ERI3

General Information

Gene Name       : ERI3
Gene ID             : ENSG00000117419.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ERI3)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ERI3ENSG00000117419.1513.7021.4317.56ENCSR000AEF
HepG2ERI3ENSG00000117419.1529.0021.9625.48ENCSR985KAT
K562ERI3ENSG00000117419.1562.8749.0155.94ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ERI3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • ERI3 RNA is bound by 35 proteins.  







eCLIP assay for ERI3 is not avaliable on ENCORE database.





35 proteins are bound to ERI3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr14468692244687007-3'-UTR,intron-Distal,intron-Proximal5.683036.75862K562PCBP1
chr14468687944686920-3'-UTR,intron-Distal3.025643.07714K562YBX3
chr14468681044686879-3'-UTR,intron-Distal3.232485.38711K562YBX3
chr14468694744686999-3'-UTR,intron-Distal3.302493.86052K562YBX3
chr14468692944687003-3'-UTR,intron-Distal,intron-Proximal4.136676.14808K562UPF1
chr14468679044686909-3'-UTR,intron-Distal3.590648.73107K562UPF1
chr14468678544686828-3'-UTR,intron-Distal4.0920410.75945K562PABPC4
chr14478537044785413-5'-UTR,CDS,intron-Distal3.045206.82055K562YBX3
chr14482081344820872-5'-UTR,intron-Distal5.140049.48522K562RBFOX2
chr14482079944820917-5'-UTR,intron-Distal,intron-Proximal5.253388.61209HepG2NCBP2
chr14482082744820926-5'-UTR,intron-Distal,intron-Proximal4.153076.39176K562AQR
chr14478536344785413-5'-UTR,CDS,intron-Distal3.357463.59112HepG2PPIG
chr14482070144820894-5'-UTR,intron-Distal,intron-Proximal4.111096.05537HepG2DDX3X
chr14482070744820761-5'-UTR,intron-Distal4.414575.04056HepG2RBFOX2
chr14477398144774032-CDS,intron-Distal,intron-Proximal3.203703.94979HepG2BCLAF1
chr14477888044778901-CDS,intron-Distal,intron-Proximal4.155358.73210K562PUM2
chr14478529644785341-CDS,intron-Distal,intron-Proximal4.1734312.74514K562PUM2
chr14471370544713763-CDS,intron-Distal,intron-Proximal4.869655.13952K562SF3B4
chr14482053144820589-CDS,intron-Distal5.4072811.74926K562RBFOX2
chr14478529944785370-CDS,intron-Distal,intron-Proximal3.183169.49523K562YBX3
chr14477883944778889-CDS,intron-Distal,intron-Proximal3.245646.00907HepG2PPIG
chr14477398544774074-CDS,intron-Distal,intron-Proximal3.149363.60157HepG2GRWD1
chr14475054344750587-CDS,intron-Distal,intron-Proximal3.637114.36528HepG2U2AF2
chr14477404944774073-CDS,intron-Distal3.584683.86355HepG2PPIG
chr14475055044750619-CDS,intron-Distal,intron-Proximal5.077076.44303K562AQR
chr14477888944778900-CDS,intron-Distal4.291414.55095K562YBX3
chr14477397844774031-CDS,intron-Distal,intron-Proximal3.584687.64107HepG2PPIG
chr14477398144774025-CDS,intron-Distal,intron-Proximal3.548264.49347K562UCHL5
chr14482053944820591-CDS,intron-Distal3.899285.55843HepG2RBFOX2
chr14481217144812217-intron-Distal3.583023.72952K562EXOSC5
chr14474758644747690-intron-Distal3.3695912.77052K562AGGF1
chr14481951444819582-intron-Distal4.217073.14375HepG2RBFOX2
chr14474763844747683-intron-Distal3.197924.03313K562HNRNPL
chr14480912344809182-intron-Distal3.385063.72904K562EXOSC5
chr14481783844817911-intron-Distal3.310564.13258K562RBFOX2
chr14481120544811269-intron-Distal4.410324.56666K562HNRNPM
chr14481144844811498-intron-Distal5.133517.71312K562EXOSC5
chr14479487644794920-intron-Distal3.955193.07980HepG2HNRNPM
chr14482045844820538-intron-Distal3.288113.47285K562PRPF8
chr14482054744820564-intron-Distal3.998104.49024K562AQR
chr14470698544707084-intron-Distal3.509486.81502K562EIF4G2
chr14482012344820171-intron-Distal3.639285.63113K562RBFOX2
chr14469884144698915-intron-Distal3.632643.00058K562HNRNPU
chr14471087344710942-intron-Distal3.398413.46580HepG2CSTF2T
chr14472712844727204-intron-Distal4.928284.67693K562PTBP1
chr14481111044811166-intron-Distal3.655044.02190K562EXOSC5
chr14482046244820539-intron-Distal6.5437623.15008HepG2RBFOX2
chr14471086344710928-intron-Distal4.252243.90256HepG2PRPF4
chr14482048344820506-intron-Distal4.682935.91582K562NONO
chr14472437044724467-intron-Distal3.265743.10961HepG2MATR3
chr14474361444743673-intron-Distal4.387425.84425HepG2CSTF2
chr14474752744747579-intron-Distal5.3863311.41394K562HNRNPL
chr14474755944747631-intron-Distal4.9250811.27642HepG2HNRNPL
chr14474745644747558-intron-Distal5.6406814.16307HepG2HNRNPL
chr14471058044710675-intron-Distal3.205393.00054HepG2PRPF4
chr14482029644820416-intron-Distal3.9898713.97852K562RBFOX2
chr14481184344811876-intron-Distal3.159233.53873HepG2HNRNPM
chr14471155244711666-intron-Distal4.305934.66266K562TARDBP
chr14471085844710913-intron-Distal3.154873.17504K562CSTF2T
chr14480883244808869-intron-Distal3.604974.28420HepG2HNRNPM
chr14470737744707442-intron-Distal3.920416.50638K562EIF4G2
chr14482045444820531-intron-Distal5.0142322.53814K562RBFOX2
chr14473623744736247-intron-Distal4.479053.01755HepG2XRCC6
chr14481011444810230-intron-Distal3.346053.72904K562EXOSC5
chr14479508844795144-intron-Distal4.988767.71416K562EXOSC5
chr14481062744810758-intron-Distal4.789036.93487K562ILF3
chr14469369644693851-intron-Distal3.414644.98844HepG2FAM120A
chr14471271444712845-intron-Distal4.5464412.14339K562TARDBP
chr14471086344710914-intron-Distal4.813346.41765K562GTF2F1
chr14474763144747687-intron-Distal4.999197.76609HepG2HNRNPL
chr14475033944750431-intron-Distal,intron-Proximal5.640089.27567K562PTBP1
chr14481188044811942-intron-Distal4.6117510.29529K562EXOSC5
chr14479384444793894-intron-Distal4.068453.59909K562EXOSC5
chr14482044344820483-intron-Distal3.892223.31905K562NONO
chr14479606944796126-intron-Distal4.606375.94008HepG2HNRNPM
chr14474745044747528-intron-Distal4.097254.23722HepG2AGGF1
chr14471058644710644-intron-Distal4.681825.23961K562GTF2F1
chr14481994444819999-intron-Distal3.882038.35589K562RBFOX2
chr14479495744795007-intron-Distal3.696274.31711K562EXOSC5
chr14481140044811439-intron-Distal3.275974.46778K562EXOSC5
chr14479602444796069-intron-Distal4.350894.66899HepG2HNRNPM
chr14482024044820296-intron-Distal3.861386.80880K562RBFOX2
chr14474360544743671-intron-Distal4.504294.75311K562CSTF2T
chr14471285744712944-intron-Distal3.590665.50595K562TARDBP
chr14481118644811224-intron-Distal4.686976.08869K562EXOSC5
chr14473619944736235-intron-Distal4.447706.65725K562XRCC6
chr14481628044816357-intron-Distal5.023068.32953HepG2QKI
chr14478525044785280-intron-Distal,intron-Proximal4.623634.09264K562AQR
chr14474742344747527-intron-Distal4.5369313.31941K562HNRNPL
chr14471085844710929-intron-Distal4.533045.82840HepG2GTF2F1
chr14469370944693921-intron-Distal3.429124.84286HepG2PRPF4
chr14473620344736237-intron-Distal4.593463.50686HepG2XRCC6
chr14481968844819723-intron-Distal4.659815.47365K562RBFOX2
chr14475033244750432-intron-Distal,intron-Proximal3.865404.48652HepG2PTBP1
chr14481107644811121-intron-Distal3.995653.27946HepG2HNRNPM
chr14481947444819583-intron-Distal3.457115.24428K562RBFOX2
chr14481895944818989-intron-Distal3.834683.07980HepG2HNRNPM
chr14482052144820547-intron-Distal4.181374.98250K562AQR
chr14470701644707120-intron-Distal4.919067.78973K562TARDBP
chr14472530644725431-intron-Distal4.620683.94682K562EIF4G2
chr14473623544736246-intron-Distal5.360247.00239K562XRCC6
chr14475033444750384-intron-Distal3.884433.02181K562PRPF8
chr14474749444747530-intron-Distal5.323636.08124K562AGGF1
chr14479564544795681-intron-Distal4.214543.89085K562EXOSC5
chr14471057544710643-intron-Distal3.686753.19181K562HNRNPU
chr14481120144811267-intron-Distal3.348386.72696HepG2HNRNPM
chr14481174144811806-intron-Distal5.5999511.99536K562EXOSC5
chr14481275044812814-intron-Distal4.346053.01456K562EXOSC5
chr14481275844812831-intron-Distal3.458653.90822HepG2HNRNPM
chr14470742444707497-intron-Distal,intron-Proximal4.140863.34609K562TARDBP
chr14482047644820522-intron-Distal3.581214.61337K562EXOSC5
chr14470515144705207-intron-Distal3.762053.24593HepG2XPO5
chr14468732644687369-intron-Distal3.980333.25678HepG2SF3B4
chr14477303844773109-intron-Distal4.139653.46495K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ERI3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ERI3 is not available on ENCORE database.

  • 67 RBPs can affect the levels of ERI3.  








The Knockdown/knockout RNA-Seq assay for ERI3 is not available on ENCORE database.





67 RBPs can affect the gene expression of ERI3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ERI3ENSG00000117419.10411.49660576.89010-0.487402.950102.14000HepG2ASCC1
ERI3ENSG00000117419.10399.21940666.03200-0.7384010.319809.13290HepG2AUH
ERI3ENSG00000117419.10269.66720389.34520-0.529902.415801.57750HepG2BCLAF1
ERI3ENSG00000117419.10321.44230206.113600.641003.630502.95560HepG2BOP1
ERI3ENSG00000117419.10198.63120272.47640-0.456001.977401.31680HepG2CALR
ERI3ENSG00000117419.10415.68740667.86810-0.684105.387904.54170HepG2DDX3X
ERI3ENSG00000117419.10308.05110440.52110-0.516002.334401.61750HepG2DDX55
ERI3ENSG00000117419.10426.81180573.78810-0.426902.173101.61930HepG2DDX6
ERI3ENSG00000117419.10232.23290350.64640-0.594402.900201.76420HepG2AGO1
ERI3ENSG00000117419.10376.92480551.52140-0.549103.490002.82920HepG2EIF2S1
ERI3ENSG00000117419.10312.05850609.45970-0.965708.797707.66190HepG2EIF4A3
ERI3ENSG00000117419.10620.94740764.72640-0.300502.749702.15070HepG2ETF1
ERI3ENSG00000117419.10536.69940382.992900.486702.871202.02110HepG2EWSR1
ERI3ENSG00000117419.10101.02140189.55400-0.907902.357001.42590HepG2FTO
ERI3ENSG00000117419.10179.56130390.10340-1.119408.058906.25830HepG2FUS
ERI3ENSG00000117419.10293.97130570.47190-0.956508.835807.68230HepG2G3BP1
ERI3ENSG00000117419.10445.07290577.78940-0.376502.059001.45080HepG2HNRNPK
ERI3ENSG00000117419.10593.48340426.986600.474902.439401.66300HepG2LARP4
ERI3ENSG00000117419.10458.98560615.24430-0.422702.339701.73490HepG2MAGOH
ERI3ENSG00000117419.10343.04130633.22850-0.884307.922006.87580HepG2NCBP2
ERI3ENSG00000117419.10255.65860404.46040-0.661802.463601.43700HepG2NONO
ERI3ENSG00000117419.10162.18620255.71500-0.656902.422801.60300HepG2PABPC1
ERI3ENSG00000117419.10296.21990563.86460-0.928708.520207.26970HepG2PABPC4
ERI3ENSG00000117419.10189.70260339.88360-0.841304.992603.94150HepG2PRPF8
ERI3ENSG00000117419.10444.03460561.53900-0.338702.280701.77430HepG2PTBP1
ERI3ENSG00000117419.10318.84380562.79850-0.819809.083507.90250HepG2PUM2
ERI3ENSG00000117419.10460.30680608.15860-0.401902.906102.26870HepG2QKI
ERI3ENSG00000117419.10238.71310356.27830-0.577702.140101.51410HepG2RAVER1
ERI3ENSG00000117419.10293.00150415.72380-0.504703.437602.49070HepG2RBM15
ERI3ENSG00000117419.10433.82360639.16300-0.559105.398304.73480HepG2RBM22
ERI3ENSG00000117419.10387.94620551.94380-0.508703.775902.99690HepG2RBM25
ERI3ENSG00000117419.10471.78240624.93820-0.405603.235502.65990HepG2NELFE
ERI3ENSG00000117419.10173.87340336.22080-0.951405.722104.63130HepG2RRP9
ERI3ENSG00000117419.10385.49540584.63290-0.600805.979605.16710HepG2SF3B4
ERI3ENSG00000117419.10498.49950610.23080-0.291801.944301.52820HepG2SRSF1
ERI3ENSG00000117419.10429.57880523.83210-0.286201.876601.34780HepG2SRSF5
ERI3ENSG00000117419.10299.77860496.45590-0.727808.361907.49490HepG2SRSF9
ERI3ENSG00000117419.10174.21890438.54860-1.3318011.2312010.02080HepG2SUPV3L1
ERI3ENSG00000117419.10439.23450548.50120-0.320502.075401.57670HepG2TAF15
ERI3ENSG00000117419.10358.39630503.99580-0.491903.707102.74640HepG2TIA1
ERI3ENSG00000117419.10257.71910356.88440-0.469702.494101.89600HepG2U2AF1
ERI3ENSG00000117419.10312.35380548.60050-0.812605.787004.54700HepG2UBE2L3
ERI3ENSG00000117419.10418.69440309.069300.437902.912502.30200HepG2UTP3
ERI3ENSG00000117419.10266.89560347.10720-0.379102.191901.58370HepG2ZC3H8
ERI3ENSG00000117419.101588.31250996.992700.6717014.7453013.54250K562AGGF1
ERI3ENSG00000117419.10930.486601562.24500-0.747609.774408.77580K562AQR
ERI3ENSG00000117419.101308.226201088.519200.265102.503401.63740K562ATP5C1
ERI3ENSG00000117419.10455.41750733.07490-0.686804.132101.49150K562DDX55
ERI3ENSG00000117419.101343.397001116.298900.267102.610701.76410K562DKC1
ERI3ENSG00000117419.10461.36700641.47890-0.475503.389201.89330K562DNAJC21
ERI3ENSG00000117419.101034.117601233.47220-0.254302.315701.64880K562EIF2S2
ERI3ENSG00000117419.10982.18510693.933000.501103.248602.32650K562FIP1L1
ERI3ENSG00000117419.10294.42260411.84620-0.484202.699501.85620K562FMR1
ERI3ENSG00000117419.10247.70410349.07320-0.494902.341401.50530K562FTO
ERI3ENSG00000117419.10320.15620516.28100-0.689407.037704.78320K562FUS
ERI3ENSG00000117419.10311.21690583.12830-0.905907.163405.91220K562G3BP2
ERI3ENSG00000117419.10489.08360867.18970-0.826308.990907.96610K562HNRNPC
ERI3ENSG00000117419.10209.24370329.98750-0.657203.105202.10940K562KRR1
ERI3ENSG00000117419.101625.343601233.335600.398104.401503.20490K562MBNL1
ERI3ENSG00000117419.10877.533901041.39240-0.247002.546201.82670K562NSUN2
ERI3ENSG00000117419.101111.78410616.170400.851404.226102.93760K562PABPN1
ERI3ENSG00000117419.10783.294901004.05230-0.358202.144701.41110K562PCBP3
ERI3ENSG00000117419.101115.68760787.884000.501802.956602.10460K562PPIG
ERI3ENSG00000117419.101532.457301949.10750-0.347002.929802.09040K562PUF60
ERI3ENSG00000117419.101736.451302031.29790-0.226302.355601.46790K562PUM2
ERI3ENSG00000117419.101310.036301028.790500.348602.793902.24860K562PUS1
ERI3ENSG00000117419.101206.876701002.441400.267702.334301.78180K562RBM15
ERI3ENSG00000117419.10936.80770563.427900.733402.470201.36170K562SF1
ERI3ENSG00000117419.10832.549401027.55930-0.303602.862402.03580K562SF3A3
ERI3ENSG00000117419.10222.77460367.53340-0.722304.108202.90700K562SF3B1
ERI3ENSG00000117419.10473.85000606.42740-0.355902.511701.69870K562SF3B4
ERI3ENSG00000117419.10473.42920733.58350-0.631804.875803.49480K562SUPV3L1
ERI3ENSG00000117419.10394.16750583.83150-0.566705.132304.04330K562U2AF2
ERI3ENSG00000117419.10577.06180776.44460-0.428202.906901.85770K562UCHL5
ERI3ENSG00000117419.101431.270401759.91180-0.298202.394701.60080K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ERI3 is not available on ENCORE database.





14 RBPs can affect the splicing of ERI3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEERI3ENSG00000117419.10chr1-448047164480499444785299447854164481852144818597-0.138000.000030.00114excludedK562SRSF1
SEERI3ENSG00000117419.10chr1-448185214481859744804716448049944482093144820932-0.169000.000550.01275excludedK562SF3B4
SEERI3ENSG00000117419.10chr1-448047164480499444785299447854164482093144820932-0.249000.000000.00000excludedK562PRPF8
SEERI3ENSG00000117419.10chr1-4471361044713710446867414468731244750506447505790.083000.000130.06464includedK562TIA1
SEERI3ENSG00000117419.10chr1-4471361044713710446867414468731244750506447505790.080000.000120.03451includedK562PCBP1
SEERI3ENSG00000117419.10chr1-448047164480499444785299447854164482093144820932-0.107000.003640.03585excludedK562AQR
SEERI3ENSG00000117419.10chr1-447136104471371044686741446873124475050644750579-0.076000.000280.06000excludedK562HNRNPA1
SEERI3ENSG00000117419.10chr1-448047164480499444785299447854164482093144820932-0.123000.000370.03455excludedK562SUPV3L1
SEERI3ENSG00000117419.10chr1-447136104471371044686741446873124475050644750579-0.088000.000050.00137excludedK562PUS1
SEERI3ENSG00000117419.10chr1-448047164480499444785299447854164482093144820932-0.149000.000020.00264excludedK562EFTUD2
SEERI3ENSG00000117419.10chr1-447136104471371044686741446873124475050644750579-0.090000.000620.02975excludedHepG2MATR3
SEERI3ENSG00000117419.10chr1-447136104471371044686741446873124475050644750579-0.150000.000010.00037excludedK562U2AF1
SEERI3ENSG00000117419.10chr1-448047164480498844785299447854164481852144818597-0.219000.005300.09199excludedHepG2SRSF1
SEERI3ENSG00000117419.10chr1-447136104471371044686741446873124475050644750579-0.214000.000000.00001excludedK562U2AF2
SEERI3ENSG00000117419.10chr1-448047164480499444785299447854164481852144818597-0.183000.000000.00012excludedK562TARDBP
MXEERI3ENSG00000117419.10chr1-4475050644750579447739814477407344686741446873124477884044778900-0.162000.000010.000252includedK562PUS1
MXEERI3ENSG00000117419.10chr1-44778840447789004478529944785416447739814477407344818521448185990.072000.000180.006811includedK562TARDBP
MXEERI3ENSG00000117419.10chr1-4477398144774073447852994478541644750506447505794480471644804994-0.145000.003380.057232includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ERI3 is not avaliable on ENCORE database.