MCF2L2

General Information

Gene Name       : MCF2L2
Gene ID             : ENSG00000053524.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MCF2L2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MCF2L2ENSG00000053524.120.600.830.71ENCSR000AEF
HepG2MCF2L2ENSG00000053524.120.050.110.08ENCSR985KAT
K562MCF2L2ENSG00000053524.121.231.291.26ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MCF2L2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MCF2L2 RNA is bound by 2 proteins.  







eCLIP assay for MCF2L2 is not avaliable on ENCORE database.





2 proteins are bound to MCF2L2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3183027503183027590-CDS,intron-Distal,intron-Proximal3.978373.20027K562ZNF622
chr3183145571183145650-intron-Distal4.340015.23751K562TIA1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MCF2L2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MCF2L2 is not available on ENCORE database.

  • 28 RBPs can affect the levels of MCF2L2.  








The Knockdown/knockout RNA-Seq assay for MCF2L2 is not available on ENCORE database.





28 RBPs can affect the gene expression of MCF2L2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MCF2L2ENSG00000053524.718.818900.0000099999.999904.492303.83650HepG2AKAP1
MCF2L2ENSG00000053524.7143.92290253.51130-0.816805.108904.37650K562AGGF1
MCF2L2ENSG00000053524.7158.61530263.79050-0.733904.073203.27940K562AKAP8L
MCF2L2ENSG00000053524.7176.85590276.78070-0.646203.966702.85530K562ATP5C1
MCF2L2ENSG00000053524.7204.79570113.181100.855504.712802.71520K562CEBPZ
MCF2L2ENSG00000053524.7185.07950106.675300.794803.753902.84100K562CPSF6
MCF2L2ENSG00000053524.7403.67220307.285300.393502.175301.31180K562CELF1
MCF2L2ENSG00000053524.7226.77570130.092400.801603.440802.08800K562DDX21
MCF2L2ENSG00000053524.7189.82270283.85440-0.580503.441602.45020K562DKC1
MCF2L2ENSG00000053524.7144.0231092.027900.646102.182001.37490K562FTO
MCF2L2ENSG00000053524.745.30850111.66920-1.301405.669504.84780K562FXR1
MCF2L2ENSG00000053524.7221.21910127.920400.790104.565303.19270K562HNRNPA1
MCF2L2ENSG00000053524.7258.91000141.653200.870006.125904.78540K562HNRNPU
MCF2L2ENSG00000053524.7186.16060267.97860-0.525602.240501.30640K562MAK16
MCF2L2ENSG00000053524.7168.46200313.61040-0.896606.251004.77980K562MBNL1
MCF2L2ENSG00000053524.7219.97610126.918400.793304.586003.56690K562MTPAP
MCF2L2ENSG00000053524.7136.92930219.81830-0.682902.461001.64060K562NAA15
MCF2L2ENSG00000053524.7202.60780141.023500.522702.318501.62950K562NSUN2
MCF2L2ENSG00000053524.780.82210161.08760-0.995002.846001.83790K562PABPN1
MCF2L2ENSG00000053524.7213.51270133.895700.673102.778401.94530K562PCBP3
MCF2L2ENSG00000053524.738.9686093.43350-1.261603.916903.02620K562PRPF8
MCF2L2ENSG00000053524.763.88610132.92200-1.057005.029104.15700K562PTBP1
MCF2L2ENSG00000053524.7137.55650261.60430-0.927405.357004.63290K562PUS1
MCF2L2ENSG00000053524.7130.93680254.89690-0.961006.443205.56450K562RBM15
MCF2L2ENSG00000053524.7134.9738075.528200.837503.198001.83190K562SLBP
MCF2L2ENSG00000053524.7210.47500116.103500.858105.103503.49500K562SRSF7
MCF2L2ENSG00000053524.755.64800103.00990-0.888402.752601.93510K562SYNCRIP
MCF2L2ENSG00000053524.7295.66230176.269200.746104.913303.71030K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MCF2L2 is not available on ENCORE database.





1 RBPs can affect the splicing of MCF2L2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMCF2L2ENSG00000053524.7chr3-1830283031830284431830275031830276231830287021830288170.667000.002340.03865includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MCF2L2 is not avaliable on ENCORE database.