RP11-119D9.1

General Information

Gene Name       : RP11-119D9.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-119D9.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-119D9.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-119D9.1 RNA is bound by 11 proteins.  







eCLIP assay for RP11-119D9.1 is not avaliable on ENCORE database.





11 proteins are bound to RP11-119D9.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr116766317067663216+intron-Distal5.879559.12356HepG2RBM22
chr116766316967663214+intron-Distal7.2476863.81825K562PRPF8
chr116766314567663219+intron-Distal5.9996312.58447K562RBM22
chr116766316567663212+intron-Distal4.987856.40957HepG2EFTUD2
chr116766313767663213+intron-Distal4.602046.68498K562QKI
chr116766317467663209+intron-Distal7.8091650.29799K562SMNDC1
chr116766317567663216+intron-Distal5.8838415.00987HepG2QKI
chr116766317267663215+intron-Distal3.922595.36555HepG2BCLAF1
chr116766316867663217+intron-Distal3.784597.64728K562AQR
chr116766317267663216+intron-Distal6.8102235.76729HepG2BUD13
chr116766317367663214+intron-Distal4.899684.84473K562LSM11
chr116766316967663212+intron-Distal3.478663.39008HepG2AQR
chr116766317267663175+intron-Distal4.815007.11758HepG2QKI
chr116766317367663216+intron-Distal4.270984.89564K562GPKOW
chr116766317267663214+intron-Distal3.808883.07260HepG2AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-119D9.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-119D9.1 is not available on ENCORE database.

  • 26 RBPs can affect the levels of RP11-119D9.1.  








The Knockdown/knockout RNA-Seq assay for RP11-119D9.1 is not available on ENCORE database.





26 RBPs can affect the gene expression of RP11-119D9.1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-119D9.1ENSG00000251637.24.0834019.91920-2.286302.134001.66070HepG2AKAP1
RP11-119D9.1ENSG00000251637.251.2030016.481301.635303.477902.59780HepG2ASCC1
RP11-119D9.1ENSG00000251637.2145.5628015.658403.2165019.6034017.76110HepG2CIRBP
RP11-119D9.1ENSG00000251637.216.946201.632203.376003.329502.61130HepG2CKAP4
RP11-119D9.1ENSG00000251637.218.340901.050904.125303.167901.79490HepG2DDX27
RP11-119D9.1ENSG00000251637.22.3908016.39160-2.777402.268501.70370HepG2DDX6
RP11-119D9.1ENSG00000251637.233.154501.565304.404607.406706.39990HepG2DKC1
RP11-119D9.1ENSG00000251637.216.453201.411003.543502.379001.78180HepG2GPKOW
RP11-119D9.1ENSG00000251637.2111.526201.410206.3052027.7337026.08470HepG2HNRNPA1
RP11-119D9.1ENSG00000251637.219.775101.568303.656402.444301.78950HepG2HNRNPC
RP11-119D9.1ENSG00000251637.216.801301.346603.641103.135202.47000HepG2HNRNPLL
RP11-119D9.1ENSG00000251637.222.731701.557903.866905.030804.23340HepG2HNRNPU
RP11-119D9.1ENSG00000251637.29.946000.928703.420802.215401.56300HepG2IGF2BP1
RP11-119D9.1ENSG00000251637.220.795900.471805.461804.624403.59840HepG2MSI2
RP11-119D9.1ENSG00000251637.253.618301.194305.4883012.9413011.44410HepG2NSUN2
RP11-119D9.1ENSG00000251637.211.731601.389603.077602.285001.60820HepG2PPIL4
RP11-119D9.1ENSG00000251637.228.148201.507804.222406.509505.37840HepG2PRPF4
RP11-119D9.1ENSG00000251637.210.366500.869403.575602.076201.37240HepG2PRPF8
RP11-119D9.1ENSG00000251637.221.804003.135302.797803.005102.30590HepG2PUM2
RP11-119D9.1ENSG00000251637.277.963501.667105.5473014.3350013.12390HepG2PUS1
RP11-119D9.1ENSG00000251637.2233.213601.995706.8685069.7599068.06510HepG2SSB
RP11-119D9.1ENSG00000251637.224.590501.117004.460404.645203.80320HepG2SUPV3L1
RP11-119D9.1ENSG00000251637.214.445801.515103.253102.737302.23890HepG2TIAL1
RP11-119D9.1ENSG00000251637.224.716106.711101.880702.258101.70530HepG2UTP3
RP11-119D9.1ENSG00000251637.248.697501.099505.468908.732207.46140HepG2XRN2
RP11-119D9.1ENSG00000251637.297.459807.644903.6721019.7351018.60320HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-119D9.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-119D9.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-119D9.1 is not avaliable on ENCORE database.