CNTLN

General Information

Gene Name       : CNTLN
Gene ID             : ENSG00000044459.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CNTLN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CNTLNENSG00000044459.140.040.010.03ENCSR000AEF
HepG2CNTLNENSG00000044459.141.552.792.17ENCSR985KAT
K562CNTLNENSG00000044459.140.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CNTLN is not avaliable on ENCORE database.



Proteins bound to RNA
  • CNTLN RNA is bound by 1 proteins.  







eCLIP assay for CNTLN is not avaliable on ENCORE database.





1 proteins are bound to CNTLN RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr91713522417135417+CDS3.484066.20926HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CNTLN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CNTLN is not available on ENCORE database.

  • 22 RBPs can affect the levels of CNTLN.  








The Knockdown/knockout RNA-Seq assay for CNTLN is not available on ENCORE database.





22 RBPs can affect the gene expression of CNTLN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CNTLNENSG00000044459.10120.44510191.63690-0.670003.485502.81660HepG2ACO1
CNTLNENSG00000044459.10271.84970195.813500.473202.093401.41480HepG2CALR
CNTLNENSG00000044459.10338.11070201.567200.746104.562003.58240HepG2CIRBP
CNTLNENSG00000044459.1092.81950210.93650-1.184304.906204.10450HepG2DDX6
CNTLNENSG00000044459.10114.85240202.85650-0.820703.290002.64740HepG2EIF2S1
CNTLNENSG00000044459.10172.9757092.279900.906402.757301.49090HepG2FKBP4
CNTLNENSG00000044459.10116.09170226.11230-0.961803.757002.96010HepG2FXR1
CNTLNENSG00000044459.10114.12260176.95720-0.632802.330001.39810HepG2GNB2L1
CNTLNENSG00000044459.10144.71630212.31380-0.553002.035501.43020HepG2HNRNPK
CNTLNENSG00000044459.10411.75480244.245000.753405.091904.26430HepG2HNRNPLL
CNTLNENSG00000044459.1087.34410172.91810-0.985304.994003.75460HepG2HNRNPM
CNTLNENSG00000044459.10225.76160328.45110-0.540902.372301.60710HepG2LARP4
CNTLNENSG00000044459.10238.49610155.549800.616503.434902.58240HepG2PRPF4
CNTLNENSG00000044459.10210.10000294.37410-0.486602.572301.74320HepG2RBM15
CNTLNENSG00000044459.10188.9746096.635600.967502.700501.91060HepG2RPS3A
CNTLNENSG00000044459.10141.88310268.99360-0.922904.152603.18620HepG2SNRNP70
CNTLNENSG00000044459.10133.85320189.61390-0.502402.026101.53940HepG2SRSF9
CNTLNENSG00000044459.10337.83990219.855600.619704.782604.14490HepG2SSB
CNTLNENSG00000044459.1084.48630135.12330-0.677502.651002.09570HepG2TRIM56
CNTLNENSG00000044459.10151.79160258.95710-0.770605.022604.25650HepG2UTP3
CNTLNENSG00000044459.10213.62600153.516000.476602.112701.51380HepG2ZC3H8
CNTLNENSG00000044459.10205.50990294.99140-0.521502.729702.18510HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CNTLN is not available on ENCORE database.






No RBPs affect the alternative splcing events of CNTLN on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CNTLN is not avaliable on ENCORE database.