CORO2A

General Information

Gene Name       : CORO2A
Gene ID             : ENSG00000106789.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CORO2A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CORO2AENSG00000106789.123.493.393.44ENCSR000AEF
HepG2CORO2AENSG00000106789.1216.6316.4016.52ENCSR985KAT
K562CORO2AENSG00000106789.1217.0017.8717.44ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CORO2A is not avaliable on ENCORE database.



Proteins bound to RNA
  • CORO2A RNA is bound by 7 proteins.  







eCLIP assay for CORO2A is not avaliable on ENCORE database.





7 proteins are bound to CORO2A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9100885498100885555-3'-UTR,intron-Distal4.464344.31023HepG2LIN28B
chr9100884816100884876-3'-UTR,intron-Distal4.859775.84761K562FAM120A
chr9100885467100885564-3'-UTR,intron-Distal4.371338.58502K562LIN28B
chr9100895365100895453-CDS,intron-Distal3.205995.56979K562YBX3
chr9100919901100919923-CDS,intron-Distal4.000333.65750K562YBX3
chr9100890475100890537-CDS,intron-Distal3.349044.11795K562YBX3
chr9100899963100899971-CDS,intron-Distal,intron-Proximal5.5983215.01781K562YBX3
chr9100919745100919758-CDS,intron-Distal4.5383013.13020K562YBX3
chr9100899930100899963-CDS,intron-Distal5.6781516.12882K562YBX3
chr9100893172100893261-CDS,intron-Distal,intron-Proximal3.535985.13777HepG2PRPF8
chr9100919828100919901-CDS,intron-Distal4.199264.72754K562YBX3
chr9100919740100919745-CDS,intron-Distal,intron-Proximal4.4324811.83078K562YBX3
chr9100934416100934506-intron-Distal3.971093.31153K562GTF2F1
chr9100912747100912941-intron-Distal4.622485.58765HepG2QKI
chr9100915896100916002-intron-Distal4.794645.17678K562EIF4G2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CORO2A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CORO2A is not available on ENCORE database.

  • 106 RBPs can affect the levels of CORO2A.  








The Knockdown/knockout RNA-Seq assay for CORO2A is not available on ENCORE database.





106 RBPs can affect the gene expression of CORO2A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CORO2AENSG00000106789.8510.05990780.10290-0.613003.992401.95750HepG2AARS
CORO2AENSG00000106789.81146.02000682.641100.7473016.1237014.91410HepG2ACO1
CORO2AENSG00000106789.8467.56210685.83440-0.552706.375905.25570HepG2AKAP8L
CORO2AENSG00000106789.8321.57890795.92100-1.3075016.7695014.29220HepG2BCCIP
CORO2AENSG00000106789.8282.71250593.32620-1.0695012.4650011.31620HepG2BOP1
CORO2AENSG00000106789.8909.98120614.525200.566305.778004.04670HepG2BUD13
CORO2AENSG00000106789.8492.13110623.41040-0.341102.284101.57800HepG2CALR
CORO2AENSG00000106789.81512.36880874.111800.7908010.059708.66620HepG2CIRBP
CORO2AENSG00000106789.8230.04770500.09110-1.120307.814206.53950HepG2CNOT7
CORO2AENSG00000106789.8242.38710544.69400-1.1681013.0805011.70760HepG2CPSF6
CORO2AENSG00000106789.81408.122901067.703700.399205.168004.33900HepG2CELF1
CORO2AENSG00000106789.8915.036201148.04970-0.327304.227603.34180HepG2DAZAP1
CORO2AENSG00000106789.81367.78810727.693200.9103014.7073013.28740HepG2DDX21
CORO2AENSG00000106789.8397.91020592.71020-0.574904.213602.51180HepG2DDX28
CORO2AENSG00000106789.8545.611901065.17340-0.9651011.7387010.53180HepG2DDX3X
CORO2AENSG00000106789.8865.62180653.098200.406304.158203.36170HepG2DKC1
CORO2AENSG00000106789.8593.43360736.65710-0.311902.979602.30700HepG2DNAJC2
CORO2AENSG00000106789.8697.13710879.61780-0.335401.887901.38740HepG2EIF2S1
CORO2AENSG00000106789.8676.61810946.45270-0.484202.623501.95200HepG2EIF4B
CORO2AENSG00000106789.8910.881001132.61620-0.314303.122802.24340HepG2EIF4G1
CORO2AENSG00000106789.8862.472201084.97480-0.331102.251601.51170HepG2EIF4G2
CORO2AENSG00000106789.8664.265501291.67480-0.9594023.8578022.39130HepG2ETF1
CORO2AENSG00000106789.8516.98840693.56890-0.423903.093301.89000HepG2FASTKD2
CORO2AENSG00000106789.8280.47250545.65210-0.960103.903402.69540HepG2FTO
CORO2AENSG00000106789.8452.32060909.82430-1.0082011.7611010.43620HepG2G3BP1
CORO2AENSG00000106789.81099.68010617.420900.832708.770507.67310HepG2GPKOW
CORO2AENSG00000106789.8315.10350462.89440-0.554902.656401.56790HepG2GRSF1
CORO2AENSG00000106789.8922.55400651.716600.501306.766905.32390HepG2HDGF
CORO2AENSG00000106789.8855.398101055.08760-0.302702.965202.00290HepG2HNRNPA2B1
CORO2AENSG00000106789.8430.42370834.59500-0.9553012.1931010.82810HepG2HNRNPC
CORO2AENSG00000106789.8243.34190921.26100-1.9206038.9757036.65950HepG2HNRNPK
CORO2AENSG00000106789.8866.904001045.78730-0.270602.846402.16490HepG2HNRNPL
CORO2AENSG00000106789.8433.06310571.43530-0.400002.537601.62550HepG2HNRNPM
CORO2AENSG00000106789.8427.97150867.89160-1.020004.143402.94250HepG2IGF2BP3
CORO2AENSG00000106789.8638.22640846.87280-0.408105.202504.22410HepG2ILF2
CORO2AENSG00000106789.8346.02480745.61780-1.1076015.2952012.67960HepG2LIN28B
CORO2AENSG00000106789.81157.35820670.324000.7878011.097809.58680HepG2MSI2
CORO2AENSG00000106789.8485.588401009.85730-1.0563013.3022011.97680HepG2NCBP2
CORO2AENSG00000106789.8581.88830820.63340-0.496005.836904.67450HepG2PARN
CORO2AENSG00000106789.8556.71910796.39770-0.516502.755801.71740HepG2PCBP2
CORO2AENSG00000106789.81576.084901086.703900.536306.431105.57250HepG2PUF60
CORO2AENSG00000106789.8655.740401153.58220-0.8149020.1768018.87320HepG2PUM1
CORO2AENSG00000106789.8892.438301152.74080-0.369203.447602.70210HepG2PUM2
CORO2AENSG00000106789.81303.86570695.311700.9070024.3773022.88530HepG2PUS1
CORO2AENSG00000106789.8484.436601079.60090-1.1561025.7608024.50320HepG2RBM22
CORO2AENSG00000106789.8526.65920856.40650-0.701407.206805.59500HepG2RBM27
CORO2AENSG00000106789.8627.69240789.81360-0.331502.060201.36350HepG2RPS2
CORO2AENSG00000106789.8633.89740806.25000-0.347002.272401.30350HepG2RPS5
CORO2AENSG00000106789.8397.60560596.97000-0.586304.002403.07840HepG2RRP9
CORO2AENSG00000106789.8592.10690738.32440-0.318402.839402.18870HepG2SAFB2
CORO2AENSG00000106789.8364.33880534.05210-0.551703.701202.61040HepG2SERBP1
CORO2AENSG00000106789.8715.57230977.80060-0.450402.976502.36710HepG2SF3B4
CORO2AENSG00000106789.8413.28350784.20880-0.924108.046906.37220HepG2SMNDC1
CORO2AENSG00000106789.8460.54750648.90980-0.494702.254701.55280HepG2SNRNP70
CORO2AENSG00000106789.8614.990001219.36920-0.9875025.2997024.18260HepG2SRFBP1
CORO2AENSG00000106789.8402.96980627.56930-0.639103.901102.68940HepG2SRSF3
CORO2AENSG00000106789.8812.628701072.95940-0.400904.823404.03480HepG2SRSF5
CORO2AENSG00000106789.8589.95720814.20730-0.464805.204404.29740HepG2SRSF7
CORO2AENSG00000106789.8629.74270830.22170-0.398702.633402.09160HepG2SRSF9
CORO2AENSG00000106789.81304.686201058.700600.301303.444502.88660HepG2SSB
CORO2AENSG00000106789.8406.52030588.29830-0.533203.326501.92660HepG2SSRP1
CORO2AENSG00000106789.8332.77030553.21610-0.733304.125002.64310HepG2STAU1
CORO2AENSG00000106789.81027.078201220.25250-0.248602.622902.01390HepG2SUCLG1
CORO2AENSG00000106789.8664.40230917.14520-0.465103.421002.80800HepG2TAF15
CORO2AENSG00000106789.8369.37150522.10090-0.499302.703701.71770HepG2TFIP11
CORO2AENSG00000106789.8778.762901061.66040-0.447104.212303.10660HepG2TUFM
CORO2AENSG00000106789.8246.82270460.13930-0.898608.126006.82820HepG2UCHL5
CORO2AENSG00000106789.8939.82760786.654300.256602.291401.64600HepG2UPF1
CORO2AENSG00000106789.8252.21980449.57520-0.833905.537703.98410HepG2XPO5
CORO2AENSG00000106789.8542.12390845.17610-0.640604.142602.85410HepG2XRCC6
CORO2AENSG00000106789.8485.79040696.06550-0.518906.147105.20830HepG2ZC3H8
CORO2AENSG00000106789.8997.64000865.167600.205401.845901.37450HepG2ZNF622
CORO2AENSG00000106789.8512.26600767.94480-0.584103.698102.18410HepG2ZRANB2
CORO2AENSG00000106789.81118.736201619.81970-0.534005.634403.88610K562ABCF1
CORO2AENSG00000106789.8691.002501003.03670-0.537607.546906.67510K562AGGF1
CORO2AENSG00000106789.8895.883001102.10780-0.298902.174301.31520K562AKAP8
CORO2AENSG00000106789.8706.826601783.16540-1.3350028.8547027.16420K562AQR
CORO2AENSG00000106789.8726.988401107.09970-0.606808.862906.42230K562BCCIP
CORO2AENSG00000106789.8877.258201069.78070-0.286202.656401.71740K562BCLAF1
CORO2AENSG00000106789.8335.75420751.09180-1.1616015.0804013.00250K562BOP1
CORO2AENSG00000106789.8848.864401128.29840-0.410502.802001.37440K562BUD13
CORO2AENSG00000106789.8531.74680701.69740-0.400102.676601.64510K562CCAR1
CORO2AENSG00000106789.8582.11200798.60100-0.456203.904402.97330K562CPSF6
CORO2AENSG00000106789.82036.245502638.68020-0.373904.071002.87900K562CELF1
CORO2AENSG00000106789.8825.528001043.53880-0.338102.254601.43130K562EFTUD2
CORO2AENSG00000106789.81069.003001486.42050-0.475606.073805.07030K562EIF2S2
CORO2AENSG00000106789.8795.002101117.32320-0.491003.291702.15620K562EIF3D
CORO2AENSG00000106789.8886.218401238.11330-0.482402.991401.30390K562ESF1
CORO2AENSG00000106789.8554.82230799.49760-0.527103.927002.55610K562FKBP4
CORO2AENSG00000106789.8577.44580812.60620-0.492903.795302.78940K562FMR1
CORO2AENSG00000106789.8400.91940688.77810-0.780707.136405.59850K562FTO
CORO2AENSG00000106789.8386.38150604.50410-0.645703.378902.58320K562G3BP2
CORO2AENSG00000106789.8506.44410762.44740-0.590205.354904.25660K562GPKOW
CORO2AENSG00000106789.81229.451801980.96660-0.688208.390907.06230K562GRSF1
CORO2AENSG00000106789.8676.58940920.23080-0.443703.849503.15970K562HNRNPC
CORO2AENSG00000106789.8318.815601027.14970-1.6879029.6649025.99130K562HNRNPK
CORO2AENSG00000106789.8687.70180957.76120-0.477903.333102.30380K562HNRNPM
CORO2AENSG00000106789.81114.609301578.67210-0.502205.096004.02930K562HSPD1
CORO2AENSG00000106789.8498.87490708.57280-0.506203.822202.07780K562KHDRBS1
CORO2AENSG00000106789.81411.516801078.723300.387803.777402.68500K562MATR3
CORO2AENSG00000106789.8548.08500744.24220-0.441403.457202.47350K562METAP2
CORO2AENSG00000106789.8745.289501230.70330-0.7236012.7898011.20380K562MTPAP
CORO2AENSG00000106789.81088.056701367.39340-0.329704.866903.91580K562NSUN2
CORO2AENSG00000106789.81023.879701321.86060-0.368502.827801.99710K562PPIG
CORO2AENSG00000106789.8608.034701015.48320-0.739907.924506.64750K562PRPF8
CORO2AENSG00000106789.81407.370301050.305900.422103.996403.21300K562PTBP1
CORO2AENSG00000106789.82056.845602490.58870-0.276102.268701.31210K562PUM1
CORO2AENSG00000106789.8714.176901035.18730-0.535504.754104.06690K562PUS1
CORO2AENSG00000106789.8949.89280753.040500.334902.506201.56630K562RCC2
CORO2AENSG00000106789.8748.37950427.497500.807802.763701.76150K562RPS3
CORO2AENSG00000106789.8982.915401349.31070-0.457106.211805.02810K562SF3A3
CORO2AENSG00000106789.8520.97270725.18760-0.477102.963501.95560K562SF3B1
CORO2AENSG00000106789.81399.967801029.714600.443004.729803.80970K562SRSF1
CORO2AENSG00000106789.8609.40620813.20020-0.416204.040902.44820K562SSB
CORO2AENSG00000106789.81017.509701397.31690-0.457603.706802.22200K562STAU1
CORO2AENSG00000106789.8562.71750934.39430-0.731603.044001.52580K562SUPT6H
CORO2AENSG00000106789.81404.948601041.999100.431103.680002.85980K562TARDBP
CORO2AENSG00000106789.8344.38360586.38930-0.767803.562802.28680K562U2AF1
CORO2AENSG00000106789.8452.02850605.47240-0.421603.171902.31280K562U2AF2
CORO2AENSG00000106789.81045.386501449.87840-0.471907.838906.70300K562UPF1
CORO2AENSG00000106789.8700.440801357.88420-0.9550011.255309.04170K562UTP3
CORO2AENSG00000106789.8825.745601240.61150-0.587307.323805.85900K562WDR3
CORO2AENSG00000106789.81251.504202008.92170-0.6828010.373608.57950K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CORO2A is not available on ENCORE database.





2 RBPs can affect the splicing of CORO2A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECORO2AENSG00000106789.8chr9-100890451100890542100888830100889105100890888100891001-0.068000.002310.02470excludedK562AQR
A3SSCORO2AENSG00000106789.8chr9-1008904511008906371008904511008905421008908881008910010.103000.000520.02260longerK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CORO2A is not avaliable on ENCORE database.