PIAS4

General Information

Gene Name : PIAS4
Gene ID : ENSG00000105229.6
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PIAS4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PIAS4	ENSG00000105229.6	3.40	6.56	4.98	ENCSR000AEF
HepG2	PIAS4	ENSG00000105229.6	19.55	9.00	14.28	ENCSR985KAT
K562	PIAS4	ENSG00000105229.6	16.80	9.72	13.26	ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	PIAS4-BGRSLV06-RS293		PIAS4	Ribo-STAMP-293T	Released			shRNA	KD% = ,

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
PIAS4	Ribo-STAMP-293T	shRNA			PIAS4-BGRSLV06-15,PIAS4-BGRSLV06-16	NT-BGRSLV06-1,NT-BGRSLV06-2	,	Released	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PIAS4 is not avaliable on ENCORE database.

Proteins bound to RNA

PIAS4 RNA is bound by 51 proteins.

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eCLIP assay for PIAS4 is not avaliable on ENCORE database.

51 proteins are bound to PIAS4 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	4037313	4037376	+	CDS,intron-Proximal	6.37293	400.00000	K562	DHX30
chr19	4036920	4036934	+	intron-Distal	7.31097	400.00000	K562	AGGF1
chr19	4036031	4036064	+	intron-Distal	7.56979	400.00000	K562	AGGF1
chr19	4035706	4035776	+	intron-Distal	8.14709	400.00000	K562	AGGF1
chr19	4036942	4036987	+	intron-Distal	7.48699	400.00000	K562	AGGF1
chr19	4036793	4036800	+	intron-Distal	6.74914	400.00000	K562	AGGF1
chr19	4036909	4036920	+	intron-Distal	7.27225	400.00000	K562	AGGF1
chr19	4036861	4036893	+	intron-Distal	6.87048	400.00000	K562	AGGF1
chr19	4036934	4036942	+	intron-Distal	7.22464	400.00000	K562	AGGF1
chr19	4036825	4036861	+	intron-Distal	6.79327	400.00000	K562	AGGF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 460 entries

eCLIP assay for PIAS4 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for PIAS4 is not available on ENCORE database.
85 RBPs can affect the levels of PIAS4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PIAS4 is not available on ENCORE database.

85 RBPs can affect the gene expression of PIAS4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PIAS4	ENSG00000105229.2	146.90110	373.07980	-1.34460	15.72220	14.54800	HepG2	TAF15
PIAS4	ENSG00000105229.2	474.43240	223.45400	1.08610	12.24610	10.75410	K562	SRSF1
PIAS4	ENSG00000105229.2	433.56900	227.91470	0.92770	9.74860	8.55710	K562	PTBP1
PIAS4	ENSG00000105229.2	415.91800	218.11450	0.93110	8.88230	7.29950	K562	TIA1
PIAS4	ENSG00000105229.2	391.92000	227.85630	0.78230	8.00060	7.12040	HepG2	TRIM56
PIAS4	ENSG00000105229.2	850.44900	555.35100	0.61470	7.71070	6.75150	K562	RBM15
PIAS4	ENSG00000105229.2	822.20270	552.33270	0.57390	7.50330	6.63400	K562	AGGF1
PIAS4	ENSG00000105229.2	467.36810	226.10340	1.04750	7.75100	6.49430	K562	TARDBP
PIAS4	ENSG00000105229.2	411.17860	234.57080	0.80960	7.09590	5.72340	K562	MAGOH
PIAS4	ENSG00000105229.2	529.76540	304.43530	0.79910	7.40400	5.69160	K562	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 93 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PIAS4

General Information

Functions

Localization

Domains (AlphaFold: PIAS4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PIAS4 is not avaliable on ENCORE database.

51 proteins are bound to PIAS4 RNA:

eCLIP assay for PIAS4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PIAS4 is not available on ENCORE database.

85 RBPs can affect the gene expression of PIAS4 :

The Knockdown/knockout RNA-Seq assay for PIAS4 is not available on ENCORE database.

No RBPs affect the alternative splcing events of PIAS4 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for PIAS4 is not avaliable on ENCORE database.