FKBP1A

General Information

Gene Name : FKBP1A
Gene ID : ENSG00000088832.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FKBP1A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FKBP1A	ENSG00000088832.16	484.84	467.57	476.20	ENCSR000AEF
HepG2	FKBP1A	ENSG00000088832.16	397.99	416.31	407.15	ENCSR985KAT
K562	FKBP1A	ENSG00000088832.16	326.12	337.86	331.99	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FKBP1A is not avaliable on ENCORE database.

Proteins bound to RNA

FKBP1A RNA is bound by 21 proteins.

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eCLIP assay for FKBP1A is not avaliable on ENCORE database.

21 proteins are bound to FKBP1A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	1349722	1349794	-	3'-UTR,intron-Distal	4.13442	73.55443	HepG2	PCBP2
chr20	1349675	1349817	-	3'-UTR,intron-Distal	4.04689	63.92727	HepG2	DDX55
chr20	1372339	1372491	-	intron-Distal	5.52408	61.97790	HepG2	PCBP2
chr20	1349692	1349705	-	3'-UTR,intron-Distal	4.43504	42.98197	HepG2	PCBP2
chr20	1350521	1350586	-	3'-UTR,intron-Distal,intron-Proximal	4.25952	42.54079	HepG2	PCBP2
chr20	1349670	1349692	-	3'-UTR,intron-Distal	4.48466	37.76886	HepG2	PCBP2
chr20	1349721	1349809	-	3'-UTR,intron-Distal	3.17881	36.87423	HepG2	LARP4
chr20	1349681	1349796	-	3'-UTR,intron-Distal	4.34368	35.02507	K562	PCBP1
chr20	1373632	1373755	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.78321	25.84412	HepG2	DDX3X
chr20	1373324	1373405	-	intron-Distal,intron-Proximal	4.56536	22.82261	HepG2	EFTUD2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 55 entries

eCLIP assay for FKBP1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FKBP1A is not available on ENCORE database.
96 RBPs can affect the levels of FKBP1A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FKBP1A is not available on ENCORE database.

96 RBPs can affect the gene expression of FKBP1A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FKBP1A	ENSG00000088832.10	2779.23790	5680.19140	-1.03130	59.84220	57.96100	HepG2	SRSF9
FKBP1A	ENSG00000088832.10	3668.98750	6958.16300	-0.92330	33.39400	31.61020	HepG2	QKI
FKBP1A	ENSG00000088832.10	7830.87200	5173.05800	0.59810	31.64940	30.31750	HepG2	ZNF622
FKBP1A	ENSG00000088832.10	1378.17800	2901.50400	-1.07400	28.10800	26.28740	K562	HNRNPC
FKBP1A	ENSG00000088832.10	5312.27060	3219.27160	0.72250	27.81420	26.11340	K562	AGGF1
FKBP1A	ENSG00000088832.10	7072.40040	4646.63980	0.60590	24.97850	23.56590	HepG2	ACO1
FKBP1A	ENSG00000088832.10	4380.39270	6659.51850	-0.60440	21.61340	20.17150	HepG2	RECQL
FKBP1A	ENSG00000088832.10	2298.24330	3936.64090	-0.77640	22.01050	19.65710	K562	HNRNPU
FKBP1A	ENSG00000088832.10	1578.79730	3902.54390	-1.30560	22.25280	19.29780	HepG2	DDX27
FKBP1A	ENSG00000088832.10	4796.97620	7150.20060	-0.57590	19.35180	18.17330	HepG2	NELFE
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 120 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FKBP1A is not available on ENCORE database.

12 RBPs can affect the splicing of FKBP1A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	FKBP1A	ENSG00000088832.10	chr20	-	1356134	1356247			1352755	1352884	1373477	1373525	-0.14900	0.00000	0.00000	excluded	HepG2	U2AF2
RI	FKBP1A	ENSG00000088832.10	chr20	-	1349621	1350716			1349621	1349683	1350415	1350716	-0.15600	0.00000	0.00674	excluded	K562	EWSR1
MXE	FKBP1A	ENSG00000088832.10	chr20	-	1352719	1352884	1356134	1356247	1349621	1350716	1373477	1373525	0.13400	0.00001	0.00107	1included	K562	HNRNPU
RI	FKBP1A	ENSG00000088832.10	chr20	-	1349621	1350716			1349621	1349683	1350415	1350716	-0.08500	0.00013	0.04870	excluded	HepG2	GRSF1
RI	FKBP1A	ENSG00000088832.10	chr20	-	1349621	1350716			1349621	1349683	1350415	1350716	-0.10100	0.00024	0.06218	excluded	K562	DDX24
RI	FKBP1A	ENSG00000088832.10	chr20	-	1349621	1350716			1349621	1349683	1350415	1350716	0.05300	0.00031	0.00342	included	HepG2	U2AF2
RI	FKBP1A	ENSG00000088832.10	chr20	-	1349621	1350716			1349621	1349683	1350415	1350716	0.08300	0.00058	0.02535	included	K562	SF3B1
RI	FKBP1A	ENSG00000088832.10	chr20	-	1349621	1350716			1349621	1349683	1350415	1350716	0.06200	0.00089	0.01683	included	HepG2	SRSF9
RI	FKBP1A	ENSG00000088832.10	chr20	-	1349621	1350716			1349621	1349683	1350415	1350716	-0.07900	0.00141	0.07161	excluded	HepG2	SUPV3L1
RI	FKBP1A	ENSG00000088832.10	chr20	-	1349621	1350716			1349621	1349683	1350415	1350716	-0.05400	0.00180	0.09182	excluded	K562	FXR2

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FKBP1A

General Information

Functions

Localization

Domains (AlphaFold: FKBP1A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FKBP1A is not avaliable on ENCORE database.

21 proteins are bound to FKBP1A RNA:

eCLIP assay for FKBP1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FKBP1A is not available on ENCORE database.

96 RBPs can affect the gene expression of FKBP1A :

The Knockdown/knockout RNA-Seq assay for FKBP1A is not available on ENCORE database.

12 RBPs can affect the splicing of FKBP1A :

The Knockdown/knockout RNA-Seq assay for FKBP1A is not avaliable on ENCORE database.