RP11-481J13.1

General Information

Gene Name       : RP11-481J13.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-481J13.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-481J13.1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on RP11-481J13.1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP11-481J13.1 is not avaliable on ENCORE database.






NO known proteins are bound to RP11-481J13.1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP11-481J13.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-481J13.1 is not available on ENCORE database.

  • 19 RBPs can affect the levels of RP11-481J13.1.  








The Knockdown/knockout RNA-Seq assay for RP11-481J13.1 is not available on ENCORE database.





19 RBPs can affect the gene expression of RP11-481J13.1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-481J13.1ENSG00000272180.149.8297017.401301.517701.996401.32180K562CPSF6
RP11-481J13.1ENSG00000272180.16.0544024.75370-2.031602.849602.18830K562DDX47
RP11-481J13.1ENSG00000272180.13.6337016.79720-2.208702.035301.34440K562EIF3G
RP11-481J13.1ENSG00000272180.14.7786033.45270-2.807505.091904.30580K562FXR1
RP11-481J13.1ENSG00000272180.162.4178022.203901.491003.618102.94680K562HNRNPC
RP11-481J13.1ENSG00000272180.145.0830019.535001.206402.034401.33590K562MTPAP
RP11-481J13.1ENSG00000272180.145.8084021.703301.077601.999801.35320K562NSUN2
RP11-481J13.1ENSG00000272180.1112.3338024.342202.206205.710804.13800K562PABPN1
RP11-481J13.1ENSG00000272180.181.4728028.913701.494503.111101.53200K562PPP1R8
RP11-481J13.1ENSG00000272180.12.9703019.64780-2.725703.353402.62980K562PTBP1
RP11-481J13.1ENSG00000272180.119.5869050.71100-1.372402.371401.45320K562RPS3
RP11-481J13.1ENSG00000272180.1123.4400025.572402.271008.248805.70890K562SNRNP200
RP11-481J13.1ENSG00000272180.1109.0560030.572001.834705.188703.03130K562SUPT6H
RP11-481J13.1ENSG00000272180.13.4934017.22020-2.301402.240801.50080K562SYNCRIP
RP11-481J13.1ENSG00000272180.158.3811023.012701.343003.356902.57010K562UPF1
RP11-481J13.1ENSG00000272180.142.9894019.691001.126302.075601.31910K562WDR3
RP11-481J13.1ENSG00000272180.191.4527025.958301.816705.015702.63640K562XPO5
RP11-481J13.1ENSG00000272180.182.0189030.077001.447202.971201.31910K562YTHDC2
RP11-481J13.1ENSG00000272180.163.0797027.062901.220803.342702.38250K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-481J13.1 is not available on ENCORE database.





1 RBPs can affect the splicing of RP11-481J13.1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERP11-481J13.1ENSG00000272180.1chr2+5638239556382476563747645637487556397135563973300.285000.001330.03487includedK562AGGF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RP11-481J13.1 is not avaliable on ENCORE database.