GS1-259H13.10

General Information

Gene Name       : GS1-259H13.10
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GS1-259H13.10)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GS1-259H13.10 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GS1-259H13.10 RNA is bound by 31 proteins.  







eCLIP assay for GS1-259H13.10 is not avaliable on ENCORE database.





31 proteins are bound to GS1-259H13.10 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr79915634299156409+5'-UTR5.1826818.02476HepG2NCBP2
chr79915814199158232+5'-UTR,CDS,intron-Proximal3.453363.28108K562U2AF2
chr79915815199158232+5'-UTR,CDS,intron-Proximal4.823556.13877K562SRSF1
chr79915814499158226+5'-UTR,CDS,intron-Proximal3.427847.34034HepG2U2AF2
chr79915628499156393+5'-UTR4.2947610.63554K562DDX3X
chr79915626699156326+5'-UTR3.8159010.22490HepG2NCBP2
chr79915817299158334+5'-UTR,CDS,intron-Proximal3.364375.95627K562RBM15
chr79915627399156406+5'-UTR3.7220810.20469HepG2DDX3X
chr79915831199158416+CDS,intron-Proximal4.978666.74224HepG2AQR
chr79915823699158293+CDS4.681956.27382HepG2SRSF1
chr79915824199158280+CDS4.439934.67689HepG2PPIG
chr79915827999158358+CDS,intron-Proximal4.0688229.09169HepG2PRPF8
chr79916980999169861+intron-Distal,intron-Proximal3.726955.04653K562SF3B4
chr79919408899194129+intron-Distal4.128813.16986HepG2QKI
chr79917401099174059+3'-UTR,intron-Distal4.354964.39710K562CPSF6
chr79917388499173999+3'-UTR,intron-Distal4.029769.55659K562CPSF6
chr79916757199167616+intron-Distal3.695199.63789HepG2PCBP2
chr79917210899172174+3'-UTR,intron-Distal3.565146.67761K562UPF1
chr79917380699173930+3'-UTR,intron-Distal3.216265.66866K562KHSRP
chr79915835199158438+intron-Distal,intron-Proximal3.0062815.02844K562PRPF8
chr79917406299174136+3'-UTR,intron-Distal,polyA_site4.362743.88679HepG2CSTF2
chr79916241099162521+intron-Distal3.1040813.74244HepG2HNRNPL
chr79915984899159924+intron-Distal,intron-Proximal3.390937.30101HepG2U2AF1
chr79916035199160399+intron-Distal4.278004.75572K562MATR3
chr79917341099173465+3'-UTR,intron-Distal3.119844.62770HepG2HLTF
chr79915867199158752+intron-Distal3.423228.47512K562PTBP1
chr79915984699159928+intron-Distal,intron-Proximal3.7624716.82333HepG2U2AF2
chr79916016999160252+intron-Distal,intron-Proximal3.6717611.01502K562TIA1
chr79917204299172059+3'-UTR,intron-Distal3.213145.41344K562TIA1
chr79915866999158749+intron-Distal3.017684.53538HepG2MATR3
chr79916039999160470+intron-Distal3.757985.97215K562MATR3
chr79915840999158473+intron-Distal,intron-Proximal4.016146.87708HepG2EFTUD2
chr79915992899159988+CDS,intron-Distal,intron-Proximal5.0486720.96207HepG2U2AF2
chr79915905199159090+intron-Distal3.451066.21102HepG2MATR3
chr79915991299159986+CDS,intron-Distal,intron-Proximal4.581714.07325HepG2SF3B4
chr79916153799161591+3'-UTR,CDS,intron-Distal3.135383.19579K562HNRNPK
chr79916000899160084+CDS,intron-Distal4.086099.21611HepG2SRSF1
chr79915969199159736+intron-Distal,intron-Proximal3.744757.43659HepG2U2AF2
chr79917406399174159+3'-UTR,intron-Distal,polyA_site4.851867.47837K562CSTF2T
chr79915965599159682+intron-Distal,intron-Proximal5.5495010.40229HepG2U2AF2
chr79915919199159229+intron-Distal3.571357.27760HepG2SUGP2
chr79915891099158956+intron-Distal3.613765.45902K562TIA1
chr79917095899171005+3'-UTR,CDS,intron-Distal4.093116.23296HepG2BCLAF1
chr79916969099169795+intron-Distal,intron-Proximal3.300208.11893K562KHSRP
chr79915805299158112+intron-Distal,intron-Proximal3.923787.05443K562KHSRP
chr79917013199170242+3'-UTR,CDS,intron-Distal3.219217.61291HepG2BCLAF1
chr79915999699160122+CDS,intron-Distal,intron-Proximal3.591297.71951K562SRSF1
chr79915832899158442+intron-Distal,intron-Proximal4.2320917.16885K562EFTUD2
chr79915641599156526+5'-UTR,intron-Distal,intron-Proximal4.5883312.28583HepG2EFTUD2
chr79916637599166454+intron-Distal3.9250621.29092HepG2XPO5
chr79916223699162299+3'-UTR,intron-Distal3.754487.11970K562KHDRBS1
chr79916908899169155+intron-Distal,intron-Proximal3.257943.19579K562HNRNPK
chr79915870199158764+intron-Distal3.119565.15820K562MATR3
chr79916017499160226+intron-Distal,intron-Proximal3.136133.73965HepG2U2AF1
chr79915949099159580+CDS,intron-Distal,intron-Proximal4.3723216.53736HepG2U2AF2
chr79915835899158421+intron-Distal,intron-Proximal3.6991015.65006HepG2PRPF8
chr79917384999173951+3'-UTR,intron-Distal3.499149.04524HepG2ZC3H11A
chr79915862499158701+intron-Distal4.151786.71800K562MATR3
chr79915678299156853+intron-Distal4.919407.37772HepG2EFTUD2
chr79915642799156515+5'-UTR,intron-Distal,intron-Proximal3.545395.58816K562PRPF8
chr79915939799159454+intron-Distal,intron-Proximal3.757593.16983HepG2FUS
chr79916229999162359+3'-UTR,intron-Distal,polyA_site3.194253.62796K562KHDRBS1
chr79917385099173948+3'-UTR,intron-Distal4.636698.16838K562ZC3H11A
chr79915835999158397+intron-Proximal3.374886.21987K562AQR
chr79915834099158409+intron-Proximal4.2503727.36879HepG2EFTUD2
chr79915832199158411+intron-Proximal3.162913.13759K562XRN2
chr79915832599158359+intron-Proximal3.6133312.37936K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GS1-259H13.10 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GS1-259H13.10 is not available on ENCORE database.

  • 8 RBPs can affect the levels of GS1-259H13.10.  








The Knockdown/knockout RNA-Seq assay for GS1-259H13.10 is not available on ENCORE database.





8 RBPs can affect the gene expression of GS1-259H13.10 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GS1-259H13.10ENSG00000272647.111.811200.0000099999.999903.532002.86450HepG2BOP1
GS1-259H13.10ENSG00000272647.116.481700.0000099999.999905.059404.15420HepG2CPSF6
GS1-259H13.10ENSG00000272647.18.801500.0000099999.999902.992802.12770HepG2DDX19B
GS1-259H13.10ENSG00000272647.130.8221010.110201.608101.826901.31450HepG2DDX6
GS1-259H13.10ENSG00000272647.19.943100.0000099999.999902.853102.16600HepG2DKC1
GS1-259H13.10ENSG00000272647.136.091900.516406.126908.651907.47860HepG2HNRNPC
GS1-259H13.10ENSG00000272647.117.348800.513005.079504.666903.89660HepG2HNRNPU
GS1-259H13.10ENSG00000272647.19.638900.622203.953301.998401.34750HepG2NOL12
GS1-259H13.10ENSG00000272647.114.558700.534504.767503.801602.75220K562HNRNPU
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GS1-259H13.10 is not available on ENCORE database.






No RBPs affect the alternative splcing events of GS1-259H13.10 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GS1-259H13.10 is not avaliable on ENCORE database.