FAM175A

General Information

Gene Name : FAM175A
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FAM175A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FAM175A is not avaliable on ENCORE database.

Proteins bound to RNA

FAM175A RNA is bound by 7 proteins.

CanvasJS.com

eCLIP assay for FAM175A is not avaliable on ENCORE database.

7 proteins are bound to FAM175A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	84382389	84382463	-	3'-UTR,intron-Distal	4.45680	18.70653	K562	YBX3
chr4	84406227	84406245	-	5'-UTR,intron-Distal,intron-Proximal	6.14876	11.52680	K562	TROVE2
chr4	84406190	84406227	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.68601	10.61341	K562	TROVE2
chr4	84383479	84383578	-	3'-UTR,intron-Distal	5.16867	6.23813	HepG2	SUB1
chr4	84406027	84406109	-	intron-Distal	5.69192	6.11439	HepG2	XRN2
chr4	84382737	84382814	-	3'-UTR,intron-Distal	4.82123	5.29045	K562	IGF2BP1
chr4	84382849	84382974	-	3'-UTR,intron-Distal	3.43448	5.08461	K562	IGF2BP1
chr4	84382171	84382228	-	3'-UTR,intron-Distal	4.14153	4.72754	K562	YBX3
chr4	84383271	84383402	-	3'-UTR,intron-Distal	4.74757	4.31786	K562	IGF2BP2
chr4	84393390	84393435	-	3'-UTR,CDS,intron-Distal	4.79854	4.03091	K562	TROVE2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 14 entries

eCLIP assay for FAM175A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FAM175A is not available on ENCORE database.
104 RBPs can affect the levels of FAM175A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FAM175A is not available on ENCORE database.

104 RBPs can affect the gene expression of FAM175A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FAM175A	ENSG00000163322.9	493.23940	1759.41100	-1.83470	61.77780	58.76110	K562	SRSF1
FAM175A	ENSG00000163322.9	738.11340	1794.73210	-1.28190	35.32120	33.05420	K562	PTBP1
FAM175A	ENSG00000163322.9	572.68110	1433.97410	-1.32420	30.83840	28.92340	K562	HNRNPC
FAM175A	ENSG00000163322.9	665.32750	1643.66240	-1.30480	30.25940	27.11090	K562	PCBP2
FAM175A	ENSG00000163322.9	156.99790	474.38430	-1.59530	24.65110	23.44060	HepG2	TIAL1
FAM175A	ENSG00000163322.9	801.39020	1538.98170	-0.94140	23.45940	21.81650	K562	FXR1
FAM175A	ENSG00000163322.9	444.70550	1134.43260	-1.35100	23.72540	21.51490	K562	PRPF8
FAM175A	ENSG00000163322.9	373.41760	808.23390	-1.11400	22.31480	21.24810	HepG2	SRSF1
FAM175A	ENSG00000163322.9	140.80690	454.85480	-1.69170	21.72800	20.30160	HepG2	BOP1
FAM175A	ENSG00000163322.9	479.20240	1165.77520	-1.28260	22.84960	19.80180	K562	EFTUD2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 127 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FAM175A is not available on ENCORE database.

12 RBPs can affect the splicing of FAM175A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	FAM175A	ENSG00000163322.9	chr4	-	84405144	84405319			84403306	84403397	84406138	84406256	0.24000	0.00000	0.00000	included	K562	HNRNPU
SE	FAM175A	ENSG00000163322.9	chr4	-	84405144	84405319			84403306	84403397	84406138	84406256	0.17300	0.00002	0.00321	included	K562	SUPV3L1
SE	FAM175A	ENSG00000163322.9	chr4	-	84405144	84405319			84403306	84403397	84406138	84406256	0.20900	0.00011	0.04613	included	HepG2	XRN2
SE	FAM175A	ENSG00000163322.9	chr4	-	84405144	84405319			84403306	84403397	84406138	84406256	0.12600	0.00026	0.01308	included	K562	TARDBP
SE	FAM175A	ENSG00000163322.9	chr4	-	84405144	84405319			84403306	84403397	84406138	84406256	0.24100	0.00030	0.01716	included	HepG2	HNRNPU
SE	FAM175A	ENSG00000163322.9	chr4	-	84405144	84405319			84403306	84403397	84406138	84406256	-0.08700	0.00036	0.02102	excluded	K562	HNRNPK
MXE	FAM175A	ENSG00000163322.9	chr4	-	84388606	84388691	84390184	84390304	84384646	84384761	84391355	84391549	0.19500	0.00040	0.02988	1included	HepG2	AKAP1
SE	FAM175A	ENSG00000163322.9	chr4	-	84393374	84393441			84391355	84391549	84397795	84397832	-0.28600	0.00050	0.01758	excluded	HepG2	SF3A3
SE	FAM175A	ENSG00000163322.9	chr4	-	84393374	84393441			84391355	84391549	84397795	84397832	-0.16600	0.00103	0.01442	excluded	HepG2	U2AF2
SE	FAM175A	ENSG00000163322.9	chr4	-	84393374	84393441			84391355	84391549	84397795	84397832	-0.13400	0.00139	0.02537	excluded	K562	HNRNPC

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FAM175A

General Information

Functions

Localization

Domains (AlphaFold: FAM175A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FAM175A is not avaliable on ENCORE database.

7 proteins are bound to FAM175A RNA:

eCLIP assay for FAM175A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FAM175A is not available on ENCORE database.

104 RBPs can affect the gene expression of FAM175A :

The Knockdown/knockout RNA-Seq assay for FAM175A is not available on ENCORE database.

12 RBPs can affect the splicing of FAM175A :

The Knockdown/knockout RNA-Seq assay for FAM175A is not avaliable on ENCORE database.