PHYH

General Information

Gene Name : PHYH
Gene ID : ENSG00000107537.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PHYH)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PHYH	ENSG00000107537.13	2.89	3.56	3.23	ENCSR000AEF
HepG2	PHYH	ENSG00000107537.13	19.73	26.36	23.05	ENCSR985KAT
K562	PHYH	ENSG00000107537.13	4.17	4.38	4.28	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PHYH is not avaliable on ENCORE database.

Proteins bound to RNA

PHYH RNA is bound by 5 proteins.

CanvasJS.com

eCLIP assay for PHYH is not avaliable on ENCORE database.

5 proteins are bound to PHYH RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	13341999	13342086	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.11645	8.30191	HepG2	DDX3X
chr10	13333826	13333875	-	CDS,intron-Distal,intron-Proximal	4.65084	5.23259	HepG2	BCLAF1
chr10	13322975	13323082	-	CDS,intron-Distal,intron-Proximal	4.18504	4.28220	HepG2	GRWD1
chr10	13337457	13337526	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.02274	4.02817	HepG2	PRPF8
chr10	13336485	13336588	-	5'-UTR,CDS,intron-Distal	3.28786	3.47314	HepG2	G3BP1
chr10	13320255	13320339	-	3'-UTR,CDS,intron-Distal	3.97447	3.36483	HepG2	G3BP1
chr10	13333875	13333912	-	CDS,intron-Distal	3.42259	3.27569	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 7 of 7 entries

eCLIP assay for PHYH is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PHYH is not available on ENCORE database.
119 RBPs can affect the levels of PHYH.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PHYH is not available on ENCORE database.

119 RBPs can affect the gene expression of PHYH :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PHYH	ENSG00000107537.9	4310.42380	1118.72400	1.94590	166.43770	164.18750	HepG2	SSB
PHYH	ENSG00000107537.9	736.76240	2954.31320	-2.00360	133.33470	130.43940	HepG2	SF3B4
PHYH	ENSG00000107537.9	882.72640	2788.64880	-1.65950	97.40010	94.77370	HepG2	PCBP1
PHYH	ENSG00000107537.9	911.54300	2837.48420	-1.63820	92.87750	90.82020	HepG2	PTBP1
PHYH	ENSG00000107537.9	897.77130	2508.63840	-1.48250	81.45390	79.33220	HepG2	SRSF9
PHYH	ENSG00000107537.9	1174.77640	3157.90590	-1.42660	76.22400	74.36100	HepG2	NELFE
PHYH	ENSG00000107537.9	1208.04920	3083.61200	-1.35190	75.00660	73.31990	HepG2	SRSF1
PHYH	ENSG00000107537.9	1172.70710	2941.05430	-1.32650	67.24140	65.06670	HepG2	RECQL
PHYH	ENSG00000107537.9	434.97020	1273.93540	-1.55030	54.17490	52.05380	HepG2	UTP3
PHYH	ENSG00000107537.9	735.76470	3054.08060	-2.05340	49.69620	47.20710	HepG2	FXR1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 125 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PHYH is not available on ENCORE database.

6 RBPs can affect the splicing of PHYH :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
MXE	PHYH	ENSG00000107537.9	chr10	-	13333830	13333912	13336427	13336596	13330359	13330541	13337495	13337606	-0.25600	0.00000	0.00027	2included	HepG2	HNRNPUL1
MXE	PHYH	ENSG00000107537.9	chr10	-	13330359	13330541	13333830	13333912	13325689	13325839	13336427	13336596	-0.09500	0.00008	0.00536	2included	HepG2	RBFOX2
MXE	PHYH	ENSG00000107537.9	chr10	-	13330359	13330541	13333830	13333912	13325689	13325839	13336427	13336596	0.11700	0.00049	0.06049	1included	HepG2	XRCC6
MXE	PHYH	ENSG00000107537.9	chr10	-	13336427	13336596	13337495	13337606	13333824	13333912	13340186	13340241	-0.12000	0.00054	0.04340	2included	HepG2	G3BP1
SE	PHYH	ENSG00000107537.9	chr10	-	13333830	13333912			13325689	13325839	13336427	13336596	-0.08600	0.00190	0.04233	excluded	HepG2	SRSF1
SE	PHYH	ENSG00000107537.9	chr10	-	13330359	13330541			13325689	13325839	13336427	13336596	-0.12200	0.00311	0.05209	excluded	HepG2	U2AF1

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PHYH

General Information

Functions

Localization

Domains (AlphaFold: PHYH)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PHYH is not avaliable on ENCORE database.

5 proteins are bound to PHYH RNA:

eCLIP assay for PHYH is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PHYH is not available on ENCORE database.

119 RBPs can affect the gene expression of PHYH :

The Knockdown/knockout RNA-Seq assay for PHYH is not available on ENCORE database.

6 RBPs can affect the splicing of PHYH :

The Knockdown/knockout RNA-Seq assay for PHYH is not avaliable on ENCORE database.