CDK1

General Information

Gene Name : CDK1
Gene ID : ENSG00000170312.15
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CDK1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CDK1	ENSG00000170312.15	94.95	86.44	90.69	ENCSR000AEF
HepG2	CDK1	ENSG00000170312.15	48.50	124.06	86.28	ENCSR985KAT
K562	CDK1	ENSG00000170312.15	148.94	153.58	151.26	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CDK1 is not avaliable on ENCORE database.

Proteins bound to RNA

CDK1 RNA is bound by 34 proteins.

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eCLIP assay for CDK1 is not avaliable on ENCORE database.

34 proteins are bound to CDK1 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	62553912	62553963	+	3'-UTR	4.44858	76.33418	K562	PUM2
chr10	62538281	62538329	+	5'-UTR,intron-Distal,intron-Proximal	3.71620	48.24831	K562	DDX3X
chr10	62553823	62553879	+	3'-UTR	3.15515	41.04878	K562	PUM2
chr10	62538337	62538372	+	5'-UTR,intron-Distal,intron-Proximal	4.97164	34.37523	K562	AQR
chr10	62538327	62538337	+	5'-UTR,intron-Distal,intron-Proximal	4.61012	31.35304	K562	AQR
chr10	62539897	62539945	+	5'-UTR,CDS,intron-Proximal	3.58273	30.26880	K562	DDX3X
chr10	62546042	62546083	+	intron-Distal	5.66246	28.72980	K562	KHSRP
chr10	62547257	62547293	+	intron-Distal	5.69120	26.81977	K562	TIA1
chr10	62545572	62545647	+	intron-Distal,intron-Proximal	3.45608	26.16541	K562	KHSRP
chr10	62547293	62547323	+	intron-Distal	5.62665	25.46449	K562	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 120 entries

eCLIP assay for CDK1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CDK1 is not available on ENCORE database.
177 RBPs can affect the levels of CDK1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CDK1 is not available on ENCORE database.

177 RBPs can affect the gene expression of CDK1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CDK1	ENSG00000170312.11	65.93470	1026.53180	-3.96060	193.80730	191.31370	HepG2	ZNF622
CDK1	ENSG00000170312.11	178.38890	1570.47330	-3.13810	146.72420	144.10980	HepG2	TIAL1
CDK1	ENSG00000170312.11	24.72110	768.18490	-4.95760	124.02240	121.47620	HepG2	BOP1
CDK1	ENSG00000170312.11	128.50280	1631.49360	-3.66630	123.13220	119.87330	HepG2	SUPV3L1
CDK1	ENSG00000170312.11	125.92010	1199.46010	-3.25180	107.73040	105.08000	HepG2	RPLP0
CDK1	ENSG00000170312.11	167.62970	933.37190	-2.47720	91.39330	88.68000	HepG2	UPF1
CDK1	ENSG00000170312.11	120.15570	1084.88880	-3.17460	88.64600	86.07310	HepG2	RPS19
CDK1	ENSG00000170312.11	472.39900	1584.37950	-1.74580	80.89760	78.46460	HepG2	TRIM56
CDK1	ENSG00000170312.11	11384.89860	5233.17670	1.12130	78.44360	75.51050	K562	AGGF1
CDK1	ENSG00000170312.11	18964.48130	5400.06910	1.81220	75.05270	72.14370	K562	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 222 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CDK1 is not available on ENCORE database.

10 RBPs can affect the splicing of CDK1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CDK1	ENSG00000170312.11	chr10	+	62539898	62539960			62538211	62538328	62544462	62544619	-0.14700	0.00000	0.00000	excluded	K562	SF3B4
SE	CDK1	ENSG00000170312.11	chr10	+	62547790	62547988			62545421	62545545	62551647	62551811	-0.07200	0.00000	0.00000	excluded	K562	AQR
SE	CDK1	ENSG00000170312.11	chr10	+	62539898	62539960			62538211	62538328	62544462	62544619	-0.08300	0.00000	0.00000	excluded	K562	AQR
SE	CDK1	ENSG00000170312.11	chr10	+	62539898	62539960			62538211	62538328	62544462	62544619	-0.07500	0.00000	0.00000	excluded	K562	PUS1
SE	CDK1	ENSG00000170312.11	chr10	+	62539898	62539960			62538211	62538328	62544462	62544619	-0.06500	0.00000	0.00000	excluded	K562	RBM15
SE	CDK1	ENSG00000170312.11	chr10	+	62539898	62539960			62538211	62538328	62544462	62544619	-0.05100	0.00000	0.00000	excluded	K562	AGGF1
MXE	CDK1	ENSG00000170312.11	chr10	+	62539898	62539960	62544462	62544619	62538211	62538328	62545421	62545545	-0.14200	0.00000	0.00006	2included	K562	AQR
MXE	CDK1	ENSG00000170312.11	chr10	+	62539898	62539960	62544440	62544619	62538211	62538328	62545421	62546827	-0.12200	0.00013	0.00150	2included	K562	AQR
MXE	CDK1	ENSG00000170312.11	chr10	+	62539898	62539960	62544403	62544619	62538211	62538328	62545421	62546827	-0.12200	0.00015	0.00168	2included	K562	AQR
SE	CDK1	ENSG00000170312.11	chr10	+	62547864	62547988			62545421	62545545	62551647	62551811	-0.07300	0.00027	0.03898	excluded	HepG2	SSB

Showing 1 to 10 of 18 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CDK1

General Information

Functions

Localization

Domains (AlphaFold: CDK1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CDK1 is not avaliable on ENCORE database.

34 proteins are bound to CDK1 RNA:

eCLIP assay for CDK1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CDK1 is not available on ENCORE database.

177 RBPs can affect the gene expression of CDK1 :

The Knockdown/knockout RNA-Seq assay for CDK1 is not available on ENCORE database.

10 RBPs can affect the splicing of CDK1 :

The Knockdown/knockout RNA-Seq assay for CDK1 is not avaliable on ENCORE database.