NDUFS8

General Information

Gene Name : NDUFS8
Gene ID : ENSG00000110717.12
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NDUFS8)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NDUFS8	ENSG00000110717.12	8.27	30.24	19.25	ENCSR000AEF
HepG2	NDUFS8	ENSG00000110717.12	126.93	41.67	84.30	ENCSR985KAT
K562	NDUFS8	ENSG00000110717.12	112.93	67.85	90.39	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NDUFS8 is not avaliable on ENCORE database.

Proteins bound to RNA

NDUFS8 RNA is bound by 16 proteins.

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eCLIP assay for NDUFS8 is not avaliable on ENCORE database.

16 proteins are bound to NDUFS8 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	67799751	67799804	+	CDS,intron-Distal,intron-Proximal	4.22697	41.81335	K562	DDX3X
chr11	67800642	67800704	+	3'-UTR,5'-UTR,CDS,intron-Distal	5.89131	40.88975	K562	RPS3
chr11	67799617	67799665	+	CDS,intron-Distal,intron-Proximal	4.51444	37.71458	K562	DDX3X
chr11	67799633	67799678	+	CDS,intron-Distal,intron-Proximal	4.95284	27.82458	HepG2	DDX3X
chr11	67799665	67799677	+	CDS,intron-Distal,intron-Proximal	4.16007	26.39992	K562	DDX3X
chr11	67800623	67800730	+	3'-UTR,5'-UTR,CDS,intron-Distal	5.08193	20.86616	K562	PABPC4
chr11	67803743	67803776	+	3'-UTR,CDS	4.66499	20.22465	K562	YBX3
chr11	67803776	67803848	+	3'-UTR,CDS	3.28638	19.59054	K562	YBX3
chr11	67803722	67803743	+	3'-UTR,CDS	4.04480	15.52381	K562	YBX3
chr11	67800620	67800674	+	3'-UTR,5'-UTR,CDS,intron-Distal	3.42414	14.58137	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 55 entries

eCLIP assay for NDUFS8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NDUFS8 is not available on ENCORE database.
110 RBPs can affect the levels of NDUFS8.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NDUFS8 is not available on ENCORE database.

110 RBPs can affect the gene expression of NDUFS8 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NDUFS8	ENSG00000110717.6	1004.72290	421.62700	1.25270	20.88130	19.44650	HepG2	PUF60
NDUFS8	ENSG00000110717.6	406.97070	176.57730	1.20450	17.62880	16.11830	HepG2	DNAJC2
NDUFS8	ENSG00000110717.6	713.55710	273.30320	1.38440	17.67500	15.77910	HepG2	RPS2
NDUFS8	ENSG00000110717.6	734.51600	404.30320	0.86130	15.69090	14.26940	HepG2	SLBP
NDUFS8	ENSG00000110717.6	768.52330	416.31200	0.88430	15.43730	14.12560	HepG2	SRSF5
NDUFS8	ENSG00000110717.6	43.74270	197.21820	-2.17270	15.53090	13.54010	K562	G3BP2
NDUFS8	ENSG00000110717.6	935.87490	450.68020	1.05410	15.16340	13.25020	K562	TARDBP
NDUFS8	ENSG00000110717.6	618.97730	194.85350	1.66740	12.41710	11.34690	HepG2	TRIM56
NDUFS8	ENSG00000110717.6	906.39960	420.76700	1.10700	13.76740	11.26300	K562	SRSF5
NDUFS8	ENSG00000110717.6	689.52250	296.38390	1.21800	12.72180	10.58550	HepG2	RBM27
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 122 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NDUFS8 is not available on ENCORE database.

29 RBPs can affect the splicing of NDUFS8 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
A5SS	NDUFS8	ENSG00000110717.6	chr11	+	67799752	67799990			67799752	67799803	67800389	67800479	0.05500	0.00000	longer	K562	AQR
A5SS	NDUFS8	ENSG00000110717.6	chr11	+	67799752	67799990			67799752	67799803	67800389	67800479	0.12700	0.00001	longer	HepG2	PRPF8
A5SS	NDUFS8	ENSG00000110717.6	chr11	+	67799752	67799990			67799752	67799803	67800389	67800479	0.29100	0.00000	longer	HepG2	FTO
MXE	NDUFS8	ENSG00000110717.6	chr11	+	67799618	67799676	67799752	67799803	67798083	67798200	67800389	67800479	0.32600	0.00011	1included	K562	PTBP1
MXE	NDUFS8	ENSG00000110717.6	chr11	+	67799618	67799676	67799752	67799803	67798083	67798200	67800389	67800479	0.51700	0.00000	1included	K562	UCHL5
MXE	NDUFS8	ENSG00000110717.6	chr11	+	67799618	67799676	67799752	67799803	67798083	67798200	67800389	67800479	0.33300	0.00010	1included	K562	SRSF1
MXE	NDUFS8	ENSG00000110717.6	chr11	+	67799618	67799676	67799752	67799803	67798083	67798200	67800389	67800479	0.38700	0.00000	1included	K562	NONO
MXE	NDUFS8	ENSG00000110717.6	chr11	+	67799618	67799676	67800389	67800479	67798083	67798200	67800577	67801197	0.28500	0.00000	1included	K562	NONO
MXE	NDUFS8	ENSG00000110717.6	chr11	+	67799618	67799676	67799752	67799803	67798083	67798200	67800389	67800479	0.33800	0.00003	1included	K562	TARDBP
MXE	NDUFS8	ENSG00000110717.6	chr11	+	67799618	67799676	67799752	67799990	67798150	67798200	67800389	67800479	0.13400	0.00004	1included	K562	TARDBP

Showing 1 to 10 of 53 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NDUFS8

General Information

Functions

Localization

Domains (AlphaFold: NDUFS8)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NDUFS8 is not avaliable on ENCORE database.

16 proteins are bound to NDUFS8 RNA:

eCLIP assay for NDUFS8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NDUFS8 is not available on ENCORE database.

110 RBPs can affect the gene expression of NDUFS8 :

The Knockdown/knockout RNA-Seq assay for NDUFS8 is not available on ENCORE database.

29 RBPs can affect the splicing of NDUFS8 :

The Knockdown/knockout RNA-Seq assay for NDUFS8 is not avaliable on ENCORE database.