ARHGEF12

General Information

Gene Name : ARHGEF12
Gene ID : ENSG00000196914.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ARHGEF12)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ARHGEF12	ENSG00000196914.8	22.07	20.60	21.34	ENCSR000AEF
HepG2	ARHGEF12	ENSG00000196914.8	17.75	25.38	21.56	ENCSR985KAT
K562	ARHGEF12	ENSG00000196914.8	21.59	21.95	21.77	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ARHGEF12 is not avaliable on ENCORE database.

Proteins bound to RNA

ARHGEF12 RNA is bound by 43 proteins.

CanvasJS.com

eCLIP assay for ARHGEF12 is not avaliable on ENCORE database.

43 proteins are bound to ARHGEF12 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	120356795	120356890	+	3'-UTR	6.48183	40.02525	K562	UPF1
chr11	120337902	120338027	+	CDS,intron-Proximal	3.67722	19.83693	HepG2	BCLAF1
chr11	120356910	120356986	+	3'-UTR	4.66798	19.64189	K562	UPF1
chr11	120281770	120281852	+	intron-Distal	5.11637	19.47138	HepG2	QKI
chr11	120356804	120356898	+	3'-UTR	4.94396	18.48225	K562	FAM120A
chr11	120319814	120319927	+	CDS,intron-Proximal	3.95419	17.79089	K562	ZNF622
chr11	120290866	120290969	+	intron-Distal	4.88063	17.32936	HepG2	PTBP1
chr11	120210402	120210455	+	intron-Distal	5.96658	16.65417	HepG2	HNRNPM
chr11	120295123	120295170	+	CDS,intron-Proximal	4.58471	16.15323	K562	AQR
chr11	120290869	120290946	+	intron-Distal	5.32621	16.06251	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 259 entries

eCLIP assay for ARHGEF12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ARHGEF12 is not available on ENCORE database.
78 RBPs can affect the levels of ARHGEF12.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ARHGEF12 is not available on ENCORE database.

78 RBPs can affect the gene expression of ARHGEF12 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ARHGEF12	ENSG00000196914.4	2498.91500	3713.85340	-0.57160	15.81760	14.21210	HepG2	PRPF4
ARHGEF12	ENSG00000196914.4	1524.88330	2955.68160	-0.95480	15.25150	13.57600	HepG2	XRN2
ARHGEF12	ENSG00000196914.4	4138.61010	5927.11070	-0.51820	13.13430	10.78270	K562	CPEB4
ARHGEF12	ENSG00000196914.4	6257.34360	4714.67530	0.40830	11.45620	10.63580	HepG2	SRSF1
ARHGEF12	ENSG00000196914.4	5118.85000	3835.72110	0.41620	11.17880	10.20040	HepG2	SRSF9
ARHGEF12	ENSG00000196914.4	2937.31440	4888.98640	-0.73500	12.27170	10.17250	K562	PPIG
ARHGEF12	ENSG00000196914.4	2971.20940	5427.81520	-0.86930	10.57060	8.69760	HepG2	CCAR1
ARHGEF12	ENSG00000196914.4	3861.08440	2302.15270	0.74590	10.05290	8.69200	HepG2	RRP9
ARHGEF12	ENSG00000196914.4	3415.98330	2266.87060	0.59150	9.45130	8.04430	HepG2	FUBP3
ARHGEF12	ENSG00000196914.4	2032.80260	3715.19190	-0.87000	9.53410	7.69660	HepG2	SMNDC1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 85 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ARHGEF12 is not available on ENCORE database.

15 RBPs can affect the splicing of ARHGEF12 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ARHGEF12	ENSG00000196914.4	chr11	+	120328429	120328465	120327826	120327959	120328788	120328943	-0.09200	0.00000	0.00007	excluded	K562	SF3B4
SE	ARHGEF12	ENSG00000196914.4	chr11	+	120312812	120312911	120312415	120312526	120316130	120316173	-0.18300	0.00000	0.00006	excluded	HepG2	U2AF1
SE	ARHGEF12	ENSG00000196914.4	chr11	+	120312812	120312911	120312415	120312526	120316130	120316173	-0.18600	0.00000	0.00000	excluded	HepG2	U2AF2
SE	ARHGEF12	ENSG00000196914.4	chr11	+	120308016	120308091	120302479	120302620	120310837	120310930	-0.06600	0.00000	0.00006	excluded	K562	PUS1
SE	ARHGEF12	ENSG00000196914.4	chr11	+	120280102	120280159	120278446	120278532	120291461	120291560	0.40700	0.00000	0.00003	included	HepG2	MATR3
A3SS	ARHGEF12	ENSG00000196914.4	chr11	+	120348864	120349098	120348942	120349098	120348155	120348235	-0.45700	0.00000	0.00000	shorter	K562	U2AF2
A3SS	ARHGEF12	ENSG00000196914.4	chr11	+	120348864	120349098	120348942	120349098	120348155	120348235	-0.46200	0.00000	0.00000	shorter	HepG2	U2AF2
SE	ARHGEF12	ENSG00000196914.4	chr11	+	120300420	120300540	120300148	120300226	120302479	120302620	-0.13200	0.00001	0.00683	excluded	K562	APOBEC3C
SE	ARHGEF12	ENSG00000196914.4	chr11	+	120208465	120208578	120207786	120207984	120276826	120276850	0.05300	0.00002	0.00043	included	HepG2	U2AF2
SE	ARHGEF12	ENSG00000196914.4	chr11	+	120300420	120300540	120300148	120300226	120302479	120302620	-0.15100	0.00004	0.00519	excluded	HepG2	RBM22

Showing 1 to 10 of 23 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ARHGEF12

General Information

Functions

Localization

Domains (AlphaFold: ARHGEF12)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ARHGEF12 is not avaliable on ENCORE database.

43 proteins are bound to ARHGEF12 RNA:

eCLIP assay for ARHGEF12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ARHGEF12 is not available on ENCORE database.

78 RBPs can affect the gene expression of ARHGEF12 :

The Knockdown/knockout RNA-Seq assay for ARHGEF12 is not available on ENCORE database.

15 RBPs can affect the splicing of ARHGEF12 :

The Knockdown/knockout RNA-Seq assay for ARHGEF12 is not avaliable on ENCORE database.