TLN1

General Information

Gene Name : TLN1
Gene ID : ENSG00000137076.20
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TLN1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TLN1	ENSG00000137076.20	36.39	49.95	43.17	ENCSR000AEF
HepG2	TLN1	ENSG00000137076.20	75.70	27.90	51.80	ENCSR985KAT
K562	TLN1	ENSG00000137076.20	71.30	50.49	60.89	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TLN1 is not avaliable on ENCORE database.

Proteins bound to RNA

TLN1 RNA is bound by 44 proteins.

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eCLIP assay for TLN1 is not avaliable on ENCORE database.

44 proteins are bound to TLN1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	35714640	35714671	-	CDS,intron-Distal,intron-Proximal	6.19579	73.96105	K562	FXR2
chr9	35697561	35697743	-	3'-UTR,intron-Distal	4.74070	69.46216	K562	PCBP1
chr9	35714602	35714640	-	CDS,intron-Distal	5.68908	63.82347	K562	FXR2
chr9	35729799	35729937	-	intron-Distal	6.03559	49.92017	K562	QKI
chr9	35714612	35714640	-	CDS,intron-Distal	5.93637	47.47319	K562	FMR1
chr9	35714644	35714665	-	CDS,intron-Distal,intron-Proximal	5.85977	44.73288	K562	FMR1
chr9	35713666	35713722	-	intron-Distal	7.62177	42.99103	K562	PTBP1
chr9	35712970	35713036	-	CDS,intron-Distal	5.53957	40.95491	K562	FXR2
chr9	35699987	35700067	-	CDS,intron-Distal	5.07421	40.07832	K562	FMR1
chr9	35705576	35705668	-	CDS,intron-Distal,intron-Proximal	5.28075	39.64486	K562	LIN28B
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 467 entries

eCLIP assay for TLN1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TLN1 is not available on ENCORE database.
99 RBPs can affect the levels of TLN1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TLN1 is not available on ENCORE database.

99 RBPs can affect the gene expression of TLN1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TLN1	ENSG00000137076.14	17892.57690	12677.51170	0.49700	35.06080	32.90560	K562	NSUN2
TLN1	ENSG00000137076.14	7278.57070	4600.66630	0.66170	29.74820	28.56250	HepG2	SRSF1
TLN1	ENSG00000137076.14	7253.47260	5080.29110	0.51370	23.31490	22.11310	HepG2	ZNF622
TLN1	ENSG00000137076.14	6007.68720	10187.64940	-0.76190	21.25740	19.09660	K562	SYNCRIP
TLN1	ENSG00000137076.14	6639.15150	9843.36440	-0.56820	16.91700	15.53400	K562	FXR1
TLN1	ENSG00000137076.14	15621.44860	11064.32060	0.49750	15.14550	13.92760	K562	AGGF1
TLN1	ENSG00000137076.14	5526.80270	10436.16710	-0.91710	15.01830	13.23840	K562	HSPD1
TLN1	ENSG00000137076.14	5621.65560	9465.14310	-0.75160	15.16400	13.15080	K562	EIF4A3
TLN1	ENSG00000137076.14	2954.20510	4256.28820	-0.52680	13.69100	12.16990	HepG2	PRPF4
TLN1	ENSG00000137076.14	4712.42110	6762.00290	-0.52100	12.68590	11.73870	HepG2	RBM22
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 110 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TLN1 is not available on ENCORE database.

9 RBPs can affect the splicing of TLN1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TLN1	ENSG00000137076.14	chr9	-	35718352	35718403	35717615	35717783	35718808	35718907	0.24800	0.00000	0.00012	included	HepG2	SUPV3L1
A3SS	TLN1	ENSG00000137076.14	chr9	-	35711591	35711789	35711591	35711778	35712001	35712121	-0.14700	0.00000	0.00015	shorter	K562	SF3B4
A3SS	TLN1	ENSG00000137076.14	chr9	-	35704328	35704520	35704328	35704495	35704665	35704779	0.10700	0.00000	0.00000	longer	K562	AQR
A3SS	TLN1	ENSG00000137076.14	chr9	-	35699028	35699181	35699028	35699153	35699352	35699458	0.16800	0.00000	0.00000	longer	K562	AQR
A3SS	TLN1	ENSG00000137076.14	chr9	-	35700187	35700436	35700187	35700373	35703556	35703673	0.05200	0.00000	0.00000	longer	K562	AQR
SE	TLN1	ENSG00000137076.14	chr9	-	35718352	35718403	35717615	35717783	35718808	35718907	0.22900	0.00001	0.00198	included	HepG2	SSB
A3SS	TLN1	ENSG00000137076.14	chr9	-	35699028	35699245	35699028	35699153	35699352	35699458	0.07700	0.00001	0.00162	longer	K562	SF3B4
SE	TLN1	ENSG00000137076.14	chr9	-	35718352	35718403	35717615	35717783	35718808	35718907	0.15100	0.00002	0.02115	included	HepG2	UPF1
A3SS	TLN1	ENSG00000137076.14	chr9	-	35722857	35722989	35722857	35722918	35723948	35724076	0.06600	0.00004	0.00344	longer	K562	U2AF1
A3SS	TLN1	ENSG00000137076.14	chr9	-	35711251	35711486	35711251	35711391	35711591	35711789	0.07600	0.00026	0.01292	longer	K562	U2AF2

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TLN1

General Information

Functions

Localization

Domains (AlphaFold: TLN1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TLN1 is not avaliable on ENCORE database.

44 proteins are bound to TLN1 RNA:

eCLIP assay for TLN1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TLN1 is not available on ENCORE database.

99 RBPs can affect the gene expression of TLN1 :

The Knockdown/knockout RNA-Seq assay for TLN1 is not available on ENCORE database.

9 RBPs can affect the splicing of TLN1 :

The Knockdown/knockout RNA-Seq assay for TLN1 is not avaliable on ENCORE database.