENSG00000261609.3	241.56310	530.66120	-1.13540	19.82990	18.23490	HepG2	DNAJC2
GAN	ENSG00000261609.3	284.19080	410.82950	-0.53170	2.78690	1.86400	HepG2	EEF2
GAN	ENSG00000261609.3	515.89150	363.34870	0.50560	2.67740	1.59120	HepG2	AGO1
GAN	ENSG00000261609.3	389.89560	555.98540	-0.51200	3.08680	2.46130	HepG2	EIF2S1
GAN	ENSG00000261609.3	469.09550	628.16220	-0.42130	3.99950	3.02640	HepG2	EIF4G1
GAN	ENSG00000261609.3	437.17560	601.76230	-0.46100	3.28980	2.40550	HepG2	EIF4G2
GAN	ENSG00000261609.3	448.91530	279.61250	0.68290	5.11260	4.05500	HepG2	FUBP3
GAN	ENSG00000261609.3	409.88430	575.06750	-0.48850	2.84400	2.16980	HepG2	G3BP1
GAN	ENSG00000261609.3	503.68860	718.79840	-0.51310	2.67950	1.58590	HepG2	GRSF1
GAN	ENSG00000261609.3	217.34400	540.54290	-1.31440	16.27020	14.91460	HepG2	HNRNPA1
GAN	ENSG00000261609.3	399.90710	601.24580	-0.58830	4.51490	3.64360	HepG2	HNRNPC
GAN	ENSG00000261609.3	785.50370	582.15300	0.43210	2.97750	2.25350	HepG2	HNRNPK
GAN	ENSG00000261609.3	316.33530	597.27140	-0.91690	14.05030	12.77390	HepG2	HNRNPU
GAN	ENSG00000261609.3	503.89290	697.11270	-0.46830	2.51950	1.35020	HepG2	HSPD1
GAN	ENSG00000261609.3	435.61880	610.09430	-0.48600	5.34160	4.34880	HepG2	ILF2
GAN	ENSG00000261609.3	497.50360	696.47300	-0.48540	2.48480	1.31170	HepG2	KRR1
GAN	ENSG00000261609.3	1031.98590	623.55610	0.72670	6.51860	5.58230	HepG2	MATR3
GAN	ENSG00000261609.3	286.86290	463.31610	-0.69160	3.45330	2.36310	HepG2	MTPAP
GAN	ENSG00000261609.3	1363.64660	638.26100	1.09520	15.54410	14.12630	HepG2	NCBP2
GAN	ENSG00000261609.3	285.62410	446.53700	-0.64470	2.36270	1.36020	HepG2	NONO
GAN	ENSG00000261609.3	1414.56020	709.71060	0.99500	4.84790	3.64670	HepG2	PABPC1
GAN	ENSG00000261609.3	381.17760	591.20660	-0.63320	7.10440	5.84820	HepG2	PARN
GAN	ENSG00000261609.3	195.87670	275.78900	-0.49360	2.50520	1.33960	HepG2	PKM
GAN	ENSG00000261609.3	328.97110	532.71980	-0.69540	7.45910	6.29150	HepG2	PPIL4
GAN	ENSG00000261609.3	726.51760	480.75290	0.59560	6.93120	5.76980	HepG2	PRPF4
GAN	ENSG00000261609.3	427.21370	589.85040	-0.46540	3.07730	2.43570	HepG2	PUS1
GAN	ENSG00000261609.3	1468.88620	774.51350	0.92330	21.98340	20.80510	HepG2	RBM22
GAN	ENSG00000261609.3	877.48240	575.18040	0.60930	5.80950	4.86440	HepG2	RBM25
GAN	ENSG00000261609.3	410.16440	779.73070	-0.92680	8.01840	6.67660	HepG2	RPS3A
GAN	ENSG00000261609.3	267.19250	531.90140	-0.99330	14.65880	13.35220	HepG2	SAFB2
GAN	ENSG00000261609.3	481.03610	740.69730	-0.62270	3.41580	1.69190	HepG2	SBDS
GAN	ENSG00000261609.3	1183.33110	629.02500	0.91160	8.18630	6.98010	HepG2	SF3A3
GAN	ENSG00000261609.3	779.10750	609.25160	0.35470	2.95560	2.34840	HepG2	SF3B4
GAN	ENSG00000261609.3	430.70950	620.29500	-0.52620	6.06650	5.17230	HepG2	SMN1
GAN	ENSG00000261609.3	717.00660	500.29260	0.51910	2.47510	1.73700	HepG2	SNRNP70
GAN	ENSG00000261609.3	1500.58550	874.80850	0.77840	20.28530	19.25560	HepG2	SRFBP1
GAN	ENSG00000261609.3	880.43110	483.81890	0.86360	7.52320	5.80660	HepG2	SRSF3
GAN	ENSG00000261609.3	784.59920	517.34940	0.60070	8.39730	7.52790	HepG2	SRSF9
GAN	ENSG00000261609.3	515.20950	676.83200	-0.39360	3.96520	3.24420	HepG2	SUCLG1
GAN	ENSG00000261609.3	905.12000	571.57190	0.66310	9.28920	8.35760	HepG2	TAF15
GAN	ENSG00000261609.3	300.82990	442.79740	-0.55770	3.43200	2.63430	HepG2	TARDBP
GAN	ENSG00000261609.3	405.05140	682.00750	-0.75170	3.14910	2.01130	HepG2	TBRG4
GAN	ENSG00000261609.3	301.53330	580.39140	-0.94470	12.16740	11.24830	HepG2	TIAL1
GAN	ENSG00000261609.3	271.72800	585.54670	-1.10760	18.74860	17.44860	HepG2	TRIM56
GAN	ENSG00000261609.3	828.17960	461.57950	0.84330	9.88670	8.68610	HepG2	U2AF1
GAN	ENSG00000261609.3	1002.40110	538.58330	0.89610	18.45810	17.12020	HepG2	UTP3
GAN	ENSG00000261609.3	330.73560	476.72550	-0.52750	2.43750	1.75340	HepG2	XRN2
GAN	ENSG00000261609.3	480.87890	613.52820	-0.35150	2.21350	1.70900	HepG2	ZNF622
GAN	ENSG00000261609.3	798.98600	995.32820	-0.31700	2.81620	2.24340	K562	AGGF1
GAN	ENSG00000261609.3	851.40030	1098.90930	-0.36820	2.97310	1.68650	K562	APOBEC3C
GAN	ENSG00000261609.3	1421.84000	958.29050	0.56910	6.20090	5.38220	K562	AQR
GAN	ENSG00000261609.3	767.12840	1005.68910	-0.39060	2.99180	1.65580	K562	CIRBP
GAN	ENSG00000261609.3	563.73470	877.21350	-0.63790	3.38600	2.18800	K562	CNOT7
GAN	ENSG00000261609.3	542.16150	715.93180	-0.40110	3.50520	2.13870	K562	DDX21
GAN	ENSG00000261609.3	1334.48100	1114.41340	0.25990	2.61950	1.77150	K562	DKC1
GAN	ENSG00000261609.3	475.84720	630.06550	-0.40500	3.36860	2.58760	K562	EIF2S2
GAN	ENSG00000261609.3	1299.68220	845.56710	0.62010	7.61700	6.25710	K562	EIF4A3
GAN	ENSG00000261609.3	1025.65430	1245.39260	-0.28010	2.42130	1.53880	K562	EIF4G2
GAN	ENSG00000261609.3	474.03010	634.56160	-0.42080	3.17640	1.81180	K562	EXOSC5
GAN	ENSG00000261609.3	381.27380	703.48680	-0.88370	10.14430	8.40710	K562	FIP1L1
GAN	ENSG00000261609.3	602.65250	839.60930	-0.47840	3.90920	3.01450	K562	GRSF1
GAN	ENSG00000261609.3	971.98470	620.15290	0.64820	2.52080	1.37310	K562	HNRNPA2B1
GAN	ENSG00000261609.3	327.01640	489.48530	-0.58190	4.20040	2.76050	K562	HNRNPF
GAN	ENSG00000261609.3	737.69970	926.17330	-0.32820	2.40090	1.42390	K562	HNRNPL
GAN	ENSG00000261609.3	363.46260	578.65380	-0.67090	4.76250	3.50950	K562	HNRNPM
GAN	ENSG00000261609.3	500.57510	694.55030	-0.47250	4.58450	3.43030	K562	HNRNPU
GAN	ENSG00000261609.3	621.62140	953.74240	-0.61760	5.97060	4.81500	K562	HSPD1
GAN	ENSG00000261609.3	634.06010	954.17550	-0.58960	6.25110	4.34980	K562	IGF2BP3
GAN	ENSG00000261609.3	353.18960	488.73670	-0.46860	2.94590	1.36550	K562	LSM11
GAN	ENSG00000261609.3	1613.00480	1231.26700	0.38950	3.94330	2.82670	K562	MBNL1
GAN	ENSG00000261609.3	244.77420	413.91220	-0.75790	5.94990	4.63700	K562	METAP2
GAN	ENSG00000261609.3	487.41070	754.83150	-0.63100	5.84150	4.69650	K562	MTPAP
GAN	ENSG00000261609.3	598.07650	838.63390	-0.48770	6.53840	5.45610	K562	NSUN2
GAN	ENSG00000261609.3	1223.22900	877.51280	0.47910	4.62850	3.35850	K562	PCBP2
GAN	ENSG00000261609.3	965.96690	1279.67990	-0.40570	3.87670	2.19000	K562	PNPT1
GAN	ENSG00000261609.3	515.52610	798.63400	-0.63150	6.01510	4.72500	K562	PPIG
GAN	ENSG00000261609.3	2061.02150	1358.81540	0.60090	7.73610	6.36660	K562	PUF60
GAN	ENSG00000261609.3	752.89260	1027.04700	-0.44800	3.46030	2.86330	K562	PUS1
GAN	ENSG00000261609.3	281.15450	448.38000	-0.67340	5.25910	3.88520	K562	RCC2
GAN	ENSG00000261609.3	553.52700	885.08740	-0.67720	7.54740	4.68420	K562	RECQL
GAN	ENSG00000261609.3	1205.10740	495.83340	1.28110	6.71260	4.57670	K562	SF1
GAN	ENSG00000261609.3	696.27150	886.87550	-0.34910	2.36870	1.40910	K562	SRSF5
GAN	ENSG00000261609.3	654.30630	950.62520	-0.53890	4.79310	3.85200	K562	TARDBP
GAN	ENSG00000261609.3	581.38960	916.95820	-0.65740	7.69420	6.22410	K562	TIA1
GAN	ENSG00000261609.3	332.38650	472.72050	-0.50810	2.83380	1.88630	K562	TIAL1
GAN	ENSG00000261609.3	334.46220	502.17360	-0.58630	2.24310	1.40410	K562	TRIM56
GAN	ENSG00000261609.3	511.68340	889.22540	-0.79730	14.28770	12.80950	K562	UPF1
GAN	ENSG00000261609.3	920.16790	665.75060	0.46680	4.42360	2.29090	K562	UPF2
GAN	ENSG00000261609.3	604.61500	760.87540	-0.33160	2.25760	1.46780	K562	WDR3
GAN	ENSG00000261609.3	586.25730	791.26810	-0.43260	4.94710	3.84520	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GAN is not available on ENCORE database.

1 RBPs can affect the splicing of GAN :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
A3SS	GAN	ENSG00000261609.3	chr16	+	81397377	81397548			81397398	81397548	81396103	81396216	0.11000	0.01809	0.08752	longer	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GAN

General Information

Functions

Localization

Domains (AlphaFold: GAN)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GAN is not avaliable on ENCORE database.

12 proteins are bound to GAN RNA:

eCLIP assay for GAN is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GAN is not available on ENCORE database.

92 RBPs can affect the gene expression of GAN :

The Knockdown/knockout RNA-Seq assay for GAN is not available on ENCORE database.

1 RBPs can affect the splicing of GAN :

The Knockdown/knockout RNA-Seq assay for GAN is not avaliable on ENCORE database.