ZNF33B

General Information

Gene Name : ZNF33B
Gene ID : ENSG00000196693.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZNF33B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZNF33B	ENSG00000196693.14	8.91	8.50	8.71	ENCSR000AEF
HepG2	ZNF33B	ENSG00000196693.14	6.74	12.89	9.82	ENCSR985KAT
K562	ZNF33B	ENSG00000196693.14	10.69	11.37	11.03	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZNF33B is not avaliable on ENCORE database.

Proteins bound to RNA

ZNF33B RNA is bound by 9 proteins.

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eCLIP assay for ZNF33B is not avaliable on ENCORE database.

9 proteins are bound to ZNF33B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	43133779	43133893	-	intron-Distal	4.73236	10.03412	HepG2	EFTUD2
chr10	43127339	43127417	-	CDS,intron-Distal,intron-Proximal	3.36914	9.78963	HepG2	PRPF8
chr10	43088242	43088309	-	CDS,intron-Distal	4.90693	6.37635	HepG2	HNRNPL
chr10	43127372	43127470	-	CDS,intron-Distal,intron-Proximal	3.10395	6.34055	HepG2	PPIG
chr10	43089013	43089066	-	CDS,intron-Distal	4.21565	4.66266	K562	TARDBP
chr10	43088853	43088913	-	CDS,intron-Distal	4.21410	4.24565	HepG2	HNRNPL
chr10	43088920	43088984	-	CDS,intron-Distal	3.98593	3.91772	K562	TARDBP
chr10	43088756	43088802	-	CDS,intron-Distal	3.97870	3.71677	HepG2	HNRNPL
chr10	43088853	43088892	-	CDS,intron-Distal	3.96462	3.49140	K562	RBFOX2
chr10	43086686	43086790	-	3'-UTR,intron-Distal	3.74582	3.46958	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 12 entries

eCLIP assay for ZNF33B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZNF33B is not available on ENCORE database.
135 RBPs can affect the levels of ZNF33B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ZNF33B is not available on ENCORE database.

135 RBPs can affect the gene expression of ZNF33B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZNF33B	ENSG00000272373.1	49.00190	319.97880	-2.70710	37.60890	36.30680	HepG2	SRSF1
ZNF33B	ENSG00000272373.1	52.96230	294.42290	-2.47490	31.93280	30.48120	HepG2	PTBP1
ZNF33B	ENSG00000196693.10	740.73300	1487.02180	-1.00540	27.99360	26.28570	K562	AGGF1
ZNF33B	ENSG00000196693.10	730.85580	1495.15160	-1.03260	24.84010	22.98550	K562	RBM15
ZNF33B	ENSG00000272373.1	85.63800	327.68300	-1.93600	24.06860	22.78790	HepG2	NELFE
ZNF33B	ENSG00000196693.10	682.39580	1547.28420	-1.18110	24.76130	22.43510	K562	AKAP8L
ZNF33B	ENSG00000196693.10	492.53650	1267.12750	-1.36330	23.03870	21.41690	HepG2	DDX3X
ZNF33B	ENSG00000272373.1	90.05580	306.57240	-1.76730	20.39160	19.02930	HepG2	SF3B4
ZNF33B	ENSG00000272373.1	50.20570	303.62190	-2.59640	20.15130	18.54590	HepG2	NCBP2
ZNF33B	ENSG00000272373.1	54.90380	296.61930	-2.43360	19.33700	17.78860	HepG2	MATR3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 209 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZNF33B is not available on ENCORE database.

24 RBPs can affect the splicing of ZNF33B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ZNF33B	ENSG00000196693.10	chr10	-	43109729	43109806			43084554	43090147	43127376	43127472	0.30200	0.00000	0.00039	included	HepG2	AKAP1
MXE	ZNF33B	ENSG00000196693.10	chr10	-	43127742	43127887	43132367	43132420	43127376	43127472	43133921	43133992	0.60900	0.00000	0.00031	1included	K562	FXR2
MXE	ZNF33B	ENSG00000196693.10	chr10	-	43127737	43127887	43132367	43132420	43127376	43127472	43133921	43133992	0.13100	0.00001	0.00402	1included	HepG2	KHSRP
SE	ZNF33B	ENSG00000196693.10	chr10	-	43132367	43132420			43127742	43127887	43133921	43133992	0.12600	0.00003	0.00876	included	HepG2	KHSRP
SE	ZNF33B	ENSG00000196693.10	chr10	-	43109729	43109806			43084554	43090147	43127376	43127472	0.27200	0.00004	0.00352	included	HepG2	PTBP1
SE	ZNF33B	ENSG00000196693.10	chr10	-	43132367	43132420			43127742	43127887	43133921	43133992	0.11600	0.00005	0.01885	included	K562	APOBEC3C
SE	ZNF33B	ENSG00000196693.10	chr10	-	43109729	43109806			43084554	43090147	43127376	43127472	0.22600	0.00007	0.00291	included	HepG2	SRSF1
MXE	ZNF33B	ENSG00000196693.10	chr10	-	43127742	43127887	43132367	43132420	43127376	43127472	43133921	43133992	0.28900	0.00008	0.00749	1included	K562	SAFB
MXE	ZNF33B	ENSG00000196693.10	chr10	-	43127742	43127887	43132367	43132490	43127376	43127472	43133921	43133992	0.56000	0.00010	0.01970	1included	K562	ZNF800
MXE	ZNF33B	ENSG00000196693.10	chr10	-	43127737	43127887	43132367	43132420	43127376	43127472	43133921	43133992	0.18400	0.00012	0.01930	1included	HepG2	ILF3

Showing 1 to 10 of 38 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZNF33B

General Information

Functions

Localization

Domains (AlphaFold: ZNF33B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZNF33B is not avaliable on ENCORE database.

9 proteins are bound to ZNF33B RNA:

eCLIP assay for ZNF33B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZNF33B is not available on ENCORE database.

135 RBPs can affect the gene expression of ZNF33B :

The Knockdown/knockout RNA-Seq assay for ZNF33B is not available on ENCORE database.

24 RBPs can affect the splicing of ZNF33B :

The Knockdown/knockout RNA-Seq assay for ZNF33B is not avaliable on ENCORE database.