HNRNPR

General Information

Gene Name : HNRNPR
Gene ID : ENSG00000125944.19
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: HNRNPR)

Not Available

Antibody Validation

View validation images for all HNRNPR antibodies

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HNRNPR	ENSG00000125944.19	203.28	190.66	196.97	ENCSR000AEF
HepG2	HNRNPR	ENSG00000125944.19	147.89	221.49	184.69	ENCSR985KAT
K562	HNRNPR	ENSG00000125944.19	229.95	250.06	240.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
HNRNPR	ENCAB251QMY	GTX106526	40807		Released, ENCODE3	Released, ENCODE3
HNRNPR		8588S	1		Released, ENCODE3	Submitted, ENCORE2

KD RNA-Seq

GeneName	Cell_Line	Method	Sample_reps	Control_reps	KD%	Status	Project
HNRNPR	K562	CRISPR	BGKcLV42-41,BGKcLV42-42	BGKcLV42-1,BGKcLV42-2	0.0,0.0	NotSatisfied	ENCORE2
HNRNPR	K562	CRISPR	BGKcLV44-31,BGKcLV44-32	BGKcLV44-1,BGKcLV44-2		NotSatisfied	ENCORE2
HNRNPR	HepG2	CRISPR	BGHcLV45-41,BGHcLV45-42	BGHcLV45-1,BGHcLV45-2	0.0,0.0	NotSatisfied	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
HNRNPR	Product_ID: GTX106526 Lot_ID: 40807 Source: GeneTex Target Name: HNRNPR-human
HNRNPR	Product_ID: 8588S Lot_ID: 1 Source: Cell Signaling Technology Target Name: HNRNPR-human

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HNRNPR is not avaliable on ENCORE database.

Proteins bound to RNA

HNRNPR RNA is bound by 39 proteins.

CanvasJS.com

eCLIP assay for HNRNPR is not avaliable on ENCORE database.

39 proteins are bound to HNRNPR RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	23636519	23636566	-	3'-UTR,intron-Distal	3.71352	73.34945	K562	PUM2
chr1	23637053	23637228	-	CDS,intron-Distal	4.09308	68.20564	K562	UCHL5
chr1	23631104	23631176	-	intron-Distal,intron-Proximal	6.91003	55.99885	K562	FMR1
chr1	23636566	23636616	-	3'-UTR,intron-Distal,intron-Proximal	3.19286	53.54112	K562	PUM2
chr1	23637721	23637788	-	CDS,intron-Distal	3.29824	50.72262	K562	UCHL5
chr1	23644974	23645045	-	CDS,intron-Distal,intron-Proximal	3.48313	40.33553	K562	UCHL5
chr1	23637712	23637780	-	CDS,intron-Distal	4.07665	38.20223	HepG2	BCLAF1
chr1	23637693	23637721	-	CDS,intron-Distal,intron-Proximal	3.86343	37.49254	K562	UCHL5
chr1	23644976	23645055	-	CDS,intron-Distal	3.92591	37.35917	K562	ZNF622
chr1	23637301	23637347	-	CDS,intron-Distal	5.18800	35.60455	K562	UCHL5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 198 entries

eCLIP assay for HNRNPR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for HNRNPR is not available on ENCORE database.
123 RBPs can affect the levels of HNRNPR.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for HNRNPR is not available on ENCORE database.

123 RBPs can affect the gene expression of HNRNPR :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HNRNPR	ENSG00000125944.14	3390.82430	10356.42150	-1.61080	63.02680	60.97470	HepG2	BOP1
HNRNPR	ENSG00000125944.14	2013.26040	4546.93060	-1.17540	43.53380	41.99350	HepG2	TIAL1
HNRNPR	ENSG00000125944.14	3788.10850	10285.70340	-1.44110	43.37390	41.35910	HepG2	HNRNPLL
HNRNPR	ENSG00000125944.14	7639.88830	4455.04740	0.77800	39.95090	38.61310	HepG2	SRSF1
HNRNPR	ENSG00000125944.14	2558.80530	4587.54090	-0.84230	36.44350	34.68900	HepG2	TRIM56
HNRNPR	ENSG00000125944.14	2323.09050	4194.70790	-0.85250	28.97040	26.97500	HepG2	DNAJC21
HNRNPR	ENSG00000125944.14	4570.05140	7351.07170	-0.68570	26.82490	25.08390	HepG2	AUH
HNRNPR	ENSG00000125944.14	5286.83120	8440.11890	-0.67490	25.86470	24.34290	HepG2	ETF1
HNRNPR	ENSG00000125944.14	21425.63040	10652.63440	1.00800	25.34210	23.70660	K562	PUS1
HNRNPR	ENSG00000125944.14	4686.69070	9507.83570	-1.02050	24.33290	22.54760	HepG2	CPSF6
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 143 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HNRNPR is not available on ENCORE database.

39 RBPs can affect the splicing of HNRNPR :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	HNRNPR	ENSG00000125944.14	chr1	-	23667344	23667510	23664982	23665101	23670703	23670803	0.18700	0.00032	included	K562	TAF15
SE	HNRNPR	ENSG00000125944.14	chr1	-	23650048	23650225	23648020	23648156	23660010	23660124	-0.15200	0.00000	excluded	K562	SRSF1
SE	HNRNPR	ENSG00000125944.14	chr1	-	23660010	23660124	23650048	23650225	23664246	23664354	-0.16600	0.00000	excluded	K562	SF3B4
SE	HNRNPR	ENSG00000125944.14	chr1	-	23667344	23667510	23664982	23665101	23670703	23670803	-0.16400	0.00000	excluded	K562	PRPF8
SE	HNRNPR	ENSG00000125944.14	chr1	-	23660010	23660124	23650048	23650225	23664246	23664354	-0.10200	0.00000	excluded	K562	AKAP8L
SE	HNRNPR	ENSG00000125944.14	chr1	-	23667344	23667510	23664982	23665101	23670703	23670803	0.19500	0.00064	included	HepG2	HNRNPM
SE	HNRNPR	ENSG00000125944.14	chr1	-	23667344	23667510	23664982	23665101	23670703	23670803	-0.21000	0.00003	excluded	HepG2	U2AF2
SE	HNRNPR	ENSG00000125944.14	chr1	-	23640045	23640229	23637693	23637815	23644975	23645181	-0.05800	0.00000	excluded	K562	AQR
SE	HNRNPR	ENSG00000125944.14	chr1	-	23660010	23660124	23650048	23650225	23664246	23664354	-0.11700	0.00000	excluded	K562	AQR
SE	HNRNPR	ENSG00000125944.14	chr1	-	23660010	23660124	23650048	23650225	23664246	23664354	-0.18600	0.00000	excluded	K562	PUS1

Showing 1 to 10 of 123 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HNRNPR

General Information

Functions

Localization

Domains (AlphaFold: HNRNPR)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HNRNPR is not avaliable on ENCORE database.

39 proteins are bound to HNRNPR RNA:

eCLIP assay for HNRNPR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HNRNPR is not available on ENCORE database.

123 RBPs can affect the gene expression of HNRNPR :

The Knockdown/knockout RNA-Seq assay for HNRNPR is not available on ENCORE database.

39 RBPs can affect the splicing of HNRNPR :

The Knockdown/knockout RNA-Seq assay for HNRNPR is not avaliable on ENCORE database.