GOLPH3

General Information

Gene Name : GOLPH3
Gene ID : ENSG00000113384.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GOLPH3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GOLPH3	ENSG00000113384.13	44.47	37.04	40.75	ENCSR000AEF
HepG2	GOLPH3	ENSG00000113384.13	53.48	82.52	68.00	ENCSR985KAT
K562	GOLPH3	ENSG00000113384.13	48.00	49.27	48.64	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GOLPH3 is not avaliable on ENCORE database.

Proteins bound to RNA

GOLPH3 RNA is bound by 33 proteins.

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eCLIP assay for GOLPH3 is not avaliable on ENCORE database.

33 proteins are bound to GOLPH3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr5	32125966	32126038	-	3'-UTR,intron-Distal	5.11863	34.81967	K562	IGF2BP1
chr5	32125591	32125647	-	3'-UTR,intron-Distal	3.26059	31.21847	K562	PUM2
chr5	32126371	32126418	-	CDS,intron-Distal,intron-Proximal	5.59572	27.51716	K562	LIN28B
chr5	32126418	32126445	-	CDS,intron-Distal,intron-Proximal	5.47486	24.56005	K562	LIN28B
chr5	32126038	32126061	-	3'-UTR,intron-Distal	4.57098	24.01162	K562	IGF2BP1
chr5	32174125	32174203	-	5'-UTR,CDS,intron-Distal	4.28988	22.93371	HepG2	DDX3X
chr5	32125658	32125735	-	3'-UTR,intron-Distal	3.43354	21.64917	K562	PUM2
chr5	32125672	32125729	-	3'-UTR,intron-Distal	4.82837	18.20263	K562	FAM120A
chr5	32143620	32143718	-	intron-Distal	5.14816	17.78315	K562	CSTF2T
chr5	32126192	32126231	-	3'-UTR,intron-Distal	4.04614	17.28617	K562	PUM2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 83 entries

eCLIP assay for GOLPH3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GOLPH3 is not available on ENCORE database.
75 RBPs can affect the levels of GOLPH3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GOLPH3 is not available on ENCORE database.

75 RBPs can affect the gene expression of GOLPH3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GOLPH3	ENSG00000113384.9	1154.29130	2481.48870	-1.10420	33.00470	31.62290	HepG2	TIAL1
GOLPH3	ENSG00000113384.9	1512.22950	2995.91260	-0.98630	16.37770	14.67500	HepG2	PABPC4
GOLPH3	ENSG00000113384.9	1682.19190	2553.76890	-0.60230	15.85410	14.49930	HepG2	HNRNPU
GOLPH3	ENSG00000113384.9	1680.41020	2503.64450	-0.57520	14.48260	13.33510	HepG2	TRIM56
GOLPH3	ENSG00000113384.9	2859.37330	3870.66240	-0.43690	12.72670	11.55660	HepG2	SUCLG1
GOLPH3	ENSG00000113384.9	1600.06660	2274.24810	-0.50730	12.32200	11.10970	HepG2	SAFB2
GOLPH3	ENSG00000113384.9	2352.01220	3441.81470	-0.54930	11.78730	10.87170	HepG2	RBM22
GOLPH3	ENSG00000113384.9	2474.81030	3317.47790	-0.42280	12.03430	10.71920	HepG2	HNRNPL
GOLPH3	ENSG00000113384.9	2061.72250	2782.43340	-0.43250	11.59910	10.66930	HepG2	ZNF622
GOLPH3	ENSG00000113384.9	1907.75250	2608.59160	-0.45140	11.69890	10.30960	HepG2	ILF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 82 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GOLPH3 is not available on ENCORE database.

2 RBPs can affect the splicing of GOLPH3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	GOLPH3	ENSG00000113384.9	chr5	-	32170722	32170874	32143937	32143986	32173915	32174456	0.08600	0.00000	included	K562	AQR
SE	GOLPH3	ENSG00000113384.9	chr5	-	32170722	32170874	32143854	32143986	32173915	32174456	0.14900	0.00016	included	K562	HNRNPC
A3SS	GOLPH3	ENSG00000113384.9	chr5	-	32143854	32144021	32143854	32143986	32173915	32174456	0.06900	0.00001	longer	K562	AQR

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GOLPH3

General Information

Functions

Localization

Domains (AlphaFold: GOLPH3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GOLPH3 is not avaliable on ENCORE database.

33 proteins are bound to GOLPH3 RNA:

eCLIP assay for GOLPH3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GOLPH3 is not available on ENCORE database.

75 RBPs can affect the gene expression of GOLPH3 :

The Knockdown/knockout RNA-Seq assay for GOLPH3 is not available on ENCORE database.

2 RBPs can affect the splicing of GOLPH3 :

The Knockdown/knockout RNA-Seq assay for GOLPH3 is not avaliable on ENCORE database.