HIST1H2AD

General Information

Gene Name       : HIST1H2AD
Gene ID             : ENSG00000196866.2
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIST1H2AD)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HIST1H2ADENSG00000196866.20.000.000.00ENCSR000AEF
HepG2HIST1H2ADENSG00000196866.20.170.000.09ENCSR985KAT
K562HIST1H2ADENSG00000196866.29.680.004.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIST1H2AD is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIST1H2AD RNA is bound by 11 proteins.  







eCLIP assay for HIST1H2AD is not avaliable on ENCORE database.





11 proteins are bound to HIST1H2AD RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62619907726199146-3'-UTR,5'-UTR,CDS,intron-Distal6.29208400.00000K562SLBP
chr62619906926199080-3'-UTR,intron-Distal3.8862718.19224K562YBX3
chr62619908026199102-3'-UTR,5'-UTR,CDS,intron-Distal4.1749625.37790K562YBX3
chr62619907926199087-3'-UTR,CDS,intron-Distal3.688274.20978K562AQR
chr62619912626199132-5'-UTR,CDS,intron-Distal4.4134763.81132K562YBX3
chr62619913826199155-5'-UTR,CDS,intron-Distal3.3384511.79091K562RPS3
chr62619915426199169-5'-UTR,CDS,intron-Distal4.8804046.27655K562YBX3
chr62619920126199228-5'-UTR,CDS,intron-Distal4.660453.96931HepG2G3BP1
chr62619910626199142-5'-UTR,CDS,intron-Distal3.553535.02671K562PUM1
chr62619911026199114-5'-UTR,CDS,intron-Distal3.001059.17526K562YBX3
chr62619924726199289-5'-UTR,CDS,intron-Distal4.209279.14494K562PUM1
chr62619909226199162-5'-UTR,CDS,intron-Distal3.4044314.93521HepG2GRWD1
chr62619945326199488-5'-UTR,CDS,intron-Distal3.108777.78944K562GEMIN5
chr62619927126199304-5'-UTR,CDS,intron-Distal5.3120617.60264HepG2RPS3
chr62619919026199240-5'-UTR,CDS,intron-Distal4.0678213.43533HepG2GRWD1
chr62619909626199162-5'-UTR,CDS,intron-Distal5.366094.65414HepG2SND1
chr62619913226199154-5'-UTR,CDS,intron-Distal4.5531572.95086K562YBX3
chr62619932226199361-5'-UTR,CDS,intron-Distal5.4460420.31541HepG2RPS3
chr62619925526199295-5'-UTR,CDS,intron-Distal3.2889911.11589HepG2GRWD1
chr62619911426199126-5'-UTR,CDS,intron-Distal4.0294441.91357K562YBX3
chr62619936126199413-5'-UTR,CDS,intron-Distal5.8702426.35122HepG2RPS3
chr62619911726199161-5'-UTR,CDS,intron-Distal4.9099519.37398K562RBM15
chr62619933326199413-5'-UTR,CDS,intron-Distal4.8540061.95047K562RPS3
chr62619912426199142-5'-UTR,CDS,intron-Distal3.844429.49363HepG2RPS3
chr62619909626199160-5'-UTR,CDS,intron-Distal3.071365.22550HepG2G3BP1
chr62619919526199234-5'-UTR,CDS,intron-Distal4.749994.35919HepG2SND1
chr62619942426199479-5'-UTR,CDS,intron-Distal3.6761712.53882HepG2GRWD1
chr62619910526199157-5'-UTR,CDS,intron-Distal4.0892514.53471K562ZNF800
chr62619919626199247-5'-UTR,CDS,intron-Distal6.0345510.97921K562PUM1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIST1H2AD is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIST1H2AD is not available on ENCORE database.

  • 20 RBPs can affect the levels of HIST1H2AD.  








The Knockdown/knockout RNA-Seq assay for HIST1H2AD is not available on ENCORE database.





20 RBPs can affect the gene expression of HIST1H2AD :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIST1H2ADENSG00000196866.28.715700.0000099999.999902.603102.01020HepG2ACO1
HIST1H2ADENSG00000196866.217.439100.0000099999.999903.973403.20360HepG2CKAP4
HIST1H2ADENSG00000196866.27.035500.0000099999.999902.023901.31180HepG2EWSR1
HIST1H2ADENSG00000196866.228.416007.232001.974102.620401.81300HepG2LARP4
HIST1H2ADENSG00000196866.266.185002.126204.9601015.3154013.65470HepG2SF3A3
HIST1H2ADENSG00000196866.211.164300.0000099999.999903.864403.05630HepG2SLBP
HIST1H2ADENSG00000196866.233.252109.011301.883503.576601.84170K562AKAP1
HIST1H2ADENSG00000196866.284.1298012.098502.7977010.410007.96620K562CCAR1
HIST1H2ADENSG00000196866.217.907201.048804.093604.008602.45260K562CIRBP
HIST1H2ADENSG00000196866.2123.0814055.891501.138802.755901.33010K562CKAP4
HIST1H2ADENSG00000196866.264.0615012.777402.325804.930102.48610K562DDX1
HIST1H2ADENSG00000196866.265.6858028.311901.214103.414702.06800K562DDX21
HIST1H2ADENSG00000196866.225.845408.588701.589302.368201.32310K562EIF4B
HIST1H2ADENSG00000196866.294.6925052.053100.863202.232101.42960K562HNRNPU
HIST1H2ADENSG00000196866.218.647401.025404.184604.510703.30750K562MATR3
HIST1H2ADENSG00000196866.222.747501.000004.507504.375303.55790K562PTBP1
HIST1H2ADENSG00000196866.223.7169088.04340-1.892307.015505.25870K562PUM1
HIST1H2ADENSG00000196866.212.085000.933903.693802.681701.33520K562RBM34
HIST1H2ADENSG00000196866.269.8362013.302002.392205.729103.89930K562SLBP
HIST1H2ADENSG00000196866.221.690500.981204.466304.983204.03720K562SRSF1
HIST1H2ADENSG00000196866.253.1499015.075701.817703.672102.43510K562SRSF4
HIST1H2ADENSG00000196866.243.6957089.91790-1.041103.555702.60370K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIST1H2AD is not available on ENCORE database.






No RBPs affect the alternative splcing events of HIST1H2AD on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HIST1H2AD is not avaliable on ENCORE database.