PSMG1

General Information

Gene Name : PSMG1
Gene ID : ENSG00000183527.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PSMG1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PSMG1	ENSG00000183527.11	115.77	103.90	109.84	ENCSR000AEF
HepG2	PSMG1	ENSG00000183527.11	87.83	165.10	126.47	ENCSR985KAT
K562	PSMG1	ENSG00000183527.11	274.45	287.27	280.86	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PSMG1 is not avaliable on ENCORE database.

Proteins bound to RNA

PSMG1 RNA is bound by 13 proteins.

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eCLIP assay for PSMG1 is not avaliable on ENCORE database.

13 proteins are bound to PSMG1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr21	40555242	40555302	-	CDS,intron-Distal,intron-Proximal	4.31675	23.34025	K562	DDX3X
chr21	40549396	40549432	-	3'-UTR,CDS,intron-Distal	4.07911	18.99259	K562	YBX3
chr21	40555302	40555384	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.48288	16.69708	K562	DDX3X
chr21	40552318	40552362	-	5'-UTR,CDS,intron-Distal	3.18018	14.87462	K562	YBX3
chr21	40549432	40549450	-	3'-UTR,CDS,intron-Distal	3.74656	14.61843	K562	YBX3
chr21	40549326	40549390	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.70757	13.78100	HepG2	PRPF8
chr21	40550453	40550533	-	3'-UTR,CDS,intron-Distal	3.32069	12.30222	K562	YBX3
chr21	40552294	40552318	-	5'-UTR,CDS,intron-Distal	3.85877	12.26025	K562	YBX3
chr21	40552248	40552294	-	5'-UTR,CDS,intron-Distal	4.48910	11.40770	K562	YBX3
chr21	40553916	40554056	-	intron-Distal	4.39876	11.34175	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 30 entries

eCLIP assay for PSMG1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PSMG1 is not available on ENCORE database.
116 RBPs can affect the levels of PSMG1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PSMG1 is not available on ENCORE database.

116 RBPs can affect the gene expression of PSMG1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PSMG1	ENSG00000183527.7	2535.36170	1423.97300	0.83220	23.76630	22.10920	K562	FXR1
PSMG1	ENSG00000183527.7	5214.99950	3460.22730	0.59170	18.45170	16.90710	K562	DDX47
PSMG1	ENSG00000183527.7	1917.36410	2706.64320	-0.49740	16.05460	14.46220	K562	NSUN2
PSMG1	ENSG00000183527.7	1048.27320	1856.41360	-0.82450	15.10330	13.79420	K562	HNRNPC
PSMG1	ENSG00000183527.7	530.79420	924.68790	-0.80080	14.50830	13.13310	HepG2	SRSF7
PSMG1	ENSG00000183527.7	532.22550	1013.91230	-0.92980	13.07290	11.78640	HepG2	RPLP0
PSMG1	ENSG00000183527.7	1496.66640	2455.69190	-0.71440	13.05580	11.10610	K562	WDR3
PSMG1	ENSG00000183527.7	2019.88430	2869.91190	-0.50670	12.41630	11.03180	K562	UPF1
PSMG1	ENSG00000183527.7	573.74840	941.18340	-0.71410	12.02240	10.67030	HepG2	HNRNPF
PSMG1	ENSG00000183527.7	324.69130	640.83840	-0.98090	11.52260	10.62680	HepG2	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 149 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PSMG1 is not available on ENCORE database.

27 RBPs can affect the splicing of PSMG1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	PSMG1	ENSG00000183527.7	chr21	-	40551849	40551912	40550374	40550573	40552210	40552362	0.11900	0.00000	included	K562	SRSF1
SE	PSMG1	ENSG00000183527.7	chr21	-	40551849	40551912	40550374	40550573	40552210	40552332	-0.42400	0.00000	excluded	K562	SF3B4
SE	PSMG1	ENSG00000183527.7	chr21	-	40551849	40551912	40550374	40550573	40552210	40552362	0.14700	0.00001	included	HepG2	U2AF1
SE	PSMG1	ENSG00000183527.7	chr21	-	40551849	40551912	40550374	40550573	40552210	40552332	0.11500	0.00067	included	K562	ABCF1
SE	PSMG1	ENSG00000183527.7	chr21	-	40551849	40551912	40550374	40550573	40552210	40552362	0.11300	0.00033	included	HepG2	SFPQ
SE	PSMG1	ENSG00000183527.7	chr21	-	40551849	40551912	40550374	40550573	40552210	40552362	-0.17000	0.00008	excluded	K562	EFTUD2
SE	PSMG1	ENSG00000183527.7	chr21	-	40551849	40551912	40550374	40550573	40552210	40552362	0.13500	0.00010	included	K562	U2AF1
SE	PSMG1	ENSG00000183527.7	chr21	-	40551849	40551912	40550374	40550573	40552210	40552362	-0.40500	0.00000	excluded	HepG2	SF3A3
SE	PSMG1	ENSG00000183527.7	chr21	-	40551849	40551912	40550374	40550573	40552210	40552362	-0.31500	0.00000	excluded	HepG2	SF3B4
SE	PSMG1	ENSG00000183527.7	chr21	-	40551849	40551912	40550374	40550573	40552210	40552362	0.13300	0.00017	included	K562	U2AF2

Showing 1 to 10 of 37 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PSMG1

General Information

Functions

Localization

Domains (AlphaFold: PSMG1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PSMG1 is not avaliable on ENCORE database.

13 proteins are bound to PSMG1 RNA:

eCLIP assay for PSMG1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PSMG1 is not available on ENCORE database.

116 RBPs can affect the gene expression of PSMG1 :

The Knockdown/knockout RNA-Seq assay for PSMG1 is not available on ENCORE database.

27 RBPs can affect the splicing of PSMG1 :

The Knockdown/knockout RNA-Seq assay for PSMG1 is not avaliable on ENCORE database.