SLC35B1

General Information

Gene Name       : SLC35B1
Gene ID             : ENSG00000121073.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SLC35B1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC35B1ENSG00000121073.1436.6435.2935.97ENCSR000AEF
HepG2SLC35B1ENSG00000121073.1485.8392.6489.23ENCSR985KAT
K562SLC35B1ENSG00000121073.1451.0647.9449.50ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC35B1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC35B1 RNA is bound by 11 proteins.  







eCLIP assay for SLC35B1 is not avaliable on ENCORE database.





11 proteins are bound to SLC35B1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174778030447780374-3'-UTR,CDS,intron-Distal,intron-Proximal3.936573.87091K562IGF2BP2
chr174778146547781587-3'-UTR,CDS,intron-Distal,intron-Proximal3.9703111.47083K562YBX3
chr174778054847780651-3'-UTR,CDS,intron-Distal,intron-Proximal3.842147.86995K562YBX3
chr174778028147780347-3'-UTR,CDS,intron-Distal3.328304.24460HepG2IGF2BP1
chr174778141647781464-3'-UTR,CDS,intron-Distal,intron-Proximal3.442344.98672K562AQR
chr174778245847782518-5'-UTR,CDS,intron-Distal,intron-Proximal5.009743.37645HepG2PRPF8
chr174778511647785297-5'-UTR,CDS,intron-Distal,intron-Proximal4.2324017.85655K562DDX3X
chr174778521047785285-5'-UTR,CDS,intron-Distal,intron-Proximal3.213723.40404HepG2NCBP2
chr174778258747782656-5'-UTR,CDS,intron-Distal,intron-Proximal3.523864.35314HepG2U2AF2
chr174778318247783254-5'-UTR,CDS,intron-Distal,intron-Proximal4.768675.34978HepG2PRPF8
chr174778509047785219-5'-UTR,CDS,intron-Distal,intron-Proximal3.848634.94100K562FTO
chr174778519147785292-5'-UTR,CDS,intron-Distal,intron-Proximal6.4409180.80526HepG2DDX3X
chr174778362847783685-CDS,intron-Distal,intron-Proximal4.127123.49905HepG2PPIG
chr174778358547783636-CDS,intron-Distal3.746379.88356K562YBX3
chr174778427247784328-CDS,intron-Distal,intron-Proximal5.077076.44303K562AQR
chr174778512647785191-CDS,intron-Distal,intron-Proximal4.4588820.67574HepG2DDX3X
chr174778286347782910-intron-Distal4.135804.69074K562PTBP1
chr174778274847782783-intron-Distal,intron-Proximal4.693544.30178K562PTBP1
chr174778269147782748-intron-Distal,intron-Proximal4.246995.63677K562PTBP1
chr174778276647782911-intron-Distal,intron-Proximal4.7327218.34426HepG2PTBP1
chr174778278347782863-intron-Distal,intron-Proximal6.2405215.53860K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC35B1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC35B1 is not available on ENCORE database.

  • 76 RBPs can affect the levels of SLC35B1.  








The Knockdown/knockout RNA-Seq assay for SLC35B1 is not available on ENCORE database.





76 RBPs can affect the gene expression of SLC35B1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC35B1ENSG00000121073.9999.21540759.452200.395704.938504.17130HepG2ACO1
SLC35B1ENSG00000121073.91546.435801003.425700.623905.377404.66550HepG2AKAP1
SLC35B1ENSG00000121073.9705.71240511.823700.463303.409002.75160HepG2BOP1
SLC35B1ENSG00000121073.9777.98850556.299700.483804.242003.31100HepG2CALR
SLC35B1ENSG00000121073.91060.53780788.792000.427003.107802.29040HepG2CIRBP
SLC35B1ENSG00000121073.9923.85190759.206800.283102.829802.15910HepG2CKAP4
SLC35B1ENSG00000121073.9722.47360521.582700.469902.093901.43320HepG2CNOT7
SLC35B1ENSG00000121073.91542.82960961.195100.682607.249606.28210HepG2DDX3X
SLC35B1ENSG00000121073.9868.89000726.569200.258001.998701.40840HepG2DKC1
SLC35B1ENSG00000121073.9680.48970489.525300.475102.958102.00660HepG2EEF2
SLC35B1ENSG00000121073.9689.71400408.050500.757207.009405.24230HepG2EFTUD2
SLC35B1ENSG00000121073.9580.66490397.360100.547203.613402.58810HepG2EIF3D
SLC35B1ENSG00000121073.91455.81770877.176800.730807.370606.32740HepG2EIF4A3
SLC35B1ENSG00000121073.91887.660001372.366600.459807.450506.54400HepG2ETF1
SLC35B1ENSG00000121073.91036.87540742.049200.482604.782703.69040HepG2EWSR1
SLC35B1ENSG00000121073.9532.77490761.91960-0.516102.818801.69440HepG2FUS
SLC35B1ENSG00000121073.9618.23900871.63700-0.495603.667702.63420HepG2G3BP2
SLC35B1ENSG00000121073.9508.31790353.790300.522703.234802.25700HepG2GEMIN5
SLC35B1ENSG00000121073.9919.44480681.819100.431302.901602.19340HepG2HNRNPC
SLC35B1ENSG00000121073.9854.027301087.40500-0.348501.911201.30780HepG2HNRNPF
SLC35B1ENSG00000121073.91312.32840831.396300.658407.424306.32160HepG2HNRNPK
SLC35B1ENSG00000121073.9655.82850508.340300.367402.050601.50000HepG2HNRNPLL
SLC35B1ENSG00000121073.9675.94070508.999600.409102.633801.70350HepG2HNRNPM
SLC35B1ENSG00000121073.91183.81180897.155200.399902.338901.57970HepG2LARP4
SLC35B1ENSG00000121073.91342.23710885.380500.600205.627004.70300HepG2MAGOH
SLC35B1ENSG00000121073.91219.84320890.329900.454203.109202.44380HepG2MATR3
SLC35B1ENSG00000121073.9663.95930415.855200.674903.363002.20710HepG2METAP2
SLC35B1ENSG00000121073.9763.94410597.005000.355602.120701.40760HepG2MSI2
SLC35B1ENSG00000121073.9352.21520518.39830-0.557602.419501.51940HepG2MTPAP
SLC35B1ENSG00000121073.91236.96640911.297300.440703.117902.44800HepG2NCBP2
SLC35B1ENSG00000121073.91092.63380888.151700.298802.907402.28860HepG2PCBP1
SLC35B1ENSG00000121073.9458.51730604.11310-0.397803.211602.42320HepG2PPIL4
SLC35B1ENSG00000121073.9508.46760618.07910-0.281601.996301.33130HepG2PRPF4
SLC35B1ENSG00000121073.9925.332901141.42810-0.302801.976101.46100HepG2PUF60
SLC35B1ENSG00000121073.9935.79580773.539600.274602.592801.99090HepG2PUS1
SLC35B1ENSG00000121073.91363.130301147.030000.248902.198501.72240HepG2RBM22
SLC35B1ENSG00000121073.9722.81470936.68730-0.373903.914903.19860HepG2RECQL
SLC35B1ENSG00000121073.9482.64860656.61980-0.444102.790102.00050HepG2RRP9
SLC35B1ENSG00000121073.91213.64150749.447400.695303.920103.11140HepG2SF3A3
SLC35B1ENSG00000121073.91138.21100940.915500.274502.446601.88590HepG2SF3B4
SLC35B1ENSG00000121073.9846.531601094.60520-0.370803.221102.47380HepG2SLBP
SLC35B1ENSG00000121073.9830.71780559.858300.569203.039702.22000HepG2SNRNP70
SLC35B1ENSG00000121073.9573.02470819.82410-0.516704.057502.14120HepG2SRP68
SLC35B1ENSG00000121073.91258.21860982.094200.357304.109003.56060HepG2SRSF1
SLC35B1ENSG00000121073.9640.28610798.97040-0.319403.029002.45690HepG2SRSF9
SLC35B1ENSG00000121073.91297.243801124.758200.205701.763201.33080HepG2SSB
SLC35B1ENSG00000121073.9361.21970498.09040-0.463503.488902.44310HepG2SUPT6H
SLC35B1ENSG00000121073.9682.79200856.88440-0.327701.954501.37170HepG2SUPV3L1
SLC35B1ENSG00000121073.9921.27410510.589800.851404.112202.82940HepG2TBRG4
SLC35B1ENSG00000121073.9855.29640631.127600.438402.709802.08660HepG2U2AF1
SLC35B1ENSG00000121073.9359.52230506.13560-0.493403.312702.48410HepG2UCHL5
SLC35B1ENSG00000121073.91029.86420664.645900.6317011.024709.80030HepG2UPF1
SLC35B1ENSG00000121073.91003.27920683.158500.554305.845504.37610HepG2UTP18
SLC35B1ENSG00000121073.9741.76030609.998500.282002.257401.64260HepG2ZC3H8
SLC35B1ENSG00000121073.9985.68750822.854300.260402.352601.82210K562AGGF1
SLC35B1ENSG00000121073.91107.21030904.232300.292102.167501.31040K562AKAP8
SLC35B1ENSG00000121073.91292.95570856.227000.594507.123306.03340K562AKAP8L
SLC35B1ENSG00000121073.91448.152101096.000300.401903.121602.50550K562AQR
SLC35B1ENSG00000121073.91180.14110898.406700.393404.338503.16650K562ATP5C1
SLC35B1ENSG00000121073.9674.38710508.011200.408603.067001.96710K562DDX3X
SLC35B1ENSG00000121073.9965.82140736.514000.390904.356403.56420K562DDX47
SLC35B1ENSG00000121073.91296.60440921.300200.492907.277605.74450K562DKC1
SLC35B1ENSG00000121073.9667.10550516.100400.370202.204401.38960K562EFTUD2
SLC35B1ENSG00000121073.9789.12790552.559700.514003.362202.21470K562EIF3D
SLC35B1ENSG00000121073.9714.34110458.330100.640107.160505.89240K562EIF3G
SLC35B1ENSG00000121073.9876.10300530.733500.723008.234906.82010K562EIF4A3
SLC35B1ENSG00000121073.9836.86530551.938300.600407.516906.58520K562FXR1
SLC35B1ENSG00000121073.9324.91770474.93810-0.547703.466502.17900K562HNRNPF
SLC35B1ENSG00000121073.9874.36220625.887300.482203.555602.13590K562HNRNPK
SLC35B1ENSG00000121073.91275.83700867.838500.555805.713404.58500K562HSPD1
SLC35B1ENSG00000121073.9829.42250658.622800.332602.472601.67490K562MAGOH
SLC35B1ENSG00000121073.91214.10850869.816600.481005.174003.54480K562MAK16
SLC35B1ENSG00000121073.91013.49880713.482300.506303.216702.25110K562NAA15
SLC35B1ENSG00000121073.9689.44270529.986800.379402.751301.52680K562NCBP2
SLC35B1ENSG00000121073.9521.02140661.78910-0.345003.168202.37340K562NSUN2
SLC35B1ENSG00000121073.9793.26630409.733400.953004.744603.35190K562PABPN1
SLC35B1ENSG00000121073.9819.44290486.994100.750602.878901.39280K562PPP1R8
SLC35B1ENSG00000121073.9997.54520502.225800.9899012.9538011.31890K562PRPF8
SLC35B1ENSG00000121073.91275.72900849.072400.587306.319105.53690K562PUS1
SLC35B1ENSG00000121073.91149.42980827.351000.474204.320003.59550K562RBM15
SLC35B1ENSG00000121073.9982.61840511.553500.9416010.310008.70880K562RPS19
SLC35B1ENSG00000121073.91026.80470374.633501.454506.472704.37500K562SF1
SLC35B1ENSG00000121073.9754.24260581.714700.374602.978502.09010K562SF3B4
SLC35B1ENSG00000121073.9789.85350430.365300.875903.742602.23260K562SNRNP200
SLC35B1ENSG00000121073.9314.28170440.12150-0.485802.873401.79590K562SRSF4
SLC35B1ENSG00000121073.9719.06830496.227100.535003.678702.73260K562SYNCRIP
SLC35B1ENSG00000121073.9748.72110542.235200.465402.899401.77710K562U2AF1
SLC35B1ENSG00000121073.9807.48100560.087000.527704.946403.87440K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC35B1 is not available on ENCORE database.





21 RBPs can affect the splicing of SLC35B1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC35B1ENSG00000121073.9chr17-4778432647784430477834374778367147785091477853170.127000.000060.00265includedHepG2HNRNPK
SESLC35B1ENSG00000121073.9chr17-4778470447784806477843264778443047785437477855250.446000.000750.05918includedHepG2TBRG4
SESLC35B1ENSG00000121073.9chr17-4778470447784806477843264778443047785437477855250.315000.001210.08813includedHepG2QKI
SESLC35B1ENSG00000121073.9chr17-4778470447784806477843264778443047785437477855250.304000.000280.00415includedK562AQR
SESLC35B1ENSG00000121073.9chr17-477835654778369647783227477832584778432647784430-0.061000.003990.03870excludedK562AQR
SESLC35B1ENSG00000121073.9chr17-4778432647784430477834374778367147785091477853170.100000.001250.08104includedHepG2DDX3X
SESLC35B1ENSG00000121073.9chr17-4778470447784806477843264778443047785091477853110.126000.000360.02700includedHepG2NCBP2
SESLC35B1ENSG00000121073.9chr17-4778432647784430477834374778367147785091477853170.114000.000480.02433includedHepG2MATR3
SESLC35B1ENSG00000121073.9chr17-4778470447784806477843264778443047785437477855250.446000.000000.00007includedHepG2SRSF1
SESLC35B1ENSG00000121073.9chr17-4778432647784430477834374778367147785091477853170.106000.000420.01538includedHepG2SF3A3
SESLC35B1ENSG00000121073.9chr17-4778470447784806477843264778443047785437477855250.321000.000430.02465includedHepG2PCBP1
SESLC35B1ENSG00000121073.9chr17-4777919147779284477786484777887247780219477803730.069000.000000.00003includedK562HNRNPC
A3SSSLC35B1ENSG00000121073.9chr17-477835654778369647783565477836714778432647784430-0.430000.000000.00000shorterHepG2SF3A3
A3SSSLC35B1ENSG00000121073.9chr17-477835654778369647783565477836714778432647784430-0.371000.000060.03157shorterK562CPSF6
A3SSSLC35B1ENSG00000121073.9chr17-477832274778335247783227477832584778356547783696-0.082000.000350.04461shorterK562FXR1
A3SSSLC35B1ENSG00000121073.9chr17-477835654778369647783565477836714778432647784430-0.163000.000110.07253shorterHepG2DDX55
A3SSSLC35B1ENSG00000121073.9chr17-4778059447780830477805944778065647781461477816090.104000.000000.00000longerK562AQR
A3SSSLC35B1ENSG00000121073.9chr17-4778021947780433477802194778037347780549477806560.080000.000000.00000longerK562AQR
A3SSSLC35B1ENSG00000121073.9chr17-4778146147781690477814614778158847782485477826430.100000.000000.00000longerK562AQR
A3SSSLC35B1ENSG00000121073.9chr17-4778322747783326477832274778325847783565477836960.077000.000070.00062longerK562AQR
A3SSSLC35B1ENSG00000121073.9chr17-4778432647784506477843264778443047785091477853170.127000.000010.00006longerK562AQR
A3SSSLC35B1ENSG00000121073.9chr17-477834954778369647783495477836714778432647784506-0.117000.020080.09566shorterK562AQR
RISLC35B1ENSG00000121073.9chr17-4778248547783671477824854778264347783227477836710.099000.000070.00069includedK562PUS1
RISLC35B1ENSG00000121073.9chr17-4778248547783671477824854778264347783227477836710.079000.015520.08677includedHepG2U2AF2
RISLC35B1ENSG00000121073.9chr17-477832274778367147783227477832584778356547783671-0.114000.000930.08789excludedK562MATR3
RISLC35B1ENSG00000121073.9chr17-4778322747783671477832274778325847783565477836710.116000.001130.01242includedK562AKAP8L
RISLC35B1ENSG00000121073.9chr17-4778248547783671477824854778264347783227477836710.094000.000230.00310includedK562AKAP8L
RISLC35B1ENSG00000121073.9chr17-477832274778367147783227477832584778356547783671-0.133000.000220.02102excludedK562KHSRP
RISLC35B1ENSG00000121073.9chr17-4778322747783671477832274778325847783565477836710.058000.008790.06916includedHepG2RBM22
RISLC35B1ENSG00000121073.9chr17-4778248547783671477824854778264347783227477836710.086000.001320.01846includedK562UTP18
RISLC35B1ENSG00000121073.9chr17-4778322747783671477832274778325847783565477836710.265000.000000.00000includedK562AQR
RISLC35B1ENSG00000121073.9chr17-477832274778367147783227477832584778356547783671-0.099000.004970.07383excludedK562PTBP1
RISLC35B1ENSG00000121073.9chr17-477832274778367147783227477832584778356547783671-0.150000.000000.00019excludedK562FXR1
MXESLC35B1ENSG00000121073.9chr17-47783227477836714778432647784430477824854778264347784704477848060.083000.000010.000111includedK562AQR
MXESLC35B1ENSG00000121073.9chr17-4778322747783326477835654778369647782485477826434778432647784430-0.161000.000010.000122includedK562AQR
MXESLC35B1ENSG00000121073.9chr17-4778322747783284477835654778369647782485477826434778432647784430-0.134000.000040.000582includedK562AQR
MXESLC35B1ENSG00000121073.9chr17-4778322747783314477835654778369647782485477826434778432647784430-0.152000.000010.000222includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC35B1 is not avaliable on ENCORE database.