PSRC1

General Information

Gene Name : PSRC1
Gene ID : ENSG00000134222.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PSRC1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PSRC1	ENSG00000134222.16	1.47	2.34	1.90	ENCSR000AEF
HepG2	PSRC1	ENSG00000134222.16	30.79	25.72	28.25	ENCSR985KAT
K562	PSRC1	ENSG00000134222.16	35.94	28.10	32.02	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PSRC1 is not avaliable on ENCORE database.

Proteins bound to RNA

PSRC1 RNA is bound by 21 proteins.

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eCLIP assay for PSRC1 is not avaliable on ENCORE database.

21 proteins are bound to PSRC1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	109822413	109822509	-	3'-UTR,intron-Distal	5.76595	35.65701	K562	UPF1
chr1	109824194	109824201	-	intron-Distal,intron-Proximal	5.41486	32.95702	K562	AQR
chr1	109824231	109824241	-	intron-Distal,intron-Proximal	6.14263	28.79722	K562	AQR
chr1	109825537	109825624	-	5'-UTR,intron-Distal	4.38775	24.34534	K562	AQR
chr1	109823799	109823913	-	CDS,intron-Distal,intron-Proximal	3.37113	19.90595	K562	BUD13
chr1	109822517	109822659	-	3'-UTR,intron-Distal	6.40890	18.11656	K562	UPF1
chr1	109825624	109825692	-	5'-UTR,intron-Distal	5.33156	17.55185	K562	AQR
chr1	109825329	109825429	-	5'-UTR,intron-Distal,intron-Proximal	4.26969	17.37759	K562	AQR
chr1	109825611	109825666	-	5'-UTR,intron-Distal	4.55219	13.91247	HepG2	PRPF8
chr1	109823490	109823567	-	CDS,intron-Distal,intron-Proximal	3.31488	12.23735	K562	ZNF622
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 61 entries

eCLIP assay for PSRC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PSRC1 is not available on ENCORE database.
148 RBPs can affect the levels of PSRC1.

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The Knockdown/knockout RNA-Seq assay for PSRC1 is not available on ENCORE database.

148 RBPs can affect the gene expression of PSRC1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PSRC1	ENSG00000134222.12	4359.90340	1671.26030	1.38330	88.00330	84.96960	K562	AGGF1
PSRC1	ENSG00000134222.12	267.31910	886.13080	-1.72900	48.51300	46.58560	HepG2	ETF1
PSRC1	ENSG00000134222.12	4983.41890	1724.45620	1.53090	48.69320	46.33810	K562	PUS1
PSRC1	ENSG00000134222.12	262.54250	836.52530	-1.67190	45.72380	44.33440	HepG2	SRFBP1
PSRC1	ENSG00000134222.12	203.16310	740.64070	-1.86610	42.53710	40.97570	HepG2	RBM22
PSRC1	ENSG00000134222.12	99.84910	472.00360	-2.24100	35.42480	33.61500	HepG2	RPLP0
PSRC1	ENSG00000134222.12	143.64020	489.04970	-1.76750	29.42050	28.10630	HepG2	TIAL1
PSRC1	ENSG00000134222.12	314.84000	788.41010	-1.32430	29.22950	27.49510	HepG2	SRSF5
PSRC1	ENSG00000134222.12	201.09640	546.41740	-1.44210	28.79980	27.16300	HepG2	CKAP4
PSRC1	ENSG00000134222.12	3181.36660	1680.39260	0.92070	28.88460	26.88810	K562	RBM15
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 185 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PSRC1 is not available on ENCORE database.

18 RBPs can affect the splicing of PSRC1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	PSRC1	ENSG00000134222.12	chr1	-	109825301	109825447			109825301	109825358	109825684	109825790	-0.16000	0.00000	0.00002	shorter	K562	HNRNPUL1
A3SS	PSRC1	ENSG00000134222.12	chr1	-	109825301	109825499			109825301	109825358	109825684	109825790	0.22200	0.00000	0.00005	longer	K562	AQR
RI	PSRC1	ENSG00000134222.12	chr1	-	109825139	109825353			109825139	109825197	109825301	109825353	0.07100	0.00000	0.00000	included	K562	PUS1
RI	PSRC1	ENSG00000134222.12	chr1	-	109823398	109823873			109823398	109823668	109823758	109823873	0.25100	0.00000	0.00000	included	K562	PUS1
RI	PSRC1	ENSG00000134222.12	chr1	-	109823398	109823873			109823398	109823668	109823758	109823873	0.17100	0.00000	0.00000	included	K562	AKAP8L
RI	PSRC1	ENSG00000134222.12	chr1	-	109823398	109823873			109823398	109823668	109823758	109823873	0.14600	0.00000	0.00008	included	K562	RBM15
RI	PSRC1	ENSG00000134222.12	chr1	-	109825139	109825353			109825139	109825197	109825301	109825353	0.05700	0.00000	0.00000	included	K562	UTP18
MXE	PSRC1	ENSG00000134222.12	chr1	-	109823758	109823873	109824240	109824682	109823398	109823668	109825139	109825197	-0.21200	0.00000	0.00017	2included	K562	XRN2
MXE	PSRC1	ENSG00000134222.12	chr1	-	109824240	109824682	109825301	109825353	109823398	109823668	109825684	109825769	-0.08500	0.00000	0.00000	2included	K562	HNRNPUL1
RI	PSRC1	ENSG00000134222.12	chr1	-	109823398	109823873			109823398	109823668	109823758	109823873	0.12800	0.00001	0.00014	included	K562	AGGF1

Showing 1 to 10 of 36 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PSRC1

General Information

Functions

Localization

Domains (AlphaFold: PSRC1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PSRC1 is not avaliable on ENCORE database.

21 proteins are bound to PSRC1 RNA:

eCLIP assay for PSRC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PSRC1 is not available on ENCORE database.

148 RBPs can affect the gene expression of PSRC1 :

The Knockdown/knockout RNA-Seq assay for PSRC1 is not available on ENCORE database.

18 RBPs can affect the splicing of PSRC1 :

The Knockdown/knockout RNA-Seq assay for PSRC1 is not avaliable on ENCORE database.