FN3K

General Information

Gene Name : FN3K
Gene ID : ENSG00000167363.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FN3K)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FN3K	ENSG00000167363.13	0.00	0.00	0.00	ENCSR000AEF
HepG2	FN3K	ENSG00000167363.13	37.66	19.10	28.38	ENCSR985KAT
K562	FN3K	ENSG00000167363.13	7.69	5.77	6.73	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FN3K is not avaliable on ENCORE database.

Proteins bound to RNA

FN3K RNA is bound by 31 proteins.

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eCLIP assay for FN3K is not avaliable on ENCORE database.

31 proteins are bound to FN3K RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	80708717	80708778	+	3'-UTR	6.60764	400.00000	HepG2	HNRNPK
chr17	80708979	80709061	+	3'-UTR	8.19513	256.35762	HepG2	DDX59
chr17	80708636	80708780	+	3'-UTR	7.98803	190.38012	HepG2	PCBP2
chr17	80708695	80708774	+	3'-UTR	8.12749	162.18131	HepG2	DDX59
chr17	80708884	80708966	+	3'-UTR	7.64445	122.11660	HepG2	DDX59
chr17	80708787	80708865	+	3'-UTR	8.42112	110.95435	HepG2	DDX59
chr17	80708995	80709060	+	3'-UTR	8.03561	101.91690	HepG2	PCBP2
chr17	80708645	80708717	+	3'-UTR	6.34906	83.95845	HepG2	HNRNPK
chr17	80708888	80708966	+	3'-UTR	7.05763	81.69293	HepG2	PCBP2
chr17	80708883	80708976	+	3'-UTR	6.08494	61.97547	HepG2	HNRNPK
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 90 entries

eCLIP assay for FN3K is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FN3K is not available on ENCORE database.
109 RBPs can affect the levels of FN3K.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FN3K is not available on ENCORE database.

109 RBPs can affect the gene expression of FN3K :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FN3K	ENSG00000167363.9	319.76580	1026.19460	-1.68220	55.09580	53.60060	HepG2	SRFBP1
FN3K	ENSG00000167363.9	896.54300	299.23050	1.58300	37.25510	35.80620	HepG2	TIAL1
FN3K	ENSG00000167363.9	448.90030	908.58770	-1.01720	18.52950	17.42990	HepG2	RBM22
FN3K	ENSG00000167363.9	937.64280	510.98520	0.87570	16.71430	15.14700	HepG2	HNRNPF
FN3K	ENSG00000167363.9	359.35910	679.33500	-0.91870	15.99900	14.79260	HepG2	ACO1
FN3K	ENSG00000167363.9	969.94150	503.17230	0.94670	15.82590	14.24910	HepG2	IGF2BP1
FN3K	ENSG00000167363.9	709.79490	330.39450	1.10310	15.04370	13.73740	K562	HNRNPC
FN3K	ENSG00000167363.9	471.64270	813.04960	-0.78560	11.84010	11.00790	HepG2	SRSF1
FN3K	ENSG00000167363.9	1367.85520	740.40580	0.88540	10.61840	9.41750	HepG2	NCBP2
FN3K	ENSG00000167363.9	1311.49240	890.94170	0.55770	9.81010	8.95900	HepG2	SSB
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 125 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FN3K is not available on ENCORE database.

1 RBPs can affect the splicing of FN3K :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
MXE	FN3K	ENSG00000167363.9	chr17	+	80699186	80699269	80706730	80706853	80698638	80698730	80708292	80709073	-0.18100	0.00425	0.07840	2included	K562	TARDBP

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FN3K

General Information

Functions

Localization

Domains (AlphaFold: FN3K)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FN3K is not avaliable on ENCORE database.

31 proteins are bound to FN3K RNA:

eCLIP assay for FN3K is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FN3K is not available on ENCORE database.

109 RBPs can affect the gene expression of FN3K :

The Knockdown/knockout RNA-Seq assay for FN3K is not available on ENCORE database.

1 RBPs can affect the splicing of FN3K :

The Knockdown/knockout RNA-Seq assay for FN3K is not avaliable on ENCORE database.