PFKP

General Information

Gene Name : PFKP
Gene ID : ENSG00000067057.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PFKP)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PFKP	ENSG00000067057.16	39.36	42.04	40.70	ENCSR000AEF
HepG2	PFKP	ENSG00000067057.16	3.81	3.74	3.78	ENCSR985KAT
K562	PFKP	ENSG00000067057.16	52.23	38.63	45.43	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PFKP is not avaliable on ENCORE database.

Proteins bound to RNA

PFKP RNA is bound by 37 proteins.

CanvasJS.com

eCLIP assay for PFKP is not avaliable on ENCORE database.

37 proteins are bound to PFKP RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	3142278	3142340	+	intron-Distal	7.39867	33.47125	K562	EIF4G2
chr10	3172138	3172170	+	CDS	5.77009	32.17999	K562	LIN28B
chr10	3162568	3162632	+	intron-Distal	6.63634	29.82031	K562	TARDBP
chr10	3142084	3142229	+	intron-Distal	5.52130	25.78043	K562	TARDBP
chr10	3146141	3146180	+	intron-Proximal	4.81288	24.37808	K562	AQR
chr10	3153141	3153251	+	intron-Distal	6.32426	24.22342	K562	TARDBP
chr10	3153550	3153615	+	intron-Distal	6.89337	23.99708	K562	EIF4G2
chr10	3153327	3153413	+	intron-Distal	6.34505	23.53603	K562	TARDBP
chr10	3172170	3172177	+	CDS,intron-Proximal	6.20782	23.06933	K562	LIN28B
chr10	3162130	3162146	+	CDS,intron-Distal	4.47861	21.76828	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 147 entries

eCLIP assay for PFKP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PFKP is not available on ENCORE database.
106 RBPs can affect the levels of PFKP.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PFKP is not available on ENCORE database.

106 RBPs can affect the gene expression of PFKP :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PFKP	ENSG00000067057.12	971.87030	3089.62100	-1.66860	52.17820	49.51270	K562	HSPD1
PFKP	ENSG00000067057.12	340.77320	25.59000	3.73510	44.86550	42.82940	HepG2	DDX6
PFKP	ENSG00000067057.12	227.50260	22.76030	3.32120	40.71660	39.09270	HepG2	SRSF9
PFKP	ENSG00000067057.12	301.25140	68.87910	2.12870	26.98150	25.83520	HepG2	SRFBP1
PFKP	ENSG00000067057.12	912.14290	1886.30990	-1.04820	23.34140	21.69080	K562	HNRNPC
PFKP	ENSG00000067057.12	375.44880	67.15690	2.48290	19.33540	17.55990	HepG2	DDX55
PFKP	ENSG00000067057.12	255.64730	68.59380	1.89790	18.54460	16.66250	HepG2	RBM15
PFKP	ENSG00000067057.12	2714.51760	1374.53170	0.98170	18.18680	16.39940	K562	SRSF1
PFKP	ENSG00000067057.12	1938.31970	3512.81250	-0.85780	15.43350	14.20080	K562	AQR
PFKP	ENSG00000067057.12	265.03550	57.78090	2.19740	15.66560	14.08480	HepG2	FIP1L1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 124 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PFKP is not available on ENCORE database.

2 RBPs can affect the splicing of PFKP :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	PFKP	ENSG00000067057.12	chr10	+	3141815	3142011			3141466	3141544	3143556	3143746	0.36100	0.00022	0.01158	included	K562	TARDBP
MXE	PFKP	ENSG00000067057.12	chr10	+	3145970	3146136	3147306	3147351	3143556	3143746	3147584	3147693	0.24400	0.00417	0.05669	1included	K562	SF3B4

Showing 1 to 2 of 2 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PFKP

General Information

Functions

Localization

Domains (AlphaFold: PFKP)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PFKP is not avaliable on ENCORE database.

37 proteins are bound to PFKP RNA:

eCLIP assay for PFKP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PFKP is not available on ENCORE database.

106 RBPs can affect the gene expression of PFKP :

The Knockdown/knockout RNA-Seq assay for PFKP is not available on ENCORE database.

2 RBPs can affect the splicing of PFKP :

The Knockdown/knockout RNA-Seq assay for PFKP is not avaliable on ENCORE database.