LINC00324

General Information

Gene Name       : LINC00324
Gene ID             : ENSG00000178977.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LINC00324)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LINC00324ENSG00000178977.30.470.600.53ENCSR000AEF
HepG2LINC00324ENSG00000178977.30.130.210.17ENCSR985KAT
K562LINC00324ENSG00000178977.30.240.070.15ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LINC00324 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LINC00324 RNA is bound by 8 proteins.  







eCLIP assay for LINC00324 is not avaliable on ENCORE database.





8 proteins are bound to LINC00324 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1781255818125616-intron-Distal,intron-Proximal3.9010521.31545K562GEMIN5
chr1781255588125578-intron-Distal,intron-Proximal5.42832400.00000K562HNRNPM
chr1781255558125581-intron-Distal,intron-Proximal3.8193811.91719K562GEMIN5
chr1781255498125588-intron-Distal,intron-Proximal3.3441715.65367K562WRN
chr1781261378126147-intron-Distal8.91812400.00000K562NSUN2
chr1781255888125619-intron-Distal,intron-Proximal3.6611716.96634K562WRN
chr1781256038125609-intron-Distal,intron-Proximal4.6006448.04956HepG2HNRNPM
chr1781255848125603-intron-Distal,intron-Proximal3.43720400.00000HepG2HNRNPM
chr1781261478126174-intron-Distal8.80744400.00000K562NSUN2
chr1781261378126203-intron-Distal3.912359.44859K562LIN28B
chr1781255398125635-intron-Distal,intron-Proximal4.3298438.08774HepG2XPO5
chr1781241788124201-intron-Distal8.30521162.01176K562NSUN2
chr1781255968125618-intron-Distal,intron-Proximal4.319439.62803K562XRCC6
chr1781256178125635-intron-Distal5.6516839.06342HepG2HNRNPM
chr1781255528125621-intron-Distal,intron-Proximal3.1830313.48274K562PCBP1
chr1781255608125596-intron-Distal,intron-Proximal3.5062020.01233K562XRCC6
chr1781255508125560-intron-Distal,intron-Proximal3.2369211.79822K562XRCC6
chr1781256188125634-intron-Distal4.5204313.29822K562HNRNPM
chr1781255788125618-intron-Distal,intron-Proximal5.22535400.00000K562HNRNPM
chr1781255278125558-intron-Distal,intron-Proximal5.58683400.00000K562HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LINC00324 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LINC00324 is not available on ENCORE database.

  • 27 RBPs can affect the levels of LINC00324.  








The Knockdown/knockout RNA-Seq assay for LINC00324 is not available on ENCORE database.





27 RBPs can affect the gene expression of LINC00324 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LINC00324ENSG00000178977.390.171309.449103.254308.756707.02860HepG2CCAR1
LINC00324ENSG00000178977.331.066907.074202.134603.628002.88400HepG2CKAP4
LINC00324ENSG00000178977.322.778106.547801.798502.477201.68420HepG2DDX19B
LINC00324ENSG00000178977.322.026304.089502.429103.088402.05820HepG2DHX30
LINC00324ENSG00000178977.323.899206.775301.818502.174201.56270HepG2DKC1
LINC00324ENSG00000178977.324.338704.233002.523402.945702.28700HepG2GPKOW
LINC00324ENSG00000178977.325.116104.761702.399002.822402.12310HepG2HNRNPC
LINC00324ENSG00000178977.319.268204.730102.026202.203801.65660HepG2HNRNPU
LINC00324ENSG00000178977.326.831407.851301.772802.303801.64140HepG2IGF2BP1
LINC00324ENSG00000178977.369.0671015.407402.164306.476805.48400HepG2MAGOH
LINC00324ENSG00000178977.337.4941014.117301.409102.305201.64160HepG2PABPC4
LINC00324ENSG00000178977.3115.819408.802103.7178019.1469016.49120HepG2PRPF6
LINC00324ENSG00000178977.3204.896106.304405.0223046.3196044.69740HepG2RBM22
LINC00324ENSG00000178977.334.916707.949202.134903.845802.73240HepG2RPS10
LINC00324ENSG00000178977.323.702605.508702.105202.406601.82850HepG2RPS19
LINC00324ENSG00000178977.328.062808.425301.735802.425301.67220HepG2RPS2
LINC00324ENSG00000178977.351.117405.664503.173705.152503.07940HepG2SFPQ
LINC00324ENSG00000178977.320.992707.114301.561001.971801.36160HepG2SLBP
LINC00324ENSG00000178977.3106.012104.303904.6223019.5285016.76860HepG2SRSF3
LINC00324ENSG00000178977.351.536106.179303.060008.603207.79740HepG2SSB
LINC00324ENSG00000178977.327.647208.589801.686302.576801.51980HepG2STIP1
LINC00324ENSG00000178977.338.560804.592003.069906.354605.65330HepG2TIAL1
LINC00324ENSG00000178977.354.309606.273103.1139010.034108.59050HepG2UCHL5
LINC00324ENSG00000178977.358.036908.496802.771908.212807.27000HepG2UTP3
LINC00324ENSG00000178977.3154.117205.802304.7312030.4005028.65260K562AQR
LINC00324ENSG00000178977.317.437300.920604.243304.048503.05720K562EIF4A3
LINC00324ENSG00000178977.319.572402.859402.775002.763801.96950K562GPKOW
LINC00324ENSG00000178977.3105.842702.062205.6815024.8195023.10670K562HNRNPC
LINC00324ENSG00000178977.324.302903.681902.722503.474801.37080K562PRPF6
LINC00324ENSG00000178977.337.633405.711502.720002.809301.98670K562PUF60
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LINC00324 is not available on ENCORE database.






No RBPs affect the alternative splcing events of LINC00324 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LINC00324 is not avaliable on ENCORE database.