TIPIN

General Information

Gene Name : TIPIN
Gene ID : ENSG00000075131.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TIPIN)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TIPIN	ENSG00000075131.9	45.31	36.12	40.72	ENCSR000AEF
HepG2	TIPIN	ENSG00000075131.9	14.41	26.08	20.24	ENCSR985KAT
K562	TIPIN	ENSG00000075131.9	44.84	41.29	43.06	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TIPIN is not avaliable on ENCORE database.

Proteins bound to RNA

TIPIN RNA is bound by 8 proteins.

CanvasJS.com

eCLIP assay for TIPIN is not avaliable on ENCORE database.

8 proteins are bound to TIPIN RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	66639546	66639564	-	intron-Distal	7.54751	400.00000	HepG2	DKC1
chr15	66639539	66639553	-	intron-Distal	5.15792	400.00000	HepG2	SF3A3
chr15	66639546	66639573	-	intron-Distal	5.63149	400.00000	K562	SMNDC1
chr15	66639554	66639577	-	intron-Distal	3.99059	400.00000	HepG2	NOLC1
chr15	66639553	66639572	-	intron-Distal	4.73604	400.00000	HepG2	SF3A3
chr15	66639615	66639620	-	intron-Distal	6.78257	400.00000	HepG2	DKC1
chr15	66639608	66639613	-	intron-Distal	6.48422	400.00000	HepG2	DKC1
chr15	66639564	66639575	-	intron-Distal	7.32520	400.00000	HepG2	DKC1
chr15	66639629	66639647	-	intron-Distal	7.01229	400.00000	HepG2	DKC1
chr15	66639539	66639546	-	intron-Distal	7.84846	400.00000	HepG2	DKC1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 28 entries

eCLIP assay for TIPIN is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TIPIN is not available on ENCORE database.
88 RBPs can affect the levels of TIPIN.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TIPIN is not available on ENCORE database.

88 RBPs can affect the gene expression of TIPIN :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TIPIN	ENSG00000075131.5	620.78830	277.04790	1.16390	18.80080	17.33390	K562	FXR1
TIPIN	ENSG00000075131.5	294.47360	96.84900	1.60420	15.99260	15.05500	HepG2	SRSF1
TIPIN	ENSG00000075131.5	345.22960	105.07640	1.71600	14.44480	13.32770	HepG2	AKAP1
TIPIN	ENSG00000075131.5	65.58820	217.15730	-1.72720	11.80790	10.62290	HepG2	HNRNPLL
TIPIN	ENSG00000075131.5	147.30470	385.62480	-1.38840	12.31500	9.65270	K562	IGF2BP2
TIPIN	ENSG00000075131.5	1139.15830	745.12110	0.61230	10.44300	9.27000	K562	DDX47
TIPIN	ENSG00000075131.5	689.44010	393.84340	0.80770	10.21880	8.99880	K562	PTBP1
TIPIN	ENSG00000075131.5	249.53300	107.55710	1.21400	9.71610	8.70400	HepG2	UTP3
TIPIN	ENSG00000075131.5	120.92710	266.73990	-1.14130	9.39710	8.62380	HepG2	SRFBP1
TIPIN	ENSG00000075131.5	96.36710	235.25740	-1.28760	9.09640	8.10000	HepG2	PUF60
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 107 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TIPIN is not available on ENCORE database.

5 RBPs can affect the splicing of TIPIN :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	TIPIN	ENSG00000075131.5	chr15	-	66641397	66641461			66633487	66633694	66641652	66641775	-0.09100	0.00002	excluded	K562	AQR
A3SS	TIPIN	ENSG00000075131.5	chr15	-	66641652	66641869			66641652	66641775	66643862	66643938	0.08500	0.00000	longer	K562	AQR
MXE	TIPIN	ENSG00000075131.5	chr15	-	66641652	66641775	66644466	66644545	66633487	66633694	66645152	66645293	-0.17100	0.00016	2included	K562	PUS1
MXE	TIPIN	ENSG00000075131.5	chr15	-	66641397	66641461	66641652	66641822	66633487	66633694	66645152	66645293	0.07700	0.00001	1included	K562	AQR
MXE	TIPIN	ENSG00000075131.5	chr15	-	66641397	66641461	66641652	66641869	66633487	66633694	66643862	66643938	0.08400	0.00000	1included	K562	AQR
MXE	TIPIN	ENSG00000075131.5	chr15	-	66641397	66641461	66641652	66641822	66633487	66633694	66643862	66643938	0.07300	0.00001	1included	K562	AQR
MXE	TIPIN	ENSG00000075131.5	chr15	-	66641397	66641461	66641652	66641797	66633487	66633694	66643862	66643938	0.07700	0.00001	1included	K562	AQR
MXE	TIPIN	ENSG00000075131.5	chr15	-	66641652	66641797	66643862	66643938	66633487	66633694	66644466	66644545	-0.15700	0.00000	2included	K562	AQR
MXE	TIPIN	ENSG00000075131.5	chr15	-	66641652	66641822	66644466	66644545	66633487	66633694	66645152	66645293	-0.07000	0.00004	2included	K562	AQR
MXE	TIPIN	ENSG00000075131.5	chr15	-	66641652	66641775	66644466	66644545	66633487	66633694	66645152	66645293	-0.08700	0.00004	2included	K562	AQR

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TIPIN

General Information

Functions

Localization

Domains (AlphaFold: TIPIN)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TIPIN is not avaliable on ENCORE database.

8 proteins are bound to TIPIN RNA:

eCLIP assay for TIPIN is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TIPIN is not available on ENCORE database.

88 RBPs can affect the gene expression of TIPIN :

The Knockdown/knockout RNA-Seq assay for TIPIN is not available on ENCORE database.

5 RBPs can affect the splicing of TIPIN :

The Knockdown/knockout RNA-Seq assay for TIPIN is not avaliable on ENCORE database.