FOXP4

General Information

Gene Name : FOXP4
Gene ID : ENSG00000137166.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FOXP4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FOXP4	ENSG00000137166.14	1.18	4.27	2.72	ENCSR000AEF
HepG2	FOXP4	ENSG00000137166.14	35.28	9.74	22.51	ENCSR985KAT
K562	FOXP4	ENSG00000137166.14	9.95	3.97	6.96	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FOXP4 is not avaliable on ENCORE database.

Proteins bound to RNA

FOXP4 RNA is bound by 43 proteins.

CanvasJS.com

eCLIP assay for FOXP4 is not avaliable on ENCORE database.

43 proteins are bound to FOXP4 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	41556472	41556528	+	intron-Proximal	5.26115	69.68192	HepG2	PRPF8
chr6	41556461	41556472	+	CDS,intron-Proximal	5.17646	66.98775	HepG2	PRPF8
chr6	41553302	41553312	+	intron-Proximal	5.78419	51.92617	HepG2	RBM22
chr6	41553276	41553302	+	intron-Proximal	6.09706	44.56465	HepG2	RBM22
chr6	41567612	41567673	+	3'-UTR	5.05857	44.47241	HepG2	PCBP2
chr6	41545855	41545916	+	intron-Proximal	5.00305	43.15700	HepG2	RBM22
chr6	41567716	41567792	+	3'-UTR	5.34872	42.17612	HepG2	PCBP2
chr6	41553312	41553323	+	intron-Proximal	5.39236	40.88117	HepG2	RBM22
chr6	41567557	41567612	+	3'-UTR	4.53496	40.77155	HepG2	PCBP2
chr6	41545794	41545863	+	CDS,intron-Proximal	4.36803	40.25901	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 247 entries

eCLIP assay for FOXP4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FOXP4 is not available on ENCORE database.
100 RBPs can affect the levels of FOXP4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FOXP4 is not available on ENCORE database.

100 RBPs can affect the gene expression of FOXP4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FOXP4	ENSG00000137166.10	3136.16440	1759.46460	0.83380	38.45410	36.48660	HepG2	SLBP
FOXP4	ENSG00000137166.10	3021.58420	1437.77830	1.07140	26.83020	25.29970	HepG2	TRIM56
FOXP4	ENSG00000137166.10	1276.73190	542.73900	1.23400	25.40560	23.67460	K562	HNRNPC
FOXP4	ENSG00000137166.10	2180.99990	3405.32890	-0.64280	21.83880	20.78000	HepG2	SRFBP1
FOXP4	ENSG00000137166.10	2665.20820	1303.20140	1.03210	20.81750	19.18340	HepG2	DNAJC2
FOXP4	ENSG00000137166.10	3945.21590	2360.18320	0.74110	20.34830	18.64860	HepG2	HNRNPF
FOXP4	ENSG00000137166.10	2524.62850	1424.72600	0.82530	19.72860	18.61650	HepG2	TIAL1
FOXP4	ENSG00000137166.10	4638.68860	2542.63710	0.86730	18.01640	16.57360	HepG2	RPLP0
FOXP4	ENSG00000137166.10	3027.15910	2060.40890	0.55490	17.20580	15.86680	HepG2	SUCLG1
FOXP4	ENSG00000137166.10	476.39800	204.76540	1.21810	15.17030	13.13580	K562	TIA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 119 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FOXP4 is not available on ENCORE database.

12 RBPs can affect the splicing of FOXP4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	FOXP4	ENSG00000137166.10	chr6	+	41557700	41557908			41557736	41557908	41557508	41557592	-0.32200	0.00000	0.00217	shorter	HepG2	MATR3
A3SS	FOXP4	ENSG00000137166.10	chr6	+	41557700	41557908			41557736	41557908	41557508	41557592	0.22900	0.00000	0.00358	longer	HepG2	PRPF4
A3SS	FOXP4	ENSG00000137166.10	chr6	+	41557700	41557908			41557736	41557908	41557508	41557592	-0.36400	0.00000	0.01051	shorter	HepG2	GRSF1
A3SS	FOXP4	ENSG00000137166.10	chr6	+	41557700	41557908			41557736	41557908	41557508	41557592	-0.44800	0.00000	0.00045	shorter	HepG2	HNRNPC
MXE	FOXP4	ENSG00000137166.10	chr6	+	41564913	41564980	41565518	41565688	41562607	41562729	41566526	41568364	-0.17000	0.00000	0.00014	2included	HepG2	PTBP1
MXE	FOXP4	ENSG00000137166.10	chr6	+	41564913	41564980	41565518	41565688	41562607	41562729	41566526	41568364	-0.25700	0.00000	0.00000	2included	HepG2	XPO5
MXE	FOXP4	ENSG00000137166.10	chr6	+	41564913	41564980	41565518	41565688	41562607	41562729	41566526	41568364	-0.15500	0.00000	0.00047	2included	HepG2	PCBP1
MXE	FOXP4	ENSG00000137166.10	chr6	+	41564913	41564980	41565518	41565688	41562607	41562729	41566526	41568364	-0.17300	0.00003	0.00364	2included	HepG2	NOL12
A3SS	FOXP4	ENSG00000137166.10	chr6	+	41557700	41557908			41557736	41557908	41557508	41557592	-0.27200	0.00008	0.02513	shorter	HepG2	NCBP2
A3SS	FOXP4	ENSG00000137166.10	chr6	+	41557700	41557908			41557736	41557908	41557508	41557592	-0.34100	0.00012	0.08520	shorter	HepG2	HNRNPA1

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FOXP4

General Information

Functions

Localization

Domains (AlphaFold: FOXP4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FOXP4 is not avaliable on ENCORE database.

43 proteins are bound to FOXP4 RNA:

eCLIP assay for FOXP4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FOXP4 is not available on ENCORE database.

100 RBPs can affect the gene expression of FOXP4 :

The Knockdown/knockout RNA-Seq assay for FOXP4 is not available on ENCORE database.

12 RBPs can affect the splicing of FOXP4 :

The Knockdown/knockout RNA-Seq assay for FOXP4 is not avaliable on ENCORE database.