PRMT7

General Information

Gene Name : PRMT7
Gene ID : ENSG00000132600.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PRMT7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PRMT7	ENSG00000132600.16	18.03	29.44	23.73	ENCSR000AEF
HepG2	PRMT7	ENSG00000132600.16	55.65	54.55	55.10	ENCSR985KAT
K562	PRMT7	ENSG00000132600.16	48.12	57.80	52.96	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PRMT7 is not avaliable on ENCORE database.

Proteins bound to RNA

PRMT7 RNA is bound by 32 proteins.

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eCLIP assay for PRMT7 is not avaliable on ENCORE database.

32 proteins are bound to PRMT7 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	68391251	68391386	+	3'-UTR	5.62185	22.77223	HepG2	XPO5
chr16	68355544	68355688	+	intron-Distal	4.24752	19.24001	K562	KHSRP
chr16	68387444	68387510	+	3'-UTR,CDS,intron-Proximal	4.14907	14.90184	HepG2	PRPF8
chr16	68371468	68371514	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.48151	14.23871	HepG2	PRPF8
chr16	68389773	68389869	+	3'-UTR,CDS,intron-Proximal	5.72675	13.82964	HepG2	EFTUD2
chr16	68386085	68386189	+	CDS,intron-Proximal	3.87879	12.03921	K562	SF3B4
chr16	68389787	68389917	+	intron-Distal,intron-Proximal	3.87823	11.26073	HepG2	PRPF8
chr16	68363041	68363078	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.28139	11.21209	HepG2	BCLAF1
chr16	68382341	68382399	+	intron-Distal,intron-Proximal	4.95511	11.12698	K562	AQR
chr16	68363049	68363108	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.97619	11.12141	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 96 entries

eCLIP assay for PRMT7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PRMT7 is not available on ENCORE database.
51 RBPs can affect the levels of PRMT7.

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The Knockdown/knockout RNA-Seq assay for PRMT7 is not available on ENCORE database.

51 RBPs can affect the gene expression of PRMT7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PRMT7	ENSG00000132600.12	664.44900	1061.08570	-0.67530	10.16370	9.31080	HepG2	RBM22
PRMT7	ENSG00000132600.12	1509.00980	1040.50360	0.53620	9.97390	9.11590	HepG2	SSB
PRMT7	ENSG00000132600.12	712.43620	416.48430	0.77440	9.68020	8.84410	HepG2	TIAL1
PRMT7	ENSG00000132600.12	355.78540	707.44670	-0.99160	9.14420	8.23980	HepG2	AKAP1
PRMT7	ENSG00000132600.12	937.54050	635.29850	0.56130	7.81980	7.11860	HepG2	SRSF1
PRMT7	ENSG00000132600.12	661.71920	428.59050	0.62650	7.89870	6.91410	HepG2	HNRNPU
PRMT7	ENSG00000132600.12	1039.12000	704.52630	0.56050	7.68230	6.74150	K562	FXR1
PRMT7	ENSG00000132600.12	170.75900	363.97320	-1.09190	7.85390	6.53620	K562	G3BP2
PRMT7	ENSG00000132600.12	1494.77580	856.11110	0.80400	7.31350	6.17900	HepG2	SF3A3
PRMT7	ENSG00000132600.12	928.54560	614.82290	0.59470	6.69560	5.36220	K562	MAGOH
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 60 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PRMT7 is not available on ENCORE database.

21 RBPs can affect the splicing of PRMT7 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PRMT7	ENSG00000132600.12	chr16	+	68390603	68390700			68389625	68389786	68390956	68391162	-0.38300	0.00000	0.00011	excluded	HepG2	U2AF1
SE	PRMT7	ENSG00000132600.12	chr16	+	68355328	68355365			68349799	68349977	68358585	68358693	-0.19100	0.00000	0.00291	excluded	K562	BUD13
SE	PRMT7	ENSG00000132600.12	chr16	+	68355328	68355365			68349799	68349977	68358585	68358693	0.14900	0.00007	0.00597	included	HepG2	SFPQ
SE	PRMT7	ENSG00000132600.12	chr16	+	68390603	68390700			68389600	68389786	68390956	68391152	-0.13300	0.00008	0.00141	excluded	K562	AQR
SE	PRMT7	ENSG00000132600.12	chr16	+	68390043	68390118			68389625	68389786	68390603	68390700	-0.23000	0.00008	0.00219	excluded	K562	HNRNPC
SE	PRMT7	ENSG00000132600.12	chr16	+	68345944	68346079			68344876	68345002	68349799	68349977	0.43000	0.00010	0.00607	included	HepG2	HNRNPC
MXE	PRMT7	ENSG00000132600.12	chr16	+	68345944	68346079	68349799	68349977	68344876	68345002	68355328	68355365	0.12800	0.00017	0.00663	1included	K562	SUPV3L1
SE	PRMT7	ENSG00000132600.12	chr16	+	68382244	68382334			68380047	68380183	68386150	68386312	-0.26700	0.00025	0.00996	excluded	HepG2	SF3A3
SE	PRMT7	ENSG00000132600.12	chr16	+	68390043	68390118			68389625	68389786	68390603	68390700	0.16500	0.00035	0.06390	included	K562	MTPAP
SE	PRMT7	ENSG00000132600.12	chr16	+	68355328	68355365			68349799	68349977	68358585	68358693	0.14000	0.00037	0.05809	included	K562	DROSHA

Showing 1 to 10 of 31 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PRMT7

General Information

Functions

Localization

Domains (AlphaFold: PRMT7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PRMT7 is not avaliable on ENCORE database.

32 proteins are bound to PRMT7 RNA:

eCLIP assay for PRMT7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PRMT7 is not available on ENCORE database.

51 RBPs can affect the gene expression of PRMT7 :

The Knockdown/knockout RNA-Seq assay for PRMT7 is not available on ENCORE database.

21 RBPs can affect the splicing of PRMT7 :

The Knockdown/knockout RNA-Seq assay for PRMT7 is not avaliable on ENCORE database.