ETV3

General Information

Gene Name       : ETV3
Gene ID             : ENSG00000117036.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ETV3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ETV3ENSG00000117036.115.165.865.51ENCSR000AEF
HepG2ETV3ENSG00000117036.113.505.164.33ENCSR985KAT
K562ETV3ENSG00000117036.115.946.156.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ETV3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ETV3 RNA is bound by 6 proteins.  







eCLIP assay for ETV3 is not avaliable on ENCORE database.





6 proteins are bound to ETV3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1157094512157094542-3'-UTR,intron-Distal3.731353.31435K562PUM2
chr1157091215157091284-3'-UTR,intron-Distal4.114127.49879K562PUM2
chr1157092046157092142-3'-UTR,intron-Distal3.359774.39499K562FAM120A
chr1157094431157094497-3'-UTR,intron-Distal4.559074.97297K562TIA1
chr1157093527157093588-3'-UTR,intron-Distal4.276855.43239K562YBX3
chr1157094460157094504-3'-UTR,intron-Distal4.800108.44976K562PUM2
chr1157091160157091215-3'-UTR,intron-Distal4.310288.11238K562PUM2
chr1157108017157108109-5'-UTR,intron-Distal5.030165.17615K562AQR
chr1157095156157095231-CDS,intron-Distal4.262606.04229K562RBM15
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ETV3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ETV3 is not available on ENCORE database.

  • 38 RBPs can affect the levels of ETV3.  








The Knockdown/knockout RNA-Seq assay for ETV3 is not available on ENCORE database.





38 RBPs can affect the gene expression of ETV3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ETV3ENSG00000117036.7861.58000487.383800.821807.068206.26060HepG2AKAP1
ETV3ENSG00000117036.7125.80800216.37690-0.782302.791101.71050HepG2CSTF2
ETV3ENSG00000117036.7544.68340431.770000.335101.940701.38380HepG2CELF1
ETV3ENSG00000117036.7651.70960401.088200.700205.009204.19990HepG2DDX6
ETV3ENSG00000117036.7207.94280289.90780-0.479402.313201.41810HepG2DHX30
ETV3ENSG00000117036.7530.33360332.944000.671503.811702.92060HepG2FIP1L1
ETV3ENSG00000117036.7253.34580335.30950-0.404402.396901.82940HepG2HNRNPU
ETV3ENSG00000117036.7253.13700390.55890-0.625603.145401.82440HepG2HSPD1
ETV3ENSG00000117036.7269.23040342.50750-0.347301.953001.32380HepG2ILF2
ETV3ENSG00000117036.7403.91850269.443800.584003.633102.70740HepG2MSI2
ETV3ENSG00000117036.7610.58750442.640100.464002.640002.02000HepG2NCBP2
ETV3ENSG00000117036.7612.25900346.569400.820904.691103.51230HepG2PABPC1
ETV3ENSG00000117036.7531.47860421.809400.333302.275601.76970HepG2PTBP1
ETV3ENSG00000117036.7692.67890347.979100.993106.431705.38200HepG2RAVER1
ETV3ENSG00000117036.7491.65350386.594500.346702.236501.45490HepG2RBM15
ETV3ENSG00000117036.7709.94690484.483700.551205.798005.11680HepG2RBM22
ETV3ENSG00000117036.7551.41660336.223300.713603.782102.86350HepG2SNRNP70
ETV3ENSG00000117036.71125.11860547.207601.0398026.4753025.33820HepG2SRFBP1
ETV3ENSG00000117036.7517.22170325.147600.669603.958002.73880HepG2SRSF3
ETV3ENSG00000117036.7505.50160372.919500.438803.715503.09700HepG2SRSF9
ETV3ENSG00000117036.7251.04980325.81490-0.376101.783001.36330HepG2TIAL1
ETV3ENSG00000117036.7245.76280328.72840-0.419602.566402.01880HepG2TRIM56
ETV3ENSG00000117036.7742.18700284.801001.3817019.0768017.37600HepG2U2AF1
ETV3ENSG00000117036.7553.57880344.290200.685107.553006.64290HepG2UTP3
ETV3ENSG00000117036.75279.68260846.788302.64030134.02250130.62840K562AQR
ETV3ENSG00000117036.7799.36960527.438400.599805.283303.99760K562EFTUD2
ETV3ENSG00000117036.7854.29880496.502100.782809.473307.94440K562EIF4A3
ETV3ENSG00000117036.7718.15290516.342100.475904.712803.95220K562FXR1
ETV3ENSG00000117036.7512.24460840.26720-0.714007.282306.00860K562HSPD1
ETV3ENSG00000117036.7650.24850495.780700.391202.875301.62190K562NCBP2
ETV3ENSG00000117036.71372.196501082.569500.341902.808001.30930K562NOL12
ETV3ENSG00000117036.7932.05450594.322800.649106.874305.30770K562PCBP2
ETV3ENSG00000117036.7955.04310513.257300.8958010.841909.34450K562PRPF8
ETV3ENSG00000117036.71709.366701079.942700.662409.088407.59590K562PUF60
ETV3ENSG00000117036.71392.375201148.504600.277702.653801.61100K562PUM1
ETV3ENSG00000117036.7811.37190646.332300.328002.057701.57620K562PUS1
ETV3ENSG00000117036.7924.62750622.269100.571205.646204.39370K562RBM22
ETV3ENSG00000117036.7599.30220429.748300.479703.575102.03940K562RBM25
ETV3ENSG00000117036.7953.50290638.544500.578407.952806.62970K562SF3A3
ETV3ENSG00000117036.7661.66230471.153400.489804.366903.28410K562SF3B4
ETV3ENSG00000117036.7600.29730439.173000.450802.544201.50160K562U2AF1
ETV3ENSG00000117036.7717.70610453.640200.661707.458306.13970K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ETV3 is not available on ENCORE database.





1 RBPs can affect the splicing of ETV3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSETV3ENSG00000117036.7chr1-1571059821571061921571059821571061571571081071571081270.303000.001250.00850longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ETV3 is not avaliable on ENCORE database.