SSX2

General Information

Gene Name       : SSX2
Gene ID             : ENSG00000241476.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SSX2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SSX2ENSG00000241476.80.000.000.00ENCSR000AEF
HepG2SSX2ENSG00000241476.80.000.060.03ENCSR985KAT
K562SSX2ENSG00000241476.881.6557.5369.59ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SSX2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on SSX2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SSX2 is not avaliable on ENCORE database.






NO known proteins are bound to SSX2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SSX2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SSX2 is not available on ENCORE database.

  • 34 RBPs can affect the levels of SSX2.  








The Knockdown/knockout RNA-Seq assay for SSX2 is not available on ENCORE database.





34 RBPs can affect the gene expression of SSX2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SSX2ENSG00000241476.3104.14250289.45030-1.474808.102205.77610K562BCCIP
SSX2ENSG00000241476.3174.49010279.72430-0.680904.562703.31300K562BCLAF1
SSX2ENSG00000241476.368.35840231.07570-1.757203.103702.17810K562BOP1
SSX2ENSG00000241476.3126.68140260.18170-1.038308.096105.55450K562CEBPZ
SSX2ENSG00000241476.3251.73060415.42450-0.722703.349302.15910K562CNOT7
SSX2ENSG00000241476.3146.60430299.05650-1.028504.997103.33520K562DDX21
SSX2ENSG00000241476.3315.60850179.254200.816005.262802.45760K562DDX28
SSX2ENSG00000241476.3149.94200231.65230-0.627603.356101.94320K562EXOSC5
SSX2ENSG00000241476.392.89960250.02970-1.428402.577601.75340K562FMR1
SSX2ENSG00000241476.3313.03270175.403000.835503.316601.71620K562G3BP1
SSX2ENSG00000241476.3548.31650289.410600.921804.331802.69730K562HNRNPA2B1
SSX2ENSG00000241476.3175.16980388.73630-1.150003.467201.68580K562HNRNPAB
SSX2ENSG00000241476.3187.60190279.32030-0.574203.222802.26230K562HNRNPU
SSX2ENSG00000241476.3133.00530311.35970-1.227104.391801.66620K562HNRNPUL1
SSX2ENSG00000241476.387.70600299.19840-1.7704015.2349011.78060K562IGF2BP1
SSX2ENSG00000241476.3114.80930296.46170-1.368604.570402.54010K562LSM11
SSX2ENSG00000241476.3164.96540338.79110-1.038202.099201.38920K562MTPAP
SSX2ENSG00000241476.3136.10790376.31880-1.467202.306301.61890K562NSUN2
SSX2ENSG00000241476.3283.73820176.130400.687803.616501.40680K562PA2G4
SSX2ENSG00000241476.3139.08140399.10050-1.5208011.866009.36810K562PABPC1
SSX2ENSG00000241476.382.75410324.83350-1.972807.139904.80640K562PHF6
SSX2ENSG00000241476.3111.91880226.00860-1.013906.741305.50160K562POLR2G
SSX2ENSG00000241476.3303.92110163.373900.895404.644703.67400K562PRPF8
SSX2ENSG00000241476.3260.04990179.640700.533602.652601.83080K562RBM22
SSX2ENSG00000241476.3126.85240311.44010-1.295805.829003.37890K562RBM39
SSX2ENSG00000241476.3108.62720208.21350-0.938705.082003.12160K562SDAD1
SSX2ENSG00000241476.3104.19380223.14540-1.098702.817901.83520K562SF3B1
SSX2ENSG00000241476.392.96670282.23000-1.602108.012405.41380K562SFPQ
SSX2ENSG00000241476.3178.70450266.89700-0.578703.558602.21820K562SRSF7
SSX2ENSG00000241476.387.39380287.00580-1.715502.652401.73880K562TIAL1
SSX2ENSG00000241476.3113.76990304.70480-1.421305.147003.75870K562TRIM56
SSX2ENSG00000241476.396.95970214.22360-1.143704.747002.36660K562TRNAU1AP
SSX2ENSG00000241476.3107.09900167.43620-0.644702.208001.30590K562UCHL5
SSX2ENSG00000241476.3141.07670312.89190-1.149204.790702.41700K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SSX2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SSX2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SSX2 is not avaliable on ENCORE database.