PLA2G6

General Information

Gene Name : PLA2G6
Gene ID : ENSG00000184381.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PLA2G6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PLA2G6	ENSG00000184381.18	8.94	12.87	10.90	ENCSR000AEF
HepG2	PLA2G6	ENSG00000184381.18	7.89	7.02	7.46	ENCSR985KAT
K562	PLA2G6	ENSG00000184381.18	5.69	6.51	6.10	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PLA2G6 is not avaliable on ENCORE database.

Proteins bound to RNA

PLA2G6 RNA is bound by 10 proteins.

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eCLIP assay for PLA2G6 is not avaliable on ENCORE database.

10 proteins are bound to PLA2G6 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	38521132	38521182	-	intron-Distal	5.07629	29.22419	K562	AGGF1
chr22	38521018	38521132	-	intron-Distal	6.05357	27.40181	K562	AGGF1
chr22	38525417	38525455	-	intron-Distal,intron-Proximal	5.93098	24.46729	K562	AQR
chr22	38521182	38521263	-	intron-Distal	4.75902	20.25903	K562	AGGF1
chr22	38525455	38525460	-	intron-Distal,intron-Proximal	6.40856	17.35737	K562	AQR
chr22	38525356	38525417	-	intron-Distal,intron-Proximal	5.02380	17.02742	K562	AQR
chr22	38524414	38524475	-	CDS,intron-Distal,intron-Proximal	5.26838	15.34985	K562	AQR
chr22	38521263	38521320	-	intron-Distal	4.27567	10.70188	K562	AGGF1
chr22	38522459	38522515	-	intron-Distal,intron-Proximal	4.54163	7.82456	K562	SF3B4
chr22	38522414	38522555	-	CDS,intron-Distal,intron-Proximal	3.59065	6.38100	K562	BUD13
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 23 entries

eCLIP assay for PLA2G6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PLA2G6 is not available on ENCORE database.
100 RBPs can affect the levels of PLA2G6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PLA2G6 is not available on ENCORE database.

100 RBPs can affect the gene expression of PLA2G6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PLA2G6	ENSG00000184381.14	82.62140	454.38920	-2.45930	37.00400	34.88690	K562	DDX47
PLA2G6	ENSG00000184381.14	946.51010	394.82520	1.26130	33.52110	31.00030	K562	SRPK2
PLA2G6	ENSG00000184381.14	510.04560	127.39860	2.00120	28.42640	26.43330	HepG2	HNRNPK
PLA2G6	ENSG00000184381.14	68.03900	256.82780	-1.91640	20.37250	18.84200	K562	FXR1
PLA2G6	ENSG00000184381.14	406.08960	125.66840	1.69210	18.52430	16.87930	HepG2	G3BP1
PLA2G6	ENSG00000184381.14	293.63930	637.44330	-1.11830	16.90190	14.61080	K562	PUM2
PLA2G6	ENSG00000184381.14	35.58170	217.98650	-2.61500	16.99060	14.59990	K562	EIF3A
PLA2G6	ENSG00000184381.14	376.69390	148.38410	1.34400	14.36820	13.10090	HepG2	QKI
PLA2G6	ENSG00000184381.14	320.47550	650.76820	-1.02190	15.10260	12.56860	K562	PUM1
PLA2G6	ENSG00000184381.14	164.27580	385.37130	-1.23010	14.23470	12.50070	K562	SF3A3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 115 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PLA2G6 is not available on ENCORE database.

3 RBPs can affect the splicing of PLA2G6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	PLA2G6	ENSG00000184381.14	chr22	-	38511533	38511856	38511533	38511688	38512081	38512218	-0.54400	0.00000	0.00000	shorter	HepG2	U2AF2
SE	PLA2G6	ENSG00000184381.14	chr22	-	38540902	38540985	38539243	38539295	38541444	38541660	-0.56700	0.00036	0.05949	excluded	K562	NSUN2
SE	PLA2G6	ENSG00000184381.14	chr22	-	38523413	38523465	38522377	38522456	38524275	38524437	0.80400	0.00180	0.08081	included	HepG2	PTBP1

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PLA2G6

General Information

Functions

Localization

Domains (AlphaFold: PLA2G6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PLA2G6 is not avaliable on ENCORE database.

10 proteins are bound to PLA2G6 RNA:

eCLIP assay for PLA2G6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PLA2G6 is not available on ENCORE database.

100 RBPs can affect the gene expression of PLA2G6 :

The Knockdown/knockout RNA-Seq assay for PLA2G6 is not available on ENCORE database.

3 RBPs can affect the splicing of PLA2G6 :

The Knockdown/knockout RNA-Seq assay for PLA2G6 is not avaliable on ENCORE database.