TOR1AIP1

General Information

Gene Name       : TOR1AIP1
Gene ID             : ENSG00000143337.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TOR1AIP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TOR1AIP1ENSG00000143337.1823.0922.8522.97ENCSR000AEF
HepG2TOR1AIP1ENSG00000143337.1816.5727.8222.20ENCSR985KAT
K562TOR1AIP1ENSG00000143337.1828.4031.5729.98ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TOR1AIP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TOR1AIP1 RNA is bound by 12 proteins.  







eCLIP assay for TOR1AIP1 is not avaliable on ENCORE database.





12 proteins are bound to TOR1AIP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1179888028179888133+3'-UTR5.0765213.21799K562PUM2
chr1179888252179888371+3'-UTR5.061517.70160HepG2UPF1
chr1179887884179887978+3'-UTR5.163898.00788K562UPF1
chr1179888113179888177+3'-UTR3.724434.24288K562UPF1
chr1179888314179888385+3'-UTR4.730315.38606K562FAM120A
chr1179870449179870526+3'-UTR,CDS,intron-Proximal3.837625.06180HepG2BCLAF1
chr1179887799179887842+3'-UTR4.372704.32914K562YBX3
chr1179870437179870513+3'-UTR,CDS3.177645.66840K562ZNF622
chr1179888133179888180+3'-UTR3.740314.13936K562PUM2
chr1179851930179852006+5'-UTR,CDS3.512846.14048K562ZNF622
chr1179853800179853898+5'-UTR,CDS,intron-Proximal3.372205.37652K562BUD13
chr1179851945179852005+5'-UTR,CDS4.049053.80193HepG2GRWD1
chr1179851943179852073+5'-UTR,CDS3.305545.71803K562UCHL5
chr1179887226179887340+CDS3.471434.50206K562SND1
chr1179886913179886993+CDS4.380136.47873K562SND1
chr1179886836179886888+CDS4.378403.19000HepG2SND1
chr1179886769179886837+CDS4.745185.59615K562ZNF622
chr1179852110179852185+CDS,intron-Proximal5.7994710.48996K562AQR
chr1179876948179876993+CDS,intron-Proximal4.003713.44423K562BUD13
chr1179886930179886989+CDS3.113153.03966HepG2SND1
chr1179886614179886671+CDS4.004593.48187K562RBM15
chr1179852005179852066+CDS3.215043.80299HepG2GRWD1
chr1179873157179873222+intron-Proximal5.653079.95272K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TOR1AIP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TOR1AIP1 is not available on ENCORE database.

  • 76 RBPs can affect the levels of TOR1AIP1.  








The Knockdown/knockout RNA-Seq assay for TOR1AIP1 is not available on ENCORE database.





76 RBPs can affect the gene expression of TOR1AIP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TOR1AIP1ENSG00000143337.141011.221601318.07000-0.382302.665601.73940HepG2ABCF1
TOR1AIP1ENSG00000143337.141203.701701044.577800.204501.857101.34110HepG2ACO1
TOR1AIP1ENSG00000143337.142992.609701646.359100.8620011.0536010.05900HepG2AKAP1
TOR1AIP1ENSG00000143337.14719.563201049.52950-0.544508.072206.84750HepG2AKAP8L
TOR1AIP1ENSG00000143337.141077.395501362.26480-0.338502.194501.49090HepG2ASCC1
TOR1AIP1ENSG00000143337.141690.965401437.453600.234202.271401.63820HepG2AUH
TOR1AIP1ENSG00000143337.141946.646401347.335700.530807.637206.44420HepG2CALR
TOR1AIP1ENSG00000143337.14804.929001011.45590-0.329503.002901.94010HepG2YBX3
TOR1AIP1ENSG00000143337.142041.514301384.339000.5603010.456409.36220HepG2CELF1
TOR1AIP1ENSG00000143337.14805.12120966.10910-0.263002.633401.81760HepG2DDX19B
TOR1AIP1ENSG00000143337.14833.981101159.06500-0.474904.109802.88520HepG2DDX5
TOR1AIP1ENSG00000143337.14800.52560993.23870-0.311202.823602.11570HepG2DNAJC21
TOR1AIP1ENSG00000143337.14815.01410984.37390-0.272402.895002.23020HepG2DNAJC2
TOR1AIP1ENSG00000143337.141017.289501302.43360-0.356502.198201.66280HepG2EIF2S1
TOR1AIP1ENSG00000143337.14931.252501439.44140-0.628305.500304.59990HepG2EIF4A3
TOR1AIP1ENSG00000143337.14791.327101401.30900-0.824407.163006.08380HepG2EIF4B
TOR1AIP1ENSG00000143337.14667.251601650.41230-1.3065046.3928044.49330HepG2ETF1
TOR1AIP1ENSG00000143337.14695.559301020.78610-0.553405.984504.75370HepG2EWSR1
TOR1AIP1ENSG00000143337.142263.971801330.925400.766308.781807.50410HepG2FIP1L1
TOR1AIP1ENSG00000143337.14482.438601347.13420-1.4815024.0083022.13720HepG2G3BP1
TOR1AIP1ENSG00000143337.14426.92540750.83300-0.814505.391104.13630HepG2GEMIN5
TOR1AIP1ENSG00000143337.14893.959601382.05330-0.628504.834204.00330HepG2GPKOW
TOR1AIP1ENSG00000143337.14589.215401002.75310-0.767109.703008.60170HepG2HNRNPA1
TOR1AIP1ENSG00000143337.14701.508601115.34620-0.669007.649006.54200HepG2HNRNPC
TOR1AIP1ENSG00000143337.14889.383501267.06810-0.510608.139706.99120HepG2HNRNPF
TOR1AIP1ENSG00000143337.14777.652001107.97450-0.510707.874306.89090HepG2HNRNPU
TOR1AIP1ENSG00000143337.14849.324601247.69680-0.554907.334506.20790HepG2IGF2BP1
TOR1AIP1ENSG00000143337.14809.389901131.76460-0.483707.938706.76420HepG2ILF2
TOR1AIP1ENSG00000143337.141005.814601377.26590-0.453402.699301.71150HepG2KHSRP
TOR1AIP1ENSG00000143337.141094.020001460.72010-0.417002.799502.16530HepG2MATR3
TOR1AIP1ENSG00000143337.141585.057601077.124900.557206.935005.71220HepG2MSI2
TOR1AIP1ENSG00000143337.14861.613101495.16790-0.795208.996907.89340HepG2NCBP2
TOR1AIP1ENSG00000143337.14421.50840953.71800-1.178004.764703.30910HepG2NONO
TOR1AIP1ENSG00000143337.14848.946901169.39370-0.462003.461002.62320HepG2NSUN2
TOR1AIP1ENSG00000143337.14829.03770988.23020-0.253401.931801.30760HepG2PPIL4
TOR1AIP1ENSG00000143337.141296.477301036.243100.323103.663102.78440HepG2PRPF4
TOR1AIP1ENSG00000143337.141048.587301346.08460-0.360304.362303.70920HepG2PTBP1
TOR1AIP1ENSG00000143337.142034.193401162.836700.806705.566604.58720HepG2RAVER1
TOR1AIP1ENSG00000143337.14911.524901498.08340-0.7168015.0411013.96940HepG2NELFE
TOR1AIP1ENSG00000143337.141054.066001395.22390-0.404505.616904.77750HepG2RECQL
TOR1AIP1ENSG00000143337.14975.937601364.99500-0.484004.839803.97000HepG2RPLP0
TOR1AIP1ENSG00000143337.14586.26730820.48410-0.484904.136403.40020HepG2RPS19
TOR1AIP1ENSG00000143337.14824.884001092.27590-0.405102.638201.85490HepG2RPS2
TOR1AIP1ENSG00000143337.14607.98150986.71870-0.6986013.0369011.79170HepG2SAFB2
TOR1AIP1ENSG00000143337.141670.643401258.371000.408702.479001.84110HepG2SF3A3
TOR1AIP1ENSG00000143337.14671.227601305.51770-0.959709.610808.37060HepG2SF3B1
TOR1AIP1ENSG00000143337.141113.474101401.49200-0.331904.014403.32360HepG2SF3B4
TOR1AIP1ENSG00000143337.141802.351201558.011900.210102.288601.81890HepG2SRFBP1
TOR1AIP1ENSG00000143337.141807.696601462.836200.305303.875803.33920HepG2SRSF1
TOR1AIP1ENSG00000143337.141955.749301404.578300.477503.470102.33620HepG2SRSF3
TOR1AIP1ENSG00000143337.14906.119801244.86460-0.458206.733905.72600HepG2SRSF7
TOR1AIP1ENSG00000143337.14551.21100888.93400-0.689504.818403.22870HepG2STAU1
TOR1AIP1ENSG00000143337.14640.785901076.72140-0.7487011.6334010.73380HepG2TIAL1
TOR1AIP1ENSG00000143337.14722.101201086.22080-0.5890010.011109.04030HepG2TRIM56
TOR1AIP1ENSG00000143337.141770.310901138.497900.636807.252506.24230HepG2U2AF1
TOR1AIP1ENSG00000143337.14846.167101115.98010-0.399305.207004.29720HepG2UPF1
TOR1AIP1ENSG00000143337.141313.128301077.439000.285303.236802.59790HepG2UTP3
TOR1AIP1ENSG00000143337.14601.588201018.46510-0.759502.142801.49760HepG2XRN2
TOR1AIP1ENSG00000143337.14463.482201022.62670-1.1417031.3318029.54410HepG2ZC3H8
TOR1AIP1ENSG00000143337.141819.462601227.368200.5678014.8776013.85990HepG2ZNF622
TOR1AIP1ENSG00000143337.14801.171901161.63080-0.536003.550102.06880HepG2ZRANB2
TOR1AIP1ENSG00000143337.141154.39770837.666600.462604.346802.82970K562AARS
TOR1AIP1ENSG00000143337.142213.107301731.776800.353702.668502.08970K562AQR
TOR1AIP1ENSG00000143337.14581.60910752.31860-0.371303.131401.99970K562CSTF2
TOR1AIP1ENSG00000143337.141136.99870849.423900.420602.584401.35020K562EEF2
TOR1AIP1ENSG00000143337.141175.59470860.663200.449803.809702.85100K562EIF4A3
TOR1AIP1ENSG00000143337.141032.71770795.515800.376402.489601.42830K562FKBP4
TOR1AIP1ENSG00000143337.141239.14640895.058100.469206.383105.52040K562FXR1
TOR1AIP1ENSG00000143337.141326.53230900.762300.558304.010503.12030K562G3BP2
TOR1AIP1ENSG00000143337.14600.50410822.85070-0.454503.010301.51770K562GEMIN5
TOR1AIP1ENSG00000143337.14957.476901205.12190-0.331903.748802.81930K562MTPAP
TOR1AIP1ENSG00000143337.141432.778801834.64030-0.356703.057602.18910K562PPIG
TOR1AIP1ENSG00000143337.141361.07020798.683500.768909.744808.33120K562PRPF8
TOR1AIP1ENSG00000143337.141415.518801164.502100.281502.329301.71320K562PTBP1
TOR1AIP1ENSG00000143337.141323.538401046.223800.339103.330202.68890K562RBM15
TOR1AIP1ENSG00000143337.14916.068401175.24410-0.359402.571101.52250K562NELFE
TOR1AIP1ENSG00000143337.141235.17710995.939900.310502.337101.34840K562SAFB
TOR1AIP1ENSG00000143337.141701.218001141.554700.575508.142206.93890K562SRSF1
TOR1AIP1ENSG00000143337.141492.476501121.107500.412703.025302.16270K562SYNCRIP
TOR1AIP1ENSG00000143337.14869.480401114.51320-0.358203.029902.16610K562TIA1
TOR1AIP1ENSG00000143337.141249.11100873.512400.515904.121302.72860K562U2AF1
TOR1AIP1ENSG00000143337.141137.92030902.023500.335103.003302.16630K562U2AF2
TOR1AIP1ENSG00000143337.141244.375001588.81110-0.352502.441601.32020K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TOR1AIP1 is not available on ENCORE database.





3 RBPs can affect the splicing of TOR1AIP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETOR1AIP1ENSG00000143337.14chr1+1798692601798693021798584471798585041798704361798705230.081000.007290.07127includedHepG2U2AF2
MXETOR1AIP1ENSG00000143337.14chr1+1798584471798585041798692601798693021798538261798539041798704361798705230.090000.001530.097961includedHepG2UCHL5
MXETOR1AIP1ENSG00000143337.14chr1+179858447179858504179869260179869313179853826179853904179870436179870523-0.051000.011880.072752includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TOR1AIP1 is not avaliable on ENCORE database.