DNAJC9

General Information

Gene Name : DNAJC9
Gene ID : ENSG00000213551.4
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DNAJC9)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DNAJC9	ENSG00000213551.4	27.54	28.57	28.05	ENCSR000AEF
HepG2	DNAJC9	ENSG00000213551.4	34.91	40.42	37.66	ENCSR985KAT
K562	DNAJC9	ENSG00000213551.4	72.39	68.93	70.66	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DNAJC9 is not avaliable on ENCORE database.

Proteins bound to RNA

DNAJC9 RNA is bound by 28 proteins.

CanvasJS.com

eCLIP assay for DNAJC9 is not avaliable on ENCORE database.

28 proteins are bound to DNAJC9 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	75008714	75008786	-	3'-UTR,intron-Distal,intron-Proximal	8.48334	81.86637	HepG2	UPF1
chr10	75008707	75008797	-	3'-UTR,intron-Distal,intron-Proximal	5.60608	70.49889	K562	UPF1
chr10	75008714	75008796	-	3'-UTR,intron-Distal,intron-Proximal	4.03000	65.92482	K562	AKAP1
chr10	75006908	75007007	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	5.05321	33.14027	K562	DDX3X
chr10	75006719	75006774	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.94977	31.20620	HepG2	PRPF8
chr10	75003078	75003149	-	3'-UTR,intron-Distal	3.63724	30.64051	K562	PUM2
chr10	75002598	75002701	-	3'-UTR,intron-Distal	3.14466	25.56234	K562	PUM2
chr10	75008715	75008782	-	3'-UTR,intron-Distal,intron-Proximal	5.12541	22.51435	HepG2	AKAP1
chr10	75006850	75006908	-	3'-UTR,CDS,intron-Distal	4.65967	16.75565	K562	DDX3X
chr10	75006774	75006793	-	3'-UTR,CDS,intron-Distal	3.94126	16.74703	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 53 entries

eCLIP assay for DNAJC9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DNAJC9 is not available on ENCORE database.
104 RBPs can affect the levels of DNAJC9.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DNAJC9 is not available on ENCORE database.

104 RBPs can affect the gene expression of DNAJC9 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DNAJC9	ENSG00000213551.4	245.32380	999.14200	-2.02600	81.49950	79.61490	HepG2	ZNF622
DNAJC9	ENSG00000213551.4	492.72970	1338.43780	-1.44170	45.88260	43.92200	HepG2	CELF1
DNAJC9	ENSG00000213551.4	1681.40380	3117.21790	-0.89060	21.16750	19.22840	K562	SRSF1
DNAJC9	ENSG00000213551.4	3796.62200	2386.45870	0.66970	18.83130	17.36330	K562	FXR1
DNAJC9	ENSG00000213551.4	382.63580	859.49010	-1.16750	17.69800	16.37760	HepG2	BOP1
DNAJC9	ENSG00000213551.4	901.93140	1446.08690	-0.68110	17.16000	15.94390	HepG2	PUM1
DNAJC9	ENSG00000213551.4	1443.90940	2550.62140	-0.82090	19.20910	15.69590	K562	FUS
DNAJC9	ENSG00000213551.4	420.33510	980.04300	-1.22130	15.01520	13.65850	HepG2	SUPV3L1
DNAJC9	ENSG00000213551.4	577.89300	1135.16630	-0.97400	14.88100	13.53410	HepG2	RPLP0
DNAJC9	ENSG00000213551.4	399.23410	853.58000	-1.09630	14.11530	12.84420	HepG2	HNRNPLL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 123 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DNAJC9 is not available on ENCORE database.

13 RBPs can affect the splicing of DNAJC9 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	DNAJC9	ENSG00000213551.4	chr10	-	75006196	75006344	75005679	75005934	75006445	75006586	0.08800	0.00000	0.00015	included	K562	SRSF1
SE	DNAJC9	ENSG00000213551.4	chr10	-	75006196	75006344	75005679	75005934	75006445	75006586	0.10400	0.00000	0.00001	included	HepG2	U2AF2
SE	DNAJC9	ENSG00000213551.4	chr10	-	75006196	75006344	75005679	75005934	75006445	75006586	-0.06100	0.00000	0.00000	excluded	K562	PUS1
SE	DNAJC9	ENSG00000213551.4	chr10	-	75006196	75006344	75005679	75005934	75006445	75006586	-0.13500	0.00000	0.00045	excluded	HepG2	PTBP1
SE	DNAJC9	ENSG00000213551.4	chr10	-	75006196	75006344	75005679	75005934	75006445	75006586	-0.05900	0.00000	0.00000	excluded	K562	AGGF1
SE	DNAJC9	ENSG00000213551.4	chr10	-	75006196	75006344	75005679	75005934	75006445	75006586	-0.06000	0.00000	0.00000	excluded	K562	ZC3H8
SE	DNAJC9	ENSG00000213551.4	chr10	-	75006196	75006344	75005679	75005934	75006445	75006586	0.12700	0.00000	0.00000	included	K562	HNRNPK
SE	DNAJC9	ENSG00000213551.4	chr10	-	75006196	75006344	75005679	75005934	75006445	75006586	0.05800	0.00002	0.00077	included	K562	SF3B4
SE	DNAJC9	ENSG00000213551.4	chr10	-	75006196	75006344	75005679	75005934	75006445	75006586	-0.05100	0.00002	0.03859	excluded	K562	DDX6
SE	DNAJC9	ENSG00000213551.4	chr10	-	75006196	75006344	75005679	75005934	75006445	75006586	0.05900	0.00012	0.02576	included	K562	RBM22

Showing 1 to 10 of 15 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DNAJC9

General Information

Functions

Localization

Domains (AlphaFold: DNAJC9)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DNAJC9 is not avaliable on ENCORE database.

28 proteins are bound to DNAJC9 RNA:

eCLIP assay for DNAJC9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DNAJC9 is not available on ENCORE database.

104 RBPs can affect the gene expression of DNAJC9 :

The Knockdown/knockout RNA-Seq assay for DNAJC9 is not available on ENCORE database.

13 RBPs can affect the splicing of DNAJC9 :

The Knockdown/knockout RNA-Seq assay for DNAJC9 is not avaliable on ENCORE database.