TFAP4

General Information

Gene Name : TFAP4
Gene ID : ENSG00000090447.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TFAP4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TFAP4	ENSG00000090447.11	1.78	4.79	3.29	ENCSR000AEF
HepG2	TFAP4	ENSG00000090447.11	20.43	7.73	14.08	ENCSR985KAT
K562	TFAP4	ENSG00000090447.11	9.84	7.14	8.49	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TFAP4 is not avaliable on ENCORE database.

Proteins bound to RNA

TFAP4 RNA is bound by 9 proteins.

CanvasJS.com

eCLIP assay for TFAP4 is not avaliable on ENCORE database.

9 proteins are bound to TFAP4 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	4322042	4322109	-	intron-Distal	4.39711	10.59961	HepG2	CSTF2T
chr16	4307784	4307912	-	3'-UTR,intron-Distal	5.17249	8.87118	HepG2	UPF1
chr16	4307544	4307615	-	3'-UTR,intron-Distal	3.69596	7.55751	K562	UPF1
chr16	4312283	4312329	-	CDS,intron-Distal,intron-Proximal	4.02274	5.34978	HepG2	PRPF8
chr16	4307794	4307863	-	3'-UTR,intron-Distal	3.75416	4.98444	HepG2	GRSF1
chr16	4307225	4307313	-	3'-UTR,intron-Distal	4.42895	4.92816	K562	CPEB4
chr16	4313455	4313537	-	intron-Distal	3.52439	4.60046	HepG2	CSTF2T
chr16	4307571	4307627	-	3'-UTR,intron-Distal	3.36509	4.50192	K562	FAM120A
chr16	4321919	4321975	-	intron-Distal	4.26690	4.10339	HepG2	CSTF2T
chr16	4322580	4322626	-	intron-Distal	3.27728	3.92299	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 17 entries

eCLIP assay for TFAP4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TFAP4 is not available on ENCORE database.
93 RBPs can affect the levels of TFAP4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TFAP4 is not available on ENCORE database.

93 RBPs can affect the gene expression of TFAP4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TFAP4	ENSG00000090447.7	108.64250	292.80590	-1.43040	13.54610	12.66980	HepG2	SRSF1
TFAP4	ENSG00000090447.7	197.76040	399.08920	-1.01300	12.76160	11.80450	HepG2	ZNF622
TFAP4	ENSG00000090447.7	125.14030	330.06920	-1.39920	13.29240	11.66340	HepG2	MSI2
TFAP4	ENSG00000090447.7	105.79910	300.25810	-1.50490	12.60680	11.27030	HepG2	EIF4A3
TFAP4	ENSG00000090447.7	970.37740	589.97560	0.71780	12.20260	10.94110	K562	DDX47
TFAP4	ENSG00000090447.7	746.49910	446.24460	0.74220	10.64930	9.63080	K562	AGGF1
TFAP4	ENSG00000090447.7	133.61520	329.04640	-1.30020	10.53310	9.38620	HepG2	DDX3X
TFAP4	ENSG00000090447.7	90.90110	237.23780	-1.38400	10.25040	8.90660	HepG2	CALR
TFAP4	ENSG00000090447.7	181.48960	383.27870	-1.07850	9.82560	8.75640	K562	HNRNPC
TFAP4	ENSG00000090447.7	137.30580	283.94420	-1.04820	9.54030	8.41910	HepG2	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 107 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TFAP4 is not available on ENCORE database.

8 RBPs can affect the splicing of TFAP4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	TFAP4	ENSG00000090447.7	chr16	-	4311779	4312423	4311779	4311950	4312324	4312423	0.10500	0.00000	0.00002	included	K562	AQR
RI	TFAP4	ENSG00000090447.7	chr16	-	4311779	4312423	4311779	4311950	4312324	4312423	0.09900	0.00012	0.02254	included	HepG2	SRSF7
RI	TFAP4	ENSG00000090447.7	chr16	-	4311779	4312423	4311779	4311950	4312324	4312423	0.07400	0.00021	0.00177	included	K562	PUS1
RI	TFAP4	ENSG00000090447.7	chr16	-	4311779	4312423	4311779	4311950	4312324	4312423	0.13900	0.00024	0.00273	included	HepG2	SF3B4
RI	TFAP4	ENSG00000090447.7	chr16	-	4311779	4312423	4311779	4311950	4312324	4312423	0.07500	0.00121	0.01359	included	HepG2	U2AF1
RI	TFAP4	ENSG00000090447.7	chr16	-	4311779	4312423	4311779	4311950	4312324	4312423	0.12100	0.00126	0.04301	included	HepG2	TIA1
RI	TFAP4	ENSG00000090447.7	chr16	-	4311779	4312423	4311779	4311950	4312324	4312423	0.11100	0.00312	0.03877	included	HepG2	PCBP1
A3SS	TFAP4	ENSG00000090447.7	chr16	-	4312536	4312755	4312536	4312702	4322658	4323076	0.06900	0.00403	0.02393	longer	K562	AQR
RI	TFAP4	ENSG00000090447.7	chr16	-	4311779	4312423	4311779	4311950	4312324	4312423	0.09900	0.00409	0.07657	included	HepG2	SRSF1
A3SS	TFAP4	ENSG00000090447.7	chr16	-	4310455	4310612	4310455	4310596	4311779	4311950	0.08400	0.00445	0.02607	longer	K562	AQR

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TFAP4

General Information

Functions

Localization

Domains (AlphaFold: TFAP4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TFAP4 is not avaliable on ENCORE database.

9 proteins are bound to TFAP4 RNA:

eCLIP assay for TFAP4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TFAP4 is not available on ENCORE database.

93 RBPs can affect the gene expression of TFAP4 :

The Knockdown/knockout RNA-Seq assay for TFAP4 is not available on ENCORE database.

8 RBPs can affect the splicing of TFAP4 :

The Knockdown/knockout RNA-Seq assay for TFAP4 is not avaliable on ENCORE database.