RPLP1

General Information

Gene Name : RPLP1
Gene ID : ENSG00000137818.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RPLP1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RPLP1	ENSG00000137818.11	48.40	417.22	232.81	ENCSR000AEF
HepG2	RPLP1	ENSG00000137818.11	1330.39	268.26	799.33	ENCSR985KAT
K562	RPLP1	ENSG00000137818.11	845.13	423.00	634.07	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RPLP1 is not avaliable on ENCORE database.

Proteins bound to RNA

RPLP1 RNA is bound by 22 proteins.

CanvasJS.com

eCLIP assay for RPLP1 is not avaliable on ENCORE database.

22 proteins are bound to RPLP1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	69745215	69745236	+	5'-UTR	4.10882	400.00000	K562	PABPC4
chr15	69745159	69745196	+	5'-UTR	3.77527	400.00000	K562	PCBP1
chr15	69745161	69745202	+	5'-UTR	3.06026	400.00000	K562	PABPC4
chr15	69745236	69745276	+	5'-UTR	3.82496	400.00000	K562	PABPC4
chr15	69745284	69745294	+	5'-UTR,CDS	3.04015	400.00000	K562	YBX3
chr15	69745202	69745215	+	5'-UTR	3.42031	400.00000	K562	PABPC4
chr15	69746006	69746014	+	CDS,intron-Distal	3.54592	400.00000	K562	YBX3
chr15	69747593	69747598	+	CDS,intron-Distal	3.08172	400.00000	K562	YBX3
chr15	69745297	69745306	+	CDS	3.11937	400.00000	K562	YBX3
chr15	69747538	69747579	+	CDS,intron-Distal	3.14042	400.00000	K562	PABPC4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 104 entries

eCLIP assay for RPLP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RPLP1 is not available on ENCORE database.
118 RBPs can affect the levels of RPLP1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RPLP1 is not available on ENCORE database.

118 RBPs can affect the gene expression of RPLP1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RPLP1	ENSG00000137818.7	5246.90920	20372.70400	-1.95710	84.28030	82.50650	HepG2	SRSF1
RPLP1	ENSG00000137818.7	9083.25860	2685.71870	1.75780	83.87420	81.39380	HepG2	TRIM56
RPLP1	ENSG00000137818.7	4948.17540	2434.13470	1.02340	68.84640	65.89410	HepG2	DNAJC2
RPLP1	ENSG00000137818.7	13167.62450	6456.16850	1.02810	50.34870	47.93610	HepG2	HNRNPL
RPLP1	ENSG00000137818.7	5107.45480	2844.93980	0.84410	46.75820	44.71860	HepG2	SMN1
RPLP1	ENSG00000137818.7	9045.64310	20864.04230	-1.20570	39.84040	38.32330	HepG2	NELFE
RPLP1	ENSG00000137818.7	9606.31200	2439.59810	1.97720	34.65860	32.75570	HepG2	SAFB2
RPLP1	ENSG00000137818.7	8654.54080	18748.14270	-1.11520	34.04680	32.56290	HepG2	PTBP1
RPLP1	ENSG00000137818.7	13434.65140	6433.25260	1.06220	34.03450	32.13390	HepG2	SLBP
RPLP1	ENSG00000137818.7	12849.66870	7122.12430	0.85130	30.22050	28.68650	HepG2	PUM1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 135 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RPLP1 is not available on ENCORE database.

3 RBPs can affect the splicing of RPLP1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	RPLP1	ENSG00000137818.7	chr15	+	69745926	69746060	69745222	69745359	69747508	69747626	-0.05500	0.00000	excluded	K562	AQR
SE	RPLP1	ENSG00000137818.7	chr15	+	69745994	69746060	69745157	69745359	69747508	69747626	-0.05100	0.00001	excluded	HepG2	SF3A3
SE	RPLP1	ENSG00000137818.7	chr15	+	69745994	69746060	69745222	69745359	69747508	69747626	-0.12100	0.00000	excluded	HepG2	SF3B4

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RPLP1

General Information

Functions

Localization

Domains (AlphaFold: RPLP1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RPLP1 is not avaliable on ENCORE database.

22 proteins are bound to RPLP1 RNA:

eCLIP assay for RPLP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RPLP1 is not available on ENCORE database.

118 RBPs can affect the gene expression of RPLP1 :

The Knockdown/knockout RNA-Seq assay for RPLP1 is not available on ENCORE database.

3 RBPs can affect the splicing of RPLP1 :

The Knockdown/knockout RNA-Seq assay for RPLP1 is not avaliable on ENCORE database.