NISCH

General Information

Gene Name       : NISCH
Gene ID             : ENSG00000010322.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NISCH)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NISCHENSG00000010322.1512.1517.0314.59ENCSR000AEF
HepG2NISCHENSG00000010322.1534.4218.6426.53ENCSR985KAT
K562NISCHENSG00000010322.1520.4315.7518.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NISCH is not avaliable on ENCORE database.



Proteins bound to RNA
  • NISCH RNA is bound by 31 proteins.  







eCLIP assay for NISCH is not avaliable on ENCORE database.





31 proteins are bound to NISCH RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr35251567652515717+3'-UTR,intron-Distal3.566173.12654K562SLTM
chr35251492752515076+3'-UTR,intron-Distal,intron-Proximal3.963426.42088HepG2SRSF1
chr35251488652514968+3'-UTR,CDS,intron-Distal,intron-Proximal3.324269.94493HepG2PPIG
chr35252688952527032+3'-UTR3.571939.83843HepG2ZC3H11A
chr35251592452515999+3'-UTR,intron-Distal,polyA_site4.095253.29239HepG2CSTF2
chr35251468452514735+3'-UTR,intron-Distal5.523027.29411HepG2XPO5
chr35251454452514636+3'-UTR,intron-Distal3.3985611.07305HepG2XPO5
chr35252685052526950+3'-UTR3.532588.92128HepG2LSM11
chr35252661152526717+3'-UTR4.229453.88553HepG2ZC3H11A
chr35252682652526918+3'-UTR3.236893.18660HepG2PABPN1
chr35251376252513830+CDS,intron-Proximal4.490985.68490K562SRSF1
chr35251252652512591+CDS3.198835.59833HepG2GRWD1
chr35251057552510615+CDS3.309433.91614K562BUD13
chr35252591452525981+CDS3.889739.24553HepG2PPIG
chr35248966652489744+CDS4.460266.11036HepG2XPO5
chr35251442452514506+CDS,intron-Distal3.617235.76899HepG2EFTUD2
chr35252639352526495+CDS4.898578.32506HepG2EIF3H
chr35252142852521642+CDS3.473478.52291HepG2G3BP1
chr35251054452510604+CDS3.247106.27819HepG2PPIG
chr35251980352519845+CDS,intron-Proximal4.064987.83545HepG2PPIG
chr35251435852514437+CDS,intron-Distal,intron-Proximal3.455393.77433K562XRN2
chr35252150752521642+CDS3.806146.71596K562UCHL5
chr35252152652521633+CDS5.5419513.17563HepG2BUD13
chr35251376452513805+CDS,intron-Proximal3.413634.56058HepG2BCLAF1
chr35252195352521998+CDS3.366184.36388HepG2EIF3H
chr35252147252521574+CDS3.445848.77723HepG2PPIG
chr35252153552521630+CDS4.701028.98329HepG2EIF3H
chr35252157452521631+CDS4.2055312.18291HepG2PPIG
chr35252147652521553+CDS4.722854.15208K562RBM15
chr35251246952512507+CDS3.884415.80295HepG2PPIG
chr35251376652513812+CDS4.381553.59941K562UCHL5
chr35252592152525975+CDS3.335343.63043HepG2GRWD1
chr35252368852523716+CDS,intron-Proximal3.773998.16617HepG2PRPF8
chr35252403752524109+CDS,intron-Distal,intron-Proximal4.5152210.14692HepG2SF3B4
chr35250784252507908+CDS,intron-Proximal3.962115.35619K562AQR
chr35250487852504923+CDS4.354969.28243HepG2PPIG
chr35250633252506395+CDS4.057966.28735K562DDX24
chr35251862552518653+CDS4.476296.92541HepG2PPIG
chr35252121152521223+CDS,intron-Proximal4.173686.64430HepG2PPIG
chr35252191552522001+CDS5.4215510.03208K562RBM15
chr35251254252512598+CDS,intron-Proximal3.997293.80401K562SRSF1
chr35251253352512594+CDS,intron-Proximal3.2987811.02664HepG2PPIG
chr35250583752505868+CDS3.788643.38114HepG2GRWD1
chr35251431052514386+CDS,intron-Proximal3.220376.62672K562AQR
chr35252588952525910+CDS4.754995.26450HepG2EIF3H
chr35252258652522620+CDS3.446824.51003HepG2PPIG
chr35251421252514281+CDS3.507033.43213K562UCHL5
chr35251160852511658+CDS4.498699.88154HepG2PPIG
chr35251253352512599+CDS,intron-Proximal3.103373.89662K562BUD13
chr35251255452512593+CDS3.539705.21950K562DDX24
chr35250582952505877+CDS,intron-Proximal3.871479.24553HepG2PPIG
chr35252482452524887+CDS,intron-Proximal3.9391910.48654HepG2PRPF8
chr35252404552524113+CDS,intron-Distal,intron-Proximal4.111129.19628HepG2BUD13
chr35252350452523550+CDS3.912383.48187K562RBM15
chr35252240852522455+CDS4.697544.82934K562RBM15
chr35251979352519803+CDS,intron-Proximal3.903394.96634HepG2PPIG
chr35251434552514403+CDS,intron-Proximal3.480036.22359HepG2BUD13
chr35252250452522622+CDS,intron-Proximal3.193495.68066HepG2EIF3H
chr35252178852521835+CDS4.881686.89039K562RBM15
chr35251433452514426+CDS,intron-Distal,intron-Proximal3.289119.03223K562BUD13
chr35249275452492814+CDS3.859825.36555HepG2BCLAF1
chr35250638852506414+CDS3.287864.85828HepG2BCLAF1
chr35252146852521616+CDS4.301549.30176HepG2PABPN1
chr35251376352513804+CDS,intron-Proximal3.9976612.11762HepG2PPIG
chr35250487652504923+CDS3.054104.61799HepG2BCLAF1
chr35251629052516347+intron-Distal4.0565814.55041HepG2XPO5
chr35251724052517315+intron-Distal4.542854.86913K562XRN2
chr35251733352517402+intron-Distal3.331943.95434K562HNRNPM
chr35252448252524529+intron-Distal3.962777.65197HepG2NOLC1
chr35251644052516483+intron-Distal3.530754.71060K562BUD13
chr35252424852524332+intron-Distal,intron-Proximal5.360597.81430K562AQR
chr35251760452517698+intron-Distal3.570405.05783K562AATF
chr35251788652517928+intron-Distal3.387858.15194HepG2RBFOX2
chr35251638852516491+intron-Distal3.756508.23920K562HNRNPM
chr35251733352517431+intron-Distal3.6517217.91582HepG2RBFOX2
chr35251726952517331+intron-Distal4.3069915.45783HepG2RBFOX2
chr35251734452517407+intron-Distal3.926896.15196HepG2HNRNPM
chr35251720152517271+intron-Distal4.8994312.14391K562RBFOX2
chr35251756752517675+intron-Distal4.140676.63007K562TAF15
chr35251721252517262+intron-Distal4.509457.94355HepG2HNRNPM
chr35251714452517207+intron-Distal5.4842434.20554HepG2RBFOX2
chr35251720752517269+intron-Distal4.9994733.59373HepG2RBFOX2
chr35251621952516274+intron-Distal3.035405.99636HepG2HNRNPC
chr35251622352516270+intron-Distal3.530554.81774K562HNRNPM
chr35251679752516865+intron-Distal3.660378.54522K562RBFOX2
chr35251714352517201+intron-Distal4.8453112.79200K562RBFOX2
chr35251762552517661+intron-Distal3.476577.29598HepG2RBFOX2
chr35251721052517256+intron-Distal3.745784.08493K562HNRNPM
chr35251704752517129+intron-Distal4.007939.38691K562RBFOX2
chr35251679952516884+intron-Distal4.7605135.03601HepG2RBFOX2
chr35251707552517144+intron-Distal4.8479321.84585HepG2RBFOX2
chr35252375852523834+intron-Distal,intron-Proximal3.744713.21539HepG2SRSF1
chr35249002052490076+intron-Distal3.753703.39593HepG2PRPF4
chr35251717952517238+intron-Distal3.289086.12763K562DROSHA
chr35251643452516482+intron-Distal3.894204.96047K562SLTM
chr35251691352517010+intron-Distal3.1572524.55284HepG2RBFOX2
chr35251758352517625+intron-Distal3.098385.87674HepG2RBFOX2
chr35251701052517045+intron-Distal3.755259.81568HepG2RBFOX2
chr35251735852517432+intron-Distal3.045034.69666K562RBFOX2
chr35252371652523741+intron-Proximal3.653018.47339HepG2PRPF8
chr35251259352512605+intron-Proximal4.784594.65563K562AQR
chr35252530652525364+intron-Proximal4.2477210.56933HepG2SF3A3
chr35251260552512635+intron-Proximal4.860594.65563K562AQR
chr35252489552524919+intron-Proximal4.410755.39405HepG2RBM22
chr35251149952511573+intron-Proximal4.052263.56713HepG2SF3B4
chr35252487752524895+intron-Proximal3.793724.58630HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NISCH is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NISCH is not available on ENCORE database.

  • 77 RBPs can affect the levels of NISCH.  








The Knockdown/knockout RNA-Seq assay for NISCH is not available on ENCORE database.





77 RBPs can affect the gene expression of NISCH :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NISCHENSG00000010322.112300.009301753.865800.391007.588306.68220HepG2ACO1
NISCHENSG00000010322.112890.152602247.168700.362906.074405.11920HepG2AUH
NISCHENSG00000010322.111341.170401005.617500.415303.361902.61200HepG2CPSF6
NISCHENSG00000010322.111665.768301311.415900.345004.416403.63720HepG2CELF1
NISCHENSG00000010322.11785.877001095.84300-0.479702.260601.44530HepG2DDX24
NISCHENSG00000010322.111108.16040805.104200.460805.757004.77520HepG2DNAJC21
NISCHENSG00000010322.111210.25880798.096300.6006012.6564011.37050HepG2DNAJC2
NISCHENSG00000010322.111885.772301215.670200.633304.186103.46500HepG2EIF2S1
NISCHENSG00000010322.111979.727201308.314900.597504.368503.51510HepG2EIF4B
NISCHENSG00000010322.111920.244601356.074800.501803.488202.71700HepG2FXR1
NISCHENSG00000010322.111913.848301257.499300.605803.839903.06090HepG2G3BP1
NISCHENSG00000010322.111816.811101335.596400.443802.730801.84650HepG2G3BP2
NISCHENSG00000010322.111115.09030864.052400.367902.752301.85620HepG2GEMIN5
NISCHENSG00000010322.111452.492001139.930900.349502.213201.63760HepG2GPKOW
NISCHENSG00000010322.111570.915501207.802000.379105.193304.24840HepG2HNRNPF
NISCHENSG00000010322.112171.748801274.403400.768908.995607.79160HepG2HNRNPK
NISCHENSG00000010322.111506.547001284.437000.230002.783202.10790HepG2HNRNPL
NISCHENSG00000010322.111203.59890898.163800.422205.964105.10210HepG2HNRNPU
NISCHENSG00000010322.111509.918601189.337200.344203.295702.51070HepG2IGF2BP1
NISCHENSG00000010322.111809.800401278.057300.501803.653302.88720HepG2IGF2BP2
NISCHENSG00000010322.111173.20720917.438800.354704.069603.19770HepG2ILF2
NISCHENSG00000010322.111908.332201285.812500.569503.938302.72400HepG2KHSRP
NISCHENSG00000010322.112657.895401804.441800.558604.635503.55310HepG2LARP4
NISCHENSG00000010322.111761.194101356.552100.376502.035701.46930HepG2MAGOH
NISCHENSG00000010322.112310.480601396.017200.726808.395407.32150HepG2NCBP2
NISCHENSG00000010322.111102.68380698.245100.659104.047702.31340HepG2NOLC1
NISCHENSG00000010322.111638.904101242.714400.399102.339101.67100HepG2PABPC4
NISCHENSG00000010322.111596.707601350.685400.241302.573101.98220HepG2PCBP1
NISCHENSG00000010322.111211.36870801.084400.596509.371308.05860HepG2PPIL4
NISCHENSG00000010322.111846.145301374.403000.425606.749505.96930HepG2PTBP1
NISCHENSG00000010322.111743.199001416.880500.298904.807604.07090HepG2PUM1
NISCHENSG00000010322.112036.822101786.435700.189102.081401.52930HepG2PUS1
NISCHENSG00000010322.111981.455701488.448200.412702.718902.09930HepG2QKI
NISCHENSG00000010322.11494.120401028.34180-1.057403.546702.75110HepG2RAVER1
NISCHENSG00000010322.112491.197602156.539200.208001.942801.48850HepG2RBM22
NISCHENSG00000010322.112258.385801529.553600.5621012.1585011.17720HepG2NELFE
NISCHENSG00000010322.112046.576201424.616700.5225010.681109.59130HepG2RECQL
NISCHENSG00000010322.111196.26800944.365000.341002.807702.18880HepG2RPS19
NISCHENSG00000010322.111584.250601113.012400.509204.185003.20930HepG2RPS2
NISCHENSG00000010322.111204.44930799.834700.5905011.2362010.07590HepG2SAFB2
NISCHENSG00000010322.111686.186002115.51060-0.327201.940601.37350HepG2SF3A3
NISCHENSG00000010322.111799.555501430.876900.330604.461703.73790HepG2SF3B4
NISCHENSG00000010322.112094.455501279.818700.7105022.9523021.32210HepG2SLBP
NISCHENSG00000010322.111210.14210932.709000.375605.533004.67490HepG2SMN1
NISCHENSG00000010322.112288.349301317.860400.796008.848507.81180HepG2SRSF5
NISCHENSG00000010322.111511.438801186.635800.348904.547203.68810HepG2SRSF7
NISCHENSG00000010322.111625.151501215.099700.419407.181506.36680HepG2SRSF9
NISCHENSG00000010322.111690.881601154.632700.550203.367102.13910HepG2STIP1
NISCHENSG00000010322.112252.181401498.756400.5875016.2541014.94790HepG2SUCLG1
NISCHENSG00000010322.111408.634601060.364400.409603.505302.70020HepG2TARDBP
NISCHENSG00000010322.111416.48410872.607700.6988011.6773010.77600HepG2TIAL1
NISCHENSG00000010322.111437.49810880.543700.7070016.2638015.05230HepG2TRIM56
NISCHENSG00000010322.112000.431801303.989500.617302.361501.56080HepG2TUFM
NISCHENSG00000010322.112481.761301380.266900.846304.024103.00360HepG2UBE2L3
NISCHENSG00000010322.111079.61740591.501500.868008.982007.61170HepG2UCHL5
NISCHENSG00000010322.111493.69620985.869500.599303.007202.25160HepG2XRN2
NISCHENSG00000010322.111787.927902063.38840-0.206702.771602.22440HepG2ZNF622
NISCHENSG00000010322.112614.203602117.311700.304004.937504.21560K562AGGF1
NISCHENSG00000010322.112612.416201983.555200.397204.078603.39340K562AQR
NISCHENSG00000010322.111258.42090953.960200.399504.997103.69050K562BCLAF1
NISCHENSG00000010322.112011.619801671.251800.267302.864701.73550K562CPEB4
NISCHENSG00000010322.111027.01320723.721100.504805.716104.11920K562CSTF2
NISCHENSG00000010322.111918.439201639.414600.226702.491101.34530K562DDX21
NISCHENSG00000010322.111077.21920820.045800.393402.706201.80460K562EFTUD2
NISCHENSG00000010322.111848.013401380.113700.421106.059005.05670K562EIF2S2
NISCHENSG00000010322.111332.709501072.157900.313703.168001.91370K562EIF4B
NISCHENSG00000010322.111342.142801039.228000.368904.166702.53540K562EWSR1
NISCHENSG00000010322.11209.78160493.99050-1.235605.489704.41810K562G3BP2
NISCHENSG00000010322.11574.10380790.18430-0.460902.267101.42880K562HNRNPM
NISCHENSG00000010322.111355.21550817.086400.729902.516301.55300K562IGF2BP2
NISCHENSG00000010322.111126.10520830.780100.438702.420701.32650K562IGF2BP3
NISCHENSG00000010322.111144.53920857.965200.415702.450301.65600K562MAGOH
NISCHENSG00000010322.11865.74910697.363100.311902.058201.30160K562METAP2
NISCHENSG00000010322.11691.09710513.152700.429402.477801.67060K562SF3B4
NISCHENSG00000010322.111071.54880732.617800.548503.555202.35240K562SRFBP1
NISCHENSG00000010322.111505.95880817.314600.881609.145207.86910K562SRSF1
NISCHENSG00000010322.111182.16570884.348900.418603.778802.51970K562SRSF4
NISCHENSG00000010322.111144.23970772.103400.567402.874401.80140K562SRSF5
NISCHENSG00000010322.11944.686101212.84800-0.360503.411102.50010K562SYNCRIP
NISCHENSG00000010322.111298.41330826.991800.650703.951803.09880K562TARDBP
NISCHENSG00000010322.111361.83770797.775300.771408.321906.79170K562TIA1
NISCHENSG00000010322.111231.13490783.290300.652305.170103.58220K562TRA2A
NISCHENSG00000010322.111166.53370865.532200.430502.727401.78940K562TRIM56
NISCHENSG00000010322.111483.504001123.133000.401403.062501.58960K562TRIP6
NISCHENSG00000010322.112135.562601832.241800.220902.481601.79950K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NISCH is not available on ENCORE database.





15 RBPs can affect the splicing of NISCH :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENISCHENSG00000010322.11chr3+5251489452515125525141545251431152518528525186530.282000.001460.09793includedHepG2G3BP1
SENISCHENSG00000010322.11chr3+525240905252424752523351525236945252536752525529-0.149000.005540.06726excludedK562PUS1
SENISCHENSG00000010322.11chr3+525148945251512552514154525143115251852852518653-0.155000.001160.02882excludedHepG2SRSF1
SENISCHENSG00000010322.11chr3+5252048552520568525198005251984352521211525216690.246000.003400.05141includedK562HNRNPC
A3SSNISCHENSG00000010322.11chr3+5251238852512593525124645251259352512112525122980.273000.000400.01834longerK562U2AF2
A3SSNISCHENSG00000010322.11chr3+525123885251259352512464525125935251211252512298-0.105000.000340.03625shorterHepG2SRSF1
A3SSNISCHENSG00000010322.11chr3+5251239052512599525124645251259952512112525122980.141000.000210.00730longerHepG2U2AF2
A3SSNISCHENSG00000010322.11chr3+525123885251259352512390525125935251211252512298-0.414000.000650.08742shorterK562SF3B1
A3SSNISCHENSG00000010322.11chr3+5251238852512593525124645251259352512112525122980.239000.000270.01597longerK562U2AF1
A5SSNISCHENSG00000010322.11chr3+5251246452512659525124645251259352513764525138780.088000.000480.05030longerK562PRPF8
RINISCHENSG00000010322.11chr3+5251158952512298525115895251165852512112525122980.126000.000000.00001includedHepG2SF3A3
RINISCHENSG00000010322.11chr3+5251158952512298525115895251165852512112525122980.186000.000110.00226includedK562PRPF8
RINISCHENSG00000010322.11chr3+5251158952512298525115895251165852512112525122980.094000.001610.02296includedHepG2PCBP1
RINISCHENSG00000010322.11chr3+5251158952512298525115895251165852512112525122980.141000.000020.00036includedHepG2U2AF1
RINISCHENSG00000010322.11chr3+525115895251229852511589525116585251211252512298-0.052000.004760.06354excludedHepG2G3BP1
RINISCHENSG00000010322.11chr3+5251158952512298525115895251165852512112525122980.132000.000150.00481includedK562U2AF1
RINISCHENSG00000010322.11chr3+5251158952512298525115895251165852512112525122980.192000.000010.00019includedK562U2AF2
RINISCHENSG00000010322.11chr3+525115895251229852511589525116585251211252512298-0.053000.005860.08038excludedHepG2TIAL1
RINISCHENSG00000010322.11chr3+525115895251229852511589525116585251211252512298-0.064000.000800.04431excludedHepG2HNRNPU
RINISCHENSG00000010322.11chr3+5251158952512298525115895251165852512112525122980.086000.002470.03824includedHepG2SRSF9
RINISCHENSG00000010322.11chr3+5251158952512298525115895251165852512112525122980.275000.000000.00001includedK562EFTUD2
RINISCHENSG00000010322.11chr3+5251158952512298525115895251165852512112525122980.147000.000000.00000includedK562AQR
MXENISCHENSG00000010322.11chr3+52523351525236945252409052524247525212115252262152524720525248490.238000.000010.000451includedK562SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NISCH is not avaliable on ENCORE database.