ZGPAT

General Information

Gene Name : ZGPAT
Gene ID : ENSG00000197114.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZGPAT)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZGPAT	ENSG00000197114.11	0.84	3.33	2.08	ENCSR000AEF
HepG2	ZGPAT	ENSG00000197114.11	36.36	6.67	21.52	ENCSR985KAT
K562	ZGPAT	ENSG00000197114.11	7.91	3.75	5.83	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZGPAT is not avaliable on ENCORE database.

Proteins bound to RNA

ZGPAT RNA is bound by 40 proteins.

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eCLIP assay for ZGPAT is not avaliable on ENCORE database.

40 proteins are bound to ZGPAT RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	62363691	62363845	+	intron-Distal	5.66091	75.61343	HepG2	DKC1
chr20	62364423	62364619	+	CDS,intron-Distal,intron-Proximal	8.22070	54.66930	K562	EIF4G2
chr20	62363698	62363821	+	intron-Distal	7.58706	54.08012	K562	EIF4G2
chr20	62365698	62365821	+	intron-Distal	5.12140	34.00346	HepG2	RBFOX2
chr20	62363531	62363619	+	intron-Distal	7.48711	31.45845	K562	EIF4G2
chr20	62362789	62362898	+	intron-Distal	6.64690	29.56324	K562	TARDBP
chr20	62363821	62363910	+	intron-Distal	7.50356	27.43779	K562	EIF4G2
chr20	62365569	62365632	+	intron-Distal	4.92175	25.11633	HepG2	RBFOX2
chr20	62363623	62363691	+	intron-Distal	5.68514	24.98496	HepG2	DKC1
chr20	62365948	62366108	+	CDS,intron-Distal,intron-Proximal	5.47536	24.20180	HepG2	SF3B4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 143 entries

eCLIP assay for ZGPAT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZGPAT is not available on ENCORE database.
84 RBPs can affect the levels of ZGPAT.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ZGPAT is not available on ENCORE database.

84 RBPs can affect the gene expression of ZGPAT :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZGPAT	ENSG00000197114.7	897.18600	460.44050	0.96230	20.91670	19.46080	HepG2	SUCLG1
ZGPAT	ENSG00000197114.7	475.88900	225.74680	1.07580	16.78670	15.31290	HepG2	DNAJC2
ZGPAT	ENSG00000197114.7	766.20900	404.86680	0.92020	16.17870	14.84410	HepG2	SRSF5
ZGPAT	ENSG00000197114.7	508.39640	193.51570	1.39340	15.45680	13.70220	HepG2	UCHL5
ZGPAT	ENSG00000197114.7	823.64600	410.04670	1.00610	14.60260	13.38000	HepG2	PUF60
ZGPAT	ENSG00000197114.7	511.79590	263.82690	0.95590	13.88640	12.61680	HepG2	SMN1
ZGPAT	ENSG00000197114.7	457.50730	226.24110	1.01580	13.65350	12.38330	HepG2	SAFB2
ZGPAT	ENSG00000197114.7	856.84120	435.28720	0.97700	13.31310	12.21810	HepG2	PUM1
ZGPAT	ENSG00000197114.7	468.34410	190.69200	1.29620	13.70350	11.50920	K562	EFTUD2
ZGPAT	ENSG00000197114.7	1102.38260	722.11610	0.61020	12.13180	11.18870	HepG2	ZNF622
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 96 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZGPAT is not available on ENCORE database.

12 RBPs can affect the splicing of ZGPAT :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	ZGPAT	ENSG00000197114.7	chr20	+	62364938	62366176	62364938	62365091	62366056	62366176	0.19800	0.00000	0.00009	included	HepG2	HNRNPK
RI	ZGPAT	ENSG00000197114.7	chr20	+	62364938	62366176	62364938	62365156	62366056	62366176	0.23100	0.00001	0.00034	included	HepG2	SF3A3
RI	ZGPAT	ENSG00000197114.7	chr20	+	62364938	62366176	62364938	62365091	62365996	62366176	0.55800	0.00050	0.00916	included	HepG2	PCBP1
RI	ZGPAT	ENSG00000197114.7	chr20	+	62364938	62366176	62364938	62365091	62365996	62366176	0.64500	0.00079	0.01532	included	HepG2	SRSF9
RI	ZGPAT	ENSG00000197114.7	chr20	+	62364938	62366176	62364938	62365091	62366056	62366176	0.18800	0.00087	0.00594	included	K562	AQR
RI	ZGPAT	ENSG00000197114.7	chr20	+	62364938	62366176	62364938	62365091	62365996	62366176	0.60300	0.00094	0.00879	included	HepG2	SF3B4
RI	ZGPAT	ENSG00000197114.7	chr20	+	62364938	62366176	62364938	62365127	62365996	62366176	0.30800	0.00128	0.01505	included	K562	EFTUD2
RI	ZGPAT	ENSG00000197114.7	chr20	+	62364938	62366176	62364938	62365091	62366056	62366176	0.13700	0.00200	0.02458	included	HepG2	NCBP2
RI	ZGPAT	ENSG00000197114.7	chr20	+	62364938	62366176	62364938	62365091	62365996	62366176	0.47200	0.00270	0.05583	included	HepG2	PTBP1
RI	ZGPAT	ENSG00000197114.7	chr20	+	62364938	62366176	62364938	62365091	62366056	62366176	0.30500	0.00282	0.05327	included	K562	RBM22

Showing 1 to 10 of 12 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZGPAT

General Information

Functions

Localization

Domains (AlphaFold: ZGPAT)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZGPAT is not avaliable on ENCORE database.

40 proteins are bound to ZGPAT RNA:

eCLIP assay for ZGPAT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZGPAT is not available on ENCORE database.

84 RBPs can affect the gene expression of ZGPAT :

The Knockdown/knockout RNA-Seq assay for ZGPAT is not available on ENCORE database.

12 RBPs can affect the splicing of ZGPAT :

The Knockdown/knockout RNA-Seq assay for ZGPAT is not avaliable on ENCORE database.