TBXA2R

General Information

Gene Name       : TBXA2R
Gene ID             : ENSG00000006638.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TBXA2R)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TBXA2RENSG00000006638.110.000.020.01ENCSR000AEF
HepG2TBXA2RENSG00000006638.110.000.020.01ENCSR985KAT
K562TBXA2RENSG00000006638.114.812.903.85ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TBXA2R is not avaliable on ENCORE database.



Proteins bound to RNA
  • TBXA2R RNA is bound by 2 proteins.  







eCLIP assay for TBXA2R is not avaliable on ENCORE database.





2 proteins are bound to TBXA2R RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1935955873595657-3'-UTR,CDS,intron-Distal,intron-Proximal4.117853.81597K562RBM15
chr1936052953605382-intron-Distal4.054683.91772K562TARDBP
chr1936060263606153-intron-Distal4.691196.49093K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TBXA2R is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TBXA2R is not available on ENCORE database.

  • 44 RBPs can affect the levels of TBXA2R.  








The Knockdown/knockout RNA-Seq assay for TBXA2R is not available on ENCORE database.





44 RBPs can affect the gene expression of TBXA2R :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TBXA2RENSG00000006638.718.256200.994404.198303.769003.05730HepG2DDX6
TBXA2RENSG00000006638.711.714300.956003.615002.267301.72610HepG2EIF2S1
TBXA2RENSG00000006638.725.803801.764303.870304.897403.22620HepG2KRR1
TBXA2RENSG00000006638.7130.3369071.823700.859603.113201.85250K562AARS
TBXA2RENSG00000006638.760.84810211.90080-1.800108.527607.58910K562AQR
TBXA2RENSG00000006638.771.51330125.61970-0.812802.823601.30140K562CEBPZ
TBXA2RENSG00000006638.781.07220168.57680-1.056104.149702.80690K562CNOT7
TBXA2RENSG00000006638.757.07460104.38690-0.871002.782501.99770K562CPSF6
TBXA2RENSG00000006638.7118.42690237.76380-1.005505.518704.13700K562CELF1
TBXA2RENSG00000006638.7129.6069079.811100.699402.397801.43100K562DDX3X
TBXA2RENSG00000006638.783.34440193.03660-1.211708.211107.16720K562DDX47
TBXA2RENSG00000006638.7142.6708080.910000.818203.464601.95980K562DDX6
TBXA2RENSG00000006638.7428.23070123.676401.7917021.8969020.16850K562EIF2S2
TBXA2RENSG00000006638.740.71910112.02640-1.460104.510203.19460K562EIF3A
TBXA2RENSG00000006638.7105.75400193.27930-0.870004.772903.55450K562EIF4G2
TBXA2RENSG00000006638.746.0178089.99890-0.967702.695801.79330K562FTO
TBXA2RENSG00000006638.797.20580194.13110-0.997906.016104.37170K562GLRX3
TBXA2RENSG00000006638.774.64850170.02870-1.187602.811001.73070K562HNRNPA1
TBXA2RENSG00000006638.7206.02100128.039200.686103.095602.25640K562HSPD1
TBXA2RENSG00000006638.768.96080153.94700-1.158604.099102.35190K562ILF2
TBXA2RENSG00000006638.730.7963085.08640-1.466204.064802.91490K562KRR1
TBXA2RENSG00000006638.7127.6929070.070200.865703.131201.47860K562LSM11
TBXA2RENSG00000006638.7269.80990161.916400.736602.869401.93950K562MBNL1
TBXA2RENSG00000006638.778.56370204.10380-1.3774010.395808.93380K562MTPAP
TBXA2RENSG00000006638.7116.71350226.77620-0.958306.641405.55300K562NSUN2
TBXA2RENSG00000006638.752.51510182.66020-1.798408.953407.46230K562PCBP3
TBXA2RENSG00000006638.744.63410140.09340-1.650208.464807.09170K562POLR2G
TBXA2RENSG00000006638.7125.2408070.507700.828802.947402.00900K562PSIP1
TBXA2RENSG00000006638.7252.3414072.478601.7996018.8172017.16570K562PTBP1
TBXA2RENSG00000006638.761.64550135.09210-1.131904.775004.08630K562PUS1
TBXA2RENSG00000006638.7147.1707067.744201.119205.337403.21260K562RBM34
TBXA2RENSG00000006638.772.1248032.849801.134502.271201.37460K562RPS3
TBXA2RENSG00000006638.7105.49740205.21710-0.959904.830102.45800K562SAFB2
TBXA2RENSG00000006638.766.84030124.86810-0.901603.207002.04110K562SAFB
TBXA2RENSG00000006638.796.51490223.77240-1.213209.023707.61190K562SF3A3
TBXA2RENSG00000006638.761.93920121.29030-0.969503.612802.15150K562SLBP
TBXA2RENSG00000006638.7117.9357060.954000.952103.295302.15000K562SRFBP1
TBXA2RENSG00000006638.7153.58110229.25990-0.578003.022702.05040K562SRPK2
TBXA2RENSG00000006638.747.94550125.59080-1.389303.463301.34100K562SUGP2
TBXA2RENSG00000006638.7116.0715069.364000.742702.424001.66320K562TIA1
TBXA2RENSG00000006638.7116.5236068.083800.775102.407501.40330K562TRA2A
TBXA2RENSG00000006638.7170.85690240.45580-0.493002.336501.67350K562UPF1
TBXA2RENSG00000006638.7117.31760189.32710-0.690502.919301.68180K562UTP3
TBXA2RENSG00000006638.793.72960205.75020-1.134307.434705.95940K562WDR3
TBXA2RENSG00000006638.7102.37810213.95760-1.063407.935006.57240K562WDR43
TBXA2RENSG00000006638.7150.88080238.76730-0.662202.483601.67410K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TBXA2R is not available on ENCORE database.






No RBPs affect the alternative splcing events of TBXA2R on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TBXA2R is not avaliable on ENCORE database.