RP11-464F9.1

General Information

Gene Name : RP11-464F9.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-464F9.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-464F9.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-464F9.1 RNA is bound by 15 proteins.

eCLIP assay for RP11-464F9.1 is not avaliable on ENCORE database.

15 proteins are bound to RP11-464F9.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	75487118	75487220	-	intron-Distal	5.13011	7.39496	HepG2	BCLAF1
chr10	75490119	75490219	-	intron-Distal	3.81112	5.29681	HepG2	NCBP2
chr10	75478928	75478966	-	intron-Distal,intron-Proximal	3.49859	3.27569	HepG2	BCLAF1
chr10	75464707	75464797	-	intron-Distal,intron-Proximal	3.54298	3.54718	K562	PRPF8
chr10	75478600	75478623	-	intron-Distal	3.83324	3.60940	HepG2	HNRNPC
chr10	75478988	75479058	-	intron-Distal,intron-Proximal	3.88516	7.71102	K562	ZNF622
chr10	75475892	75475967	-	intron-Distal	4.77680	14.19929	HepG2	U2AF2
chr10	75490171	75490217	-	intron-Distal	3.44217	3.90826	K562	ZNF622
chr10	75480335	75480418	-	intron-Distal,intron-Proximal	3.90638	7.65975	HepG2	BCLAF1
chr10	75475896	75475959	-	intron-Distal	4.72336	5.29744	K562	U2AF2
chr10	75478970	75479059	-	intron-Distal,intron-Proximal	4.14495	4.28220	HepG2	GRWD1
chr10	75475969	75476001	-	intron-Distal	3.53409	8.13921	K562	KHSRP
chr10	75475896	75475942	-	intron-Distal	3.80820	3.76069	K562	U2AF1
chr10	75475891	75475944	-	intron-Distal	3.81942	3.66257	HepG2	U2AF1
chr10	75476942	75477011	-	intron-Distal	4.66836	12.79832	K562	KHSRP
chr10	75476272	75476321	-	intron-Distal	4.11345	3.75546	HepG2	KHSRP
chr10	75481213	75481261	-	intron-Distal	3.62815	3.95301	K562	ZNF622
chr10	75476932	75476970	-	intron-Distal	4.24286	3.79000	HepG2	U2AF2
chr10	75476074	75476133	-	intron-Distal	5.01003	4.82195	HepG2	XPO5
chr10	75480294	75480322	-	intron-Distal,intron-Proximal	3.25864	3.34848	HepG2	PPIG
chr10	75487162	75487230	-	intron-Distal	4.78418	5.78736	K562	ZNF622
chr10	75477427	75477485	-	intron-Distal	4.04037	6.44495	HepG2	U2AF2
chr10	75475963	75476021	-	intron-Distal	3.23068	3.81210	HepG2	KHSRP
chr10	75484422	75484567	-	intron-Distal	3.20977	3.06355	HepG2	KHSRP
chr10	75476001	75476033	-	intron-Distal	3.90381	10.23826	K562	KHSRP
chr10	75481118	75481162	-	intron-Distal,intron-Proximal	3.52688	3.87469	HepG2	BCLAF1
chr10	75481122	75481175	-	intron-Distal	3.92810	3.01428	K562	UCHL5
chr10	75477011	75477037	-	intron-Distal	4.36859	10.17772	K562	KHSRP
chr10	75483430	75483552	-	intron-Distal	3.85960	9.44690	K562	TARDBP
chr10	75477634	75477700	-	intron-Distal,intron-Proximal	3.20314	4.21588	K562	PRPF8
chr10	75484338	75484467	-	intron-Distal	4.39487	9.06934	K562	KHSRP
chr10	75478045	75478100	-	intron-Distal	3.72757	4.77518	HepG2	U2AF2
chr10	75480295	75480335	-	intron-Distal,intron-Proximal	3.44192	5.15500	HepG2	BCLAF1
chr10	75476033	75476060	-	intron-Distal	3.26672	4.81136	K562	KHSRP
chr10	75481207	75481258	-	intron-Distal	4.17689	3.79199	HepG2	PPIG
chr10	75476266	75476333	-	intron-Distal	4.83198	7.52645	K562	TARDBP
chr10	75484467	75484543	-	intron-Distal	4.85056	7.01496	K562	KHSRP
chr10	75483969	75484024	-	intron-Distal	3.28266	3.76090	HepG2	U2AF2
chr10	75480295	75480409	-	intron-Distal,intron-Proximal	3.21147	9.10317	K562	ZNF622
chr10	75464714	75464791	-	intron-Distal,intron-Proximal	4.72744	5.34978	HepG2	PRPF8
chr10	75481209	75481263	-	intron-Distal,intron-Proximal	4.81936	5.23259	HepG2	BCLAF1
chr10	75488216	75488290	-	intron-Distal	3.74130	4.93978	HepG2	BCLAF1
chr10	75475513	75475579	-	intron-Distal,intron-Proximal	4.51494	5.18111	K562	CSTF2T
chr10	75488229	75488319	-	intron-Distal	4.20538	11.72700	K562	ZNF622
chr10	75478623	75478649	-	intron-Distal	3.75124	3.15106	HepG2	HNRNPC
chr10	75457305	75457428	-	CDS,intron-Distal	3.71714	3.41051	HepG2	SRSF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-464F9.1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-464F9.1 is not available on ENCORE database.
19 RBPs can affect the levels of RP11-464F9.1.

The Knockdown/knockout RNA-Seq assay for RP11-464F9.1 is not available on ENCORE database.

19 RBPs can affect the gene expression of RP11-464F9.1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-464F9.1	ENSG00000242288.6	62.00520	19.41630	1.67500	4.01900	2.83080	HepG2	CCAR1
RP11-464F9.1	ENSG00000242288.6	5.61210	26.28380	-2.22760	2.45200	1.86000	HepG2	DDX3X
RP11-464F9.1	ENSG00000242288.6	38.00350	14.09140	1.43120	2.56910	1.62380	HepG2	DHX30
RP11-464F9.1	ENSG00000242288.6	36.36880	6.47840	2.48890	4.36910	3.39360	HepG2	FUBP3
RP11-464F9.1	ENSG00000242288.6	67.93350	22.69330	1.58180	2.81830	2.11280	HepG2	HNRNPK
RP11-464F9.1	ENSG00000242288.6	53.98070	24.22550	1.15580	2.10930	1.51070	HepG2	HNRNPL
RP11-464F9.1	ENSG00000242288.6	5.23880	24.90770	-2.24930	1.85490	1.32960	HepG2	NCBP2
RP11-464F9.1	ENSG00000242288.6	63.81760	31.34050	1.02580	2.05400	1.40530	HepG2	NSUN2
RP11-464F9.1	ENSG00000242288.6	41.92650	16.12790	1.37820	2.34100	1.55480	HepG2	PARN
RP11-464F9.1	ENSG00000242288.6	41.81730	17.10220	1.28980	2.15540	1.60640	HepG2	RPS19
RP11-464F9.1	ENSG00000242288.6	6.27240	65.43970	-3.38310	10.01040	7.78440	K562	AARS
RP11-464F9.1	ENSG00000242288.6	46.24540	17.37430	1.41230	2.93370	1.84220	K562	CCAR1
RP11-464F9.1	ENSG00000242288.6	92.44220	146.85160	-0.66770	2.68940	1.53250	K562	CCDC124
RP11-464F9.1	ENSG00000242288.6	82.67830	137.60030	-0.73490	3.08050	2.14920	K562	DKC1
RP11-464F9.1	ENSG00000242288.6	59.72720	18.68460	1.67640	4.31370	2.61110	K562	DNAJC21
RP11-464F9.1	ENSG00000242288.6	56.24420	17.54820	1.68030	2.86190	1.35380	K562	KHDRBS1
RP11-464F9.1	ENSG00000242288.6	84.21940	152.01030	-0.85190	3.89500	2.78640	K562	MBNL1
RP11-464F9.1	ENSG00000242288.6	48.62780	88.46680	-0.86340	2.50320	1.74380	K562	POLR2G
RP11-464F9.1	ENSG00000242288.6	172.29220	102.41580	0.75030	2.34910	1.60960	K562	U2AF2
RP11-464F9.1	ENSG00000242288.6	164.66510	107.05380	0.62110	2.54480	1.72390	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-464F9.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-464F9.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-464F9.1 is not avaliable on ENCORE database.

15 proteins are bound to RP11-464F9.1 RNA:

eCLIP assay for RP11-464F9.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-464F9.1 is not available on ENCORE database.

19 RBPs can affect the gene expression of RP11-464F9.1 :

The Knockdown/knockout RNA-Seq assay for RP11-464F9.1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-464F9.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-464F9.1 is not avaliable on ENCORE database.