SEC24D

General Information

Gene Name       : SEC24D
Gene ID             : ENSG00000150961.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SEC24D)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SEC24DENSG00000150961.1429.5426.5728.05ENCSR000AEF
HepG2SEC24DENSG00000150961.1429.8234.9932.41ENCSR985KAT
K562SEC24DENSG00000150961.1412.1713.1912.68ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
SEC24D14687S1Submitted, ENCORE2BGHcLV43-49, Submitted, ENCORE2BGKcLV42-83, Submitted, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
SEC24DK562CRISPRSEC24D-BGKcLV42-83,SEC24D-BGKcLV42-84NT-BGKcLV42-1,NT-BGKcLV42-273.9,81.6SequencedENCORE2
SEC24DHepG2CRISPRSEC24D-BGHcLV43-49,SEC24D-BGHcLV43-50NT-BGHcLV43-1,NT-BGHcLV43-263.8,64.9SequencedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
SEC24DProduct_ID: 14687S
Lot_ID: 1
Source: Cell Signaling Technology
Target Name: SEC24D-human		 SEC24D-HEPG2-CRISPR-14687S.png<br>Caption: Western blot following CRISPR against SEC24D in HepG2 whole cell lysate using SEC24D specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SEC24D. SEC24D protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
 CST_14687S_1_SEC24D.png<br>Caption: IP-WB analysis of 14687S whole cell lysate using the SEC24D specific antibody, 14687S. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the SEC24D-specific antibody, 14687S. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 SEC24D-K562-CRISPR-14687S.png<br>Caption: Western blot following CRISPR against SEC24D in K562 whole cell lysate using SEC24D specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SEC24D. SEC24D protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for SEC24D is not avaliable on ENCORE database.



Proteins bound to RNA
  • SEC24D RNA is bound by 30 proteins.  







eCLIP assay for SEC24D is not avaliable on ENCORE database.





30 proteins are bound to SEC24D RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4119661786119661850-3'-UTR,CDS,intron-Distal,intron-Proximal4.683714.02817HepG2PRPF8
chr4119659465119659486-3'-UTR,CDS,intron-Distal3.464643.87559K562YBX3
chr4119673859119674005-3'-UTR,CDS,intron-Distal,intron-Proximal3.757165.14242HepG2G3BP1
chr4119673853119673923-3'-UTR,CDS,intron-Distal,intron-Proximal4.549055.13243HepG2GRWD1
chr4119665251119665325-3'-UTR,CDS,intron-Distal,intron-Proximal4.516614.20763HepG2U2AF2
chr4119644018119644115-3'-UTR,intron-Distal,intron-Proximal4.025164.17294K562DDX6
chr4119644020119644100-3'-UTR,intron-Distal,intron-Proximal3.002263.06355HepG2KHSRP
chr4119661918119661984-3'-UTR,CDS,intron-Distal,intron-Proximal3.100163.05068HepG2U2AF2
chr4119652521119652581-3'-UTR,CDS,intron-Distal4.080314.28220HepG2GRWD1
chr4119644021119644115-3'-UTR,intron-Distal,intron-Proximal5.1343311.30105HepG2FUBP3
chr4119653959119654057-3'-UTR,CDS,intron-Distal3.540505.95282K562YBX3
chr4119685951119685993-3'-UTR,CDS,intron-Distal,intron-Proximal3.580345.76104HepG2BCLAF1
chr4119685961119686073-3'-UTR,CDS,intron-Distal,intron-Proximal3.568746.77066K562UCHL5
chr4119686014119686066-3'-UTR,CDS,intron-Distal3.676663.87469HepG2BCLAF1
chr4119659486119659534-3'-UTR,CDS,intron-Distal3.579383.87559K562YBX3
chr4119678870119678949-3'-UTR,CDS,intron-Distal,intron-Proximal3.8991710.36594HepG2BCLAF1
chr4119661861119661962-3'-UTR,CDS,intron-Distal3.703706.36847HepG2BCLAF1
chr4119678961119679001-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.100484.12139K562DDX24
chr4119685953119686030-3'-UTR,CDS,intron-Distal,intron-Proximal4.446779.20049K562DDX24
chr4119666116119666174-3'-UTR,CDS,intron-Distal4.882674.54113K562IGF2BP2
chr4119689327119689398-3'-UTR,CDS,intron-Distal,intron-Proximal3.684863.05460HepG2PPIG
chr4119718835119718962-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.972893.57974K562IGF2BP1
chr4119673851119673916-3'-UTR,CDS,intron-Distal,intron-Proximal4.483107.49468HepG2BCLAF1
chr4119718836119718963-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.318825.80517HepG2GRWD1
chr4119678876119678959-3'-UTR,CDS,intron-Distal3.245564.50748HepG2GRWD1
chr4119686003119686070-3'-UTR,CDS,intron-Distal3.455853.60157HepG2GRWD1
chr4119736245119736322-5'-UTR,CDS,intron-Distal,intron-Proximal3.071236.79445K562U2AF2
chr4119736575119736621-5'-UTR,CDS,intron-Distal,intron-Proximal4.601915.02679K562BUD13
chr4119757144119757195-5'-UTR,intron-Distal3.682776.05537HepG2DDX3X
chr4119738488119738561-5'-UTR,CDS,intron-Distal3.164573.99175HepG2IGF2BP1
chr4119736270119736320-5'-UTR,CDS,intron-Distal,intron-Proximal3.6189310.21568K562BUD13
chr4119738419119738477-5'-UTR,CDS,intron-Distal6.5981917.57851HepG2IGF2BP1
chr4119754733119754812-5'-UTR,CDS,intron-Distal,intron-Proximal4.078285.64813K562DDX24
chr4119757195119757241-5'-UTR,intron-Distal3.210724.25624HepG2DDX3X
chr4119757095119757121-5'-UTR,intron-Distal3.483403.90826K562ZNF622
chr4119738429119738502-5'-UTR,CDS,intron-Distal5.193569.58662K562PCBP1
chr4119736193119736314-5'-UTR,CDS,intron-Distal,intron-Proximal3.394897.98451K562DDX24
chr4119738418119738501-5'-UTR,CDS,intron-Distal,intron-Proximal5.1897913.39138K562IGF2BP1
chr4119738418119738501-5'-UTR,CDS,intron-Distal,intron-Proximal3.640114.28621K562IGF2BP2
chr4119738424119738512-5'-UTR,CDS,intron-Distal3.794243.73561HepG2IGF2BP3
chr4119745820119745925-5'-UTR,CDS,intron-Distal,intron-Proximal3.275877.67315K562BUD13
chr4119736226119736322-5'-UTR,CDS,intron-Distal,intron-Proximal3.703316.36289HepG2U2AF1
chr4119736702119736796-5'-UTR,CDS,intron-Distal,intron-Proximal3.002543.03913HepG2IGF2BP1
chr4119738421119738493-5'-UTR,CDS,intron-Distal3.469974.69671HepG2PPIG
chr4119736597119736605-intron-Distal,intron-Proximal5.647048.34710K562AQR
chr4119712368119712468-intron-Distal3.019935.88625HepG2HNRNPL
chr4119731146119731239-intron-Distal4.7348622.34024K562AGGF1
chr4119721310119721394-intron-Distal4.654035.01208K562MATR3
chr4119721924119721980-intron-Distal4.245034.30850HepG2QKI
chr4119717206119717275-intron-Distal4.002906.87274K562HNRNPL
chr4119736560119736597-intron-Distal,intron-Proximal5.9966010.48996K562AQR
chr4119720245119720390-intron-Distal3.791814.64467HepG2HNRNPL
chr4119720894119720962-intron-Distal4.154033.90241K562MATR3
chr4119734341119734375-intron-Distal7.8220043.01636HepG2XPO5
chr4119731146119731260-intron-Distal5.378798.84337K562HNRNPL
chr4119717114119717312-intron-Distal3.866939.86969HepG2HNRNPL
chr4119673071119673151-intron-Distal,intron-Proximal3.831154.89208K562AQR
chr4119645203119645279-intron-Distal3.930446.08725HepG2HNRNPL
chr4119720755119720827-intron-Distal4.320744.47026K562MATR3
chr4119731262119731331-intron-Distal3.255164.54315HepG2HNRNPL
chr4119731159119731245-intron-Distal5.106678.32644HepG2HNRNPL
chr4119734277119734341-intron-Distal6.1487920.00721HepG2XPO5
chr4119685224119685297-intron-Distal3.888413.19026HepG2HNRNPL
chr4119697208119697303-intron-Distal5.3798030.10785HepG2PCBP2
chr4119734375119734418-intron-Distal6.4945616.41446HepG2XPO5
chr4119704391119704510-intron-Distal3.726576.98424K562UCHL5
chr4119717275119717320-intron-Distal3.219383.81590K562HNRNPL
chr4119708736119708805-intron-Distal4.045593.48745HepG2ILF3
chr4119714169119714241-intron-Distal3.930753.84404HepG2HNRNPC
chr4119720243119720384-intron-Distal4.4503110.93465K562HNRNPL
chr4119725994119726070-intron-Distal4.029663.34609K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SEC24D is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SEC24D is not available on ENCORE database.

  • 131 RBPs can affect the levels of SEC24D.  








The Knockdown/knockout RNA-Seq assay for SEC24D is not available on ENCORE database.





131 RBPs can affect the gene expression of SEC24D :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SEC24DENSG00000150961.101888.872102296.09500-0.281702.136901.30590HepG2ABCF1
SEC24DENSG00000150961.101454.106601805.78690-0.312504.604503.85800HepG2ACO1
SEC24DENSG00000150961.10443.950101397.80030-1.6547037.6815034.73810HepG2ADAR
SEC24DENSG00000150961.101231.438101712.95410-0.476103.877202.64830HepG2AKAP8
SEC24DENSG00000150961.101120.116801814.13250-0.6956016.7237015.05230HepG2AKAP8L
SEC24DENSG00000150961.102949.424602470.414800.255603.403202.65660HepG2AUH
SEC24DENSG00000150961.101169.821601577.60810-0.431502.835601.88550HepG2BCCIP
SEC24DENSG00000150961.10825.937802241.34800-1.4403038.2585036.49830HepG2BOP1
SEC24DENSG00000150961.102350.137601720.069700.450205.262803.59170HepG2BUD13
SEC24DENSG00000150961.10814.653601175.38390-0.528902.808702.03780HepG2CNOT7
SEC24DENSG00000150961.102658.857202057.649000.369703.471102.70900HepG2CPSF6
SEC24DENSG00000150961.101438.837201890.61210-0.394003.961302.64730HepG2CPSF7
SEC24DENSG00000150961.10533.74110974.50850-0.8685010.985609.08240HepG2CSTF2
SEC24DENSG00000150961.102593.878902126.527000.286505.309604.32880HepG2DAZAP1
SEC24DENSG00000150961.10943.007501670.01760-0.8245026.0510024.14080HepG2DDX19B
SEC24DENSG00000150961.101860.736501482.487300.327802.682401.40360HepG2DDX47
SEC24DENSG00000150961.101566.871702336.62170-0.576503.109802.07420HepG2DDX59
SEC24DENSG00000150961.101466.976601727.60570-0.235902.501201.85230HepG2DKC1
SEC24DENSG00000150961.102059.076501527.342900.430903.583002.91260HepG2EIF2S1
SEC24DENSG00000150961.10842.177501264.89170-0.586807.030205.43550HepG2EIF3G
SEC24DENSG00000150961.102159.438201643.465800.393802.236101.61380HepG2EIF4B
SEC24DENSG00000150961.102791.617102009.771000.474005.303804.19580HepG2EIF4G2
SEC24DENSG00000150961.101298.331001988.82470-0.615307.984006.26310HepG2ESF1
SEC24DENSG00000150961.10744.978602836.50330-1.92880122.69810119.83610HepG2ETF1
SEC24DENSG00000150961.101039.091601764.42860-0.7639013.0053011.25210HepG2EWSR1
SEC24DENSG00000150961.101889.147001276.548900.565406.179004.58840HepG2FASTKD2
SEC24DENSG00000150961.101452.651102318.44770-0.674506.965005.80080HepG2FIP1L1
SEC24DENSG00000150961.101307.046101017.008900.361902.961502.15060HepG2FUBP3
SEC24DENSG00000150961.10934.607001579.81430-0.757308.475907.34530HepG2G3BP1
SEC24DENSG00000150961.101325.562501677.31940-0.339602.461701.62360HepG2G3BP2
SEC24DENSG00000150961.10858.796802332.42180-1.4414029.2381027.41990HepG2GPKOW
SEC24DENSG00000150961.101325.926101723.90850-0.378705.738004.38790HepG2HDGF
SEC24DENSG00000150961.101181.584301420.94260-0.266101.910001.36190HepG2HNRNPA1
SEC24DENSG00000150961.102294.039001954.389400.231102.745401.81360HepG2HNRNPA2B1
SEC24DENSG00000150961.101016.586501580.58150-0.636708.064006.92690HepG2HNRNPC
SEC24DENSG00000150961.101040.402301599.96240-0.620907.196506.10970HepG2HNRNPK
SEC24DENSG00000150961.101545.911101937.07180-0.325405.292904.38590HepG2HNRNPL
SEC24DENSG00000150961.101819.824902225.88070-0.290602.075701.52220HepG2HNRNPLL
SEC24DENSG00000150961.101053.030601570.12820-0.5763011.7314010.55570HepG2HNRNPU
SEC24DENSG00000150961.101230.741301615.24120-0.392202.334801.42590HepG2KHSRP
SEC24DENSG00000150961.101258.360401650.61200-0.391504.955203.59540HepG2KIF1C
SEC24DENSG00000150961.102575.234701863.474400.466603.001901.70240HepG2KRR1
SEC24DENSG00000150961.101745.888902555.15810-0.549504.462503.39780HepG2LARP4
SEC24DENSG00000150961.102347.122601703.748900.462104.090303.29500HepG2MAGOH
SEC24DENSG00000150961.101164.254601713.25050-0.557304.786903.97460HepG2MATR3
SEC24DENSG00000150961.101772.048902108.66540-0.250902.323001.62490HepG2NOL12
SEC24DENSG00000150961.102315.014101074.248101.1076010.012008.28880HepG2PABPC1
SEC24DENSG00000150961.102089.282401595.659700.388806.511005.64070HepG2PCBP1
SEC24DENSG00000150961.10747.511701400.42100-0.9057020.7301018.85290HepG2PPIL4
SEC24DENSG00000150961.101057.641501707.77770-0.691309.872108.54460HepG2PRPF4
SEC24DENSG00000150961.10869.048601426.05490-0.714503.818201.73600HepG2PSIP1
SEC24DENSG00000150961.101875.134001623.659200.207602.123101.63150HepG2PTBP1
SEC24DENSG00000150961.101617.937502135.27070-0.400304.877504.00060HepG2PUM2
SEC24DENSG00000150961.101347.197501839.28670-0.449208.723507.73210HepG2PUS1
SEC24DENSG00000150961.101880.023402631.98930-0.485407.313206.00950HepG2RBM15
SEC24DENSG00000150961.10967.414702370.76340-1.2931048.7000047.04380HepG2RBM22
SEC24DENSG00000150961.101005.633201507.02120-0.583606.182604.68930HepG2RBM27
SEC24DENSG00000150961.101256.335201806.96360-0.524309.575708.67830HepG2NELFE
SEC24DENSG00000150961.101396.361001682.96490-0.269303.046902.40420HepG2RECQL
SEC24DENSG00000150961.10614.542602267.54110-1.8835062.8819060.68710HepG2RPLP0
SEC24DENSG00000150961.10971.742801456.66050-0.584003.694902.60510HepG2RPS10
SEC24DENSG00000150961.10425.015801066.52440-1.3273027.8537026.24050HepG2RPS19
SEC24DENSG00000150961.10872.550801389.86760-0.671607.765306.46930HepG2RPS2
SEC24DENSG00000150961.10918.481801418.75890-0.627306.886005.20600HepG2RPS5
SEC24DENSG00000150961.101813.614901398.241800.375205.818704.93840HepG2SAFB2
SEC24DENSG00000150961.10785.645801111.27540-0.500303.394301.95340HepG2SART3
SEC24DENSG00000150961.102032.782502622.20960-0.367302.190701.58980HepG2SF3A3
SEC24DENSG00000150961.101836.524302203.13380-0.262601.910001.31660HepG2SF3B1
SEC24DENSG00000150961.101428.580201690.41040-0.242802.603302.02640HepG2SF3B4
SEC24DENSG00000150961.101057.939601630.54100-0.6241014.9966013.68210HepG2SMN1
SEC24DENSG00000150961.102394.277301511.963100.663105.581304.18540HepG2SMNDC1
SEC24DENSG00000150961.101904.153301022.856800.896402.886501.54080HepG2SNRNP200
SEC24DENSG00000150961.101340.960502451.39000-0.870307.791506.47560HepG2SNRNP70
SEC24DENSG00000150961.101608.531002677.63970-0.7352025.0255023.91170HepG2SRFBP1
SEC24DENSG00000150961.102750.976301764.434100.6406018.2019017.21300HepG2SRSF1
SEC24DENSG00000150961.10985.524502370.71700-1.2664019.5717016.79120HepG2SRSF3
SEC24DENSG00000150961.101163.751601987.51980-0.7722020.8710019.36660HepG2SRSF5
SEC24DENSG00000150961.101739.582102067.99590-0.249503.069002.34210HepG2SRSF7
SEC24DENSG00000150961.10962.111001858.34640-0.9497011.128608.81830HepG2SSRP1
SEC24DENSG00000150961.10914.870701548.33850-0.759107.396205.50850HepG2STAU1
SEC24DENSG00000150961.10441.173401026.50280-1.2183014.9972012.25940HepG2STIP1
SEC24DENSG00000150961.101755.639002260.32310-0.364506.764705.86740HepG2SUCLG1
SEC24DENSG00000150961.102076.354701565.310900.407504.542203.35230HepG2SUPT6H
SEC24DENSG00000150961.10883.861401544.11980-0.804908.587707.50400HepG2SUPV3L1
SEC24DENSG00000150961.10966.004801585.97430-0.7153014.3599013.22880HepG2TAF15
SEC24DENSG00000150961.101789.630501457.260200.296302.791201.95150HepG2TIA1
SEC24DENSG00000150961.10865.498401525.50210-0.8177015.8814014.86100HepG2TIAL1
SEC24DENSG00000150961.101979.007801539.322400.362405.574504.82650HepG2TRIM56
SEC24DENSG00000150961.10425.18390912.17170-1.1012014.9754013.24680HepG2UCHL5
SEC24DENSG00000150961.10954.759501413.98960-0.566603.354002.24410HepG2UPF2
SEC24DENSG00000150961.101956.395802390.28580-0.289003.742902.54310HepG2UTP18
SEC24DENSG00000150961.101327.958902245.17770-0.7576022.1178020.66330HepG2UTP3
SEC24DENSG00000150961.10681.815501057.01060-0.632504.603903.17480HepG2XPO5
SEC24DENSG00000150961.10811.071701520.01600-0.9062012.1391010.64510HepG2XRN2
SEC24DENSG00000150961.101165.127501685.44540-0.532606.438905.48430HepG2ZC3H8
SEC24DENSG00000150961.103468.021302557.603600.4392013.2510012.27860HepG2ZNF622
SEC24DENSG00000150961.101093.432301481.54500-0.438202.657001.39050HepG2ZRANB2
SEC24DENSG00000150961.103752.771204297.58530-0.195602.433001.89550K562AGGF1
SEC24DENSG00000150961.101412.77020943.040100.583005.407903.35120K562BUD13
SEC24DENSG00000150961.103846.709405135.78300-0.417006.057204.28440K562CCDC124
SEC24DENSG00000150961.102559.034701743.466700.553505.200903.14590K562CKAP4
SEC24DENSG00000150961.101872.099501302.882700.522807.107005.84260K562CPSF6
SEC24DENSG00000150961.103312.651902612.022400.342705.521502.99050K562DDX24
SEC24DENSG00000150961.101116.301802259.96830-1.017605.691104.80690K562DDX47
SEC24DENSG00000150961.101604.52770979.812400.711508.820707.10080K562EFTUD2
SEC24DENSG00000150961.101481.20290887.873300.7382014.9541013.48440K562EIF2S2
SEC24DENSG00000150961.10740.273801100.90100-0.572603.048701.98730K562EIF3A
SEC24DENSG00000150961.101535.329201048.793700.549704.162602.86310K562EIF3D
SEC24DENSG00000150961.10622.215301314.36620-1.0789015.9239013.95410K562EIF3G
SEC24DENSG00000150961.101654.450802665.15070-0.687902.624001.70670K562EIF4G2
SEC24DENSG00000150961.101233.14770872.495800.499003.421901.47620K562FAM120A
SEC24DENSG00000150961.101989.272301406.153500.500405.801903.39890K562FASTKD2
SEC24DENSG00000150961.101238.16250973.216700.347302.632801.80590K562FIP1L1
SEC24DENSG00000150961.101709.125801325.708000.366403.025102.12850K562FMR1
SEC24DENSG00000150961.101453.900601123.681300.371602.749701.83790K562FTO
SEC24DENSG00000150961.102085.510201161.936200.843808.272805.83360K562FUS
SEC24DENSG00000150961.10833.171102678.42980-1.6847049.0440046.68200K562FXR1
SEC24DENSG00000150961.102252.222101243.909400.8564015.7311013.79940K562GPKOW
SEC24DENSG00000150961.101485.687001183.087800.328502.320401.62540K562GRSF1
SEC24DENSG00000150961.101436.963601770.68680-0.301302.724001.65950K562HNRNPA1
SEC24DENSG00000150961.101153.555301559.69140-0.435204.585003.83460K562HNRNPC
SEC24DENSG00000150961.101762.094602689.51790-0.610107.161305.09410K562HNRNPK
SEC24DENSG00000150961.101750.183301319.474300.407403.643902.73480K562HSPD1
SEC24DENSG00000150961.101819.171102723.02390-0.581905.967003.21770K562KHSRP
SEC24DENSG00000150961.102184.895401062.203801.0404013.0939010.93300K562KRR1
SEC24DENSG00000150961.102189.806601510.664200.535506.543504.28410K562LARP7
SEC24DENSG00000150961.101742.568901390.987500.325002.878101.31870K562LSM11
SEC24DENSG00000150961.101927.994302829.88310-0.553608.307906.81530K562MAGOH
SEC24DENSG00000150961.101969.711502824.25180-0.519907.670806.03730K562MATR3
SEC24DENSG00000150961.101739.601701214.204100.518606.257304.91020K562METAP2
SEC24DENSG00000150961.102284.841401958.054800.222603.478402.65130K562NSUN2
SEC24DENSG00000150961.103185.566602164.145600.557703.326201.95160K562PABPC1
SEC24DENSG00000150961.101299.264501654.09030-0.348302.380501.61040K562PCBP3
SEC24DENSG00000150961.10897.514601268.74380-0.499405.944204.77490K562POLR2G
SEC24DENSG00000150961.101540.531001104.794500.479504.648703.54660K562PPIG
SEC24DENSG00000150961.101682.272501398.455100.266502.329201.50530K562PSIP1
SEC24DENSG00000150961.101882.627502749.35470-0.546308.621807.49200K562PTBP1
SEC24DENSG00000150961.101993.825402636.69690-0.403204.096003.05170K562RBM22
SEC24DENSG00000150961.101792.946301276.045800.490606.069504.59930K562RCC2
SEC24DENSG00000150961.101438.561002774.60960-0.9477013.8333011.42040K562NELFE
SEC24DENSG00000150961.101448.05630971.014900.576502.975802.12820K562RPS19
SEC24DENSG00000150961.101478.597602522.52040-0.770607.401805.65740K562RPS3
SEC24DENSG00000150961.10801.094701130.48090-0.496905.008303.54990K562SAFB
SEC24DENSG00000150961.10889.625301168.78640-0.393703.189701.63140K562SDAD1
SEC24DENSG00000150961.102528.466501932.329900.387802.029001.32300K562SF3A3
SEC24DENSG00000150961.101855.451002566.18760-0.467907.066405.66120K562SF3B4
SEC24DENSG00000150961.101758.666801206.961300.543003.483401.66120K562SND1
SEC24DENSG00000150961.101715.585601209.643200.504005.303703.74600K562SRFBP1
SEC24DENSG00000150961.101988.214301545.708600.363105.341703.69380K562SRSF7
SEC24DENSG00000150961.101714.495401355.745200.338603.429001.98000K562SSB
SEC24DENSG00000150961.101774.321601167.908700.603206.459204.47000K562STAU1
SEC24DENSG00000150961.101413.55010922.798200.615105.535204.06210K562SUPV3L1
SEC24DENSG00000150961.10764.397501272.58290-0.7354011.7461010.06150K562SYNCRIP
SEC24DENSG00000150961.102174.623102727.89600-0.327002.664101.96790K562TARDBP
SEC24DENSG00000150961.102206.869701429.108400.626808.945207.02980K562TRIM56
SEC24DENSG00000150961.101493.752301138.461400.391803.198501.68190K562TRIP6
SEC24DENSG00000150961.102698.681201503.676700.8437014.9397012.11210K562TROVE2
SEC24DENSG00000150961.101732.57130976.855500.8266011.147809.05290K562UCHL5
SEC24DENSG00000150961.103622.077602076.179300.8028031.9268029.80240K562UPF1
SEC24DENSG00000150961.101295.003301847.49200-0.512608.683607.26850K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SEC24D is not available on ENCORE database.





6 RBPs can affect the splicing of SEC24D :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESEC24DENSG00000150961.10chr4-1196876831196879781196859561196860721196893271196894660.064000.000200.00543includedK562SF3B4
SESEC24DENSG00000150961.10chr4-1196575221196577241196538871196540671196594151196595340.057000.000360.03853includedHepG2PRPF8
SESEC24DENSG00000150961.10chr4-1196876831196879781196859561196860721196893271196894660.197000.000000.00000includedHepG2HNRNPK
SESEC24DENSG00000150961.10chr4-1196568811196577241196538871196540671196594151196596250.051000.000000.00006includedK562AQR
SESEC24DENSG00000150961.10chr4-1196876831196879781196859561196860721196893271196894660.062000.000190.00304includedK562AQR
SESEC24DENSG00000150961.10chr4-119660303119660442119659415119659534119661817119661963-0.064000.000340.00487excludedK562AQR
SESEC24DENSG00000150961.10chr4-1196876831196879781196859561196860721196893271196894660.075000.000050.00608includedHepG2HNRNPL
SESEC24DENSG00000150961.10chr4-1196876831196879781196859561196860721196893271196894660.152000.000000.00000includedK562HNRNPK
A3SSSEC24DENSG00000150961.10chr4-119736182119736313119736182119736310119736605119736703-0.216000.000000.00396shorterK562PPIL4
A3SSSEC24DENSG00000150961.10chr4-1196620951196622651196620951196621921196651421196653130.051000.000010.00013longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SEC24D is not avaliable on ENCORE database.