COX10-AS1

General Information

Gene Name       : COX10-AS1
Gene ID             : ENSG00000236088.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: COX10-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878COX10-AS1ENSG00000236088.913.1512.2912.72ENCSR000AEF
HepG2COX10-AS1ENSG00000236088.94.716.965.83ENCSR985KAT
K562COX10-AS1ENSG00000236088.913.2912.7513.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for COX10-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • COX10-AS1 RNA is bound by 5 proteins.  







eCLIP assay for COX10-AS1 is not avaliable on ENCORE database.





5 proteins are bound to COX10-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr171397263513972766-intron-Distal4.644665.05409HepG2NCBP2
chr171393438513934463-intron-Distal5.054055.05386K562PTBP1
chr171393754713937627-intron-Distal3.512874.09885HepG2BCLAF1
chr171393625413936332-intron-Distal3.147074.88847HepG2QKI
chr171396242413962531-intron-Distal4.646997.92050HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for COX10-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for COX10-AS1 is not available on ENCORE database.

  • 31 RBPs can affect the levels of COX10-AS1.  








The Knockdown/knockout RNA-Seq assay for COX10-AS1 is not available on ENCORE database.





31 RBPs can affect the gene expression of COX10-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
COX10-AS1ENSG00000236088.543.1262081.17920-0.912502.198001.49380HepG2ASCC1
COX10-AS1ENSG00000236088.549.2689089.32680-0.858402.552701.87270HepG2DNAJC21
COX10-AS1ENSG00000236088.540.90190108.26300-1.404304.419703.46370HepG2FIP1L1
COX10-AS1ENSG00000236088.572.68150118.00980-0.699201.841201.31170HepG2GPKOW
COX10-AS1ENSG00000236088.542.3407080.34160-0.924102.101101.34370HepG2PABPC1
COX10-AS1ENSG00000236088.579.53900129.72730-0.705702.496101.92590HepG2PUF60
COX10-AS1ENSG00000236088.560.94550137.60550-1.174905.615104.67320HepG2PUM2
COX10-AS1ENSG00000236088.5105.25810152.39710-0.533901.983701.53810HepG2SRFBP1
COX10-AS1ENSG00000236088.577.39780132.30080-0.773503.176902.63640HepG2SSB
COX10-AS1ENSG00000236088.536.2116092.19220-1.348203.593402.83790HepG2SUPV3L1
COX10-AS1ENSG00000236088.5145.83530344.67920-1.2409012.6892011.56930K562AGGF1
COX10-AS1ENSG00000236088.5223.97070378.74280-0.757905.735204.19440K562AKAP8
COX10-AS1ENSG00000236088.5125.84730358.65250-1.5109016.0499014.24510K562AKAP8L
COX10-AS1ENSG00000236088.5214.64080337.82980-0.654403.852103.18290K562AQR
COX10-AS1ENSG00000236088.5190.91750376.30930-0.979009.799807.95160K562ATP5C1
COX10-AS1ENSG00000236088.5257.06530411.91660-0.680205.531403.83130K562CCDC124
COX10-AS1ENSG00000236088.5103.47180199.69340-0.948505.440504.34870K562CPSF6
COX10-AS1ENSG00000236088.5260.83810404.40290-0.632604.316602.45970K562DDX19B
COX10-AS1ENSG00000236088.5273.76590385.94730-0.495503.318602.34950K562DKC1
COX10-AS1ENSG00000236088.5272.61170431.65110-0.663003.349102.31800K562EIF4G2
COX10-AS1ENSG00000236088.588.29210226.21950-1.357409.682807.98760K562FIP1L1
COX10-AS1ENSG00000236088.5120.27520190.66010-0.664702.776201.98070K562GPKOW
COX10-AS1ENSG00000236088.5185.85800380.62640-1.034209.140007.41820K562KIF1C
COX10-AS1ENSG00000236088.5208.40000364.34790-0.806005.547103.84550K562MAK16
COX10-AS1ENSG00000236088.5225.80280426.39680-0.917108.453106.68090K562MBNL1
COX10-AS1ENSG00000236088.5115.13700186.10470-0.692803.024102.10670K562METAP2
COX10-AS1ENSG00000236088.5177.70660298.87270-0.750003.464702.45420K562NAA15
COX10-AS1ENSG00000236088.5180.50950256.81890-0.508702.256901.51730K562PPIG
COX10-AS1ENSG00000236088.587.20110355.69810-2.0282022.2726020.75700K562PUS1
COX10-AS1ENSG00000236088.5120.98640346.56320-1.5183016.9062015.42220K562RBM15
COX10-AS1ENSG00000236088.5188.56950260.26130-0.464902.266101.61200K562UPF1
COX10-AS1ENSG00000236088.5162.18370360.62740-1.152905.914203.83840K562UTP18
COX10-AS1ENSG00000236088.5282.69880380.61070-0.429102.401901.60700K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for COX10-AS1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of COX10-AS1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for COX10-AS1 is not avaliable on ENCORE database.