MTM1

General Information

Gene Name : MTM1
Gene ID : ENSG00000171100.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MTM1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MTM1	ENSG00000171100.14	6.80	5.36	6.08	ENCSR000AEF
HepG2	MTM1	ENSG00000171100.14	8.33	16.76	12.55	ENCSR985KAT
K562	MTM1	ENSG00000171100.14	7.17	7.58	7.38	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MTM1 is not avaliable on ENCORE database.

Proteins bound to RNA

MTM1 RNA is bound by 9 proteins.

CanvasJS.com

eCLIP assay for MTM1 is not avaliable on ENCORE database.

9 proteins are bound to MTM1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	149775317	149775495	+	intron-Distal	7.01589	26.66084	HepG2	DDX59
chrX	149775232	149775389	+	intron-Distal	5.92505	24.68026	HepG2	PCBP2
chrX	149767259	149767388	+	intron-Distal	5.33285	10.31535	HepG2	QKI
chrX	149778088	149778166	+	intron-Distal	3.98584	7.29258	HepG2	SUGP2
chrX	149778283	149778347	+	intron-Distal	4.81845	7.14375	HepG2	SUGP2
chrX	149772887	149772951	+	intron-Distal	3.90098	7.03506	HepG2	SUGP2
chrX	149807436	149807490	+	CDS	3.22883	5.69345	HepG2	BCLAF1
chrX	149776193	149776281	+	intron-Distal	3.62229	5.56133	HepG2	SUGP2
chrX	149770660	149770723	+	intron-Distal	3.65305	5.30446	HepG2	SUGP2
chrX	149775259	149775435	+	intron-Distal	3.39203	5.12480	HepG2	HNRNPK
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 29 entries

eCLIP assay for MTM1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MTM1 is not available on ENCORE database.
88 RBPs can affect the levels of MTM1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MTM1 is not available on ENCORE database.

88 RBPs can affect the gene expression of MTM1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MTM1	ENSG00000171100.10	240.68930	768.52930	-1.67490	26.87200	24.99050	HepG2	FXR1
MTM1	ENSG00000171100.10	236.90440	720.82020	-1.60530	25.54540	23.72060	HepG2	CPSF6
MTM1	ENSG00000171100.10	408.93900	756.76450	-0.88800	14.68160	13.40170	HepG2	SRSF5
MTM1	ENSG00000171100.10	319.08220	618.08410	-0.95390	14.52870	12.84720	HepG2	PARN
MTM1	ENSG00000171100.10	315.17100	712.99460	-1.17780	13.82040	12.39600	HepG2	G3BP1
MTM1	ENSG00000171100.10	167.08530	499.98020	-1.58130	14.66020	12.31440	HepG2	UPF2
MTM1	ENSG00000171100.10	304.56360	554.85500	-0.86540	13.08190	11.77040	HepG2	DNAJC2
MTM1	ENSG00000171100.10	220.74210	557.90110	-1.33760	13.95040	11.74570	HepG2	BCCIP
MTM1	ENSG00000171100.10	427.40540	808.57420	-0.91980	12.39740	11.46150	HepG2	RBM22
MTM1	ENSG00000171100.10	444.22010	802.91250	-0.85400	12.71710	11.13840	HepG2	NOL12
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 104 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MTM1 is not available on ENCORE database.

5 RBPs can affect the splicing of MTM1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
MXE	MTM1	ENSG00000171100.10	chrX	+	149767055	149767150	149783061	149783172	149764961	149765034	149787510	149787612	0.41900	0.00015	0.00711	1included	K562	FXR2
MXE	MTM1	ENSG00000171100.10	chrX	+	149767055	149767150	149783061	149783172	149764961	149765034	149787510	149787612	0.21400	0.00123	0.00961	1included	HepG2	U2AF2
A5SS	MTM1	ENSG00000171100.10	chrX	+	149783061	149783208			149783061	149783172	149787510	149787612	0.13500	0.00130	0.02339	longer	K562	AQR
MXE	MTM1	ENSG00000171100.10	chrX	+	149767033	149767150	149783061	149783172	149764961	149765034	149787510	149787612	0.25000	0.00157	0.01348	1included	K562	AQR
MXE	MTM1	ENSG00000171100.10	chrX	+	149767055	149767150	149783061	149783172	149764961	149765034	149787510	149787612	-0.16700	0.00376	0.08411	2included	HepG2	RBFOX2
A3SS	MTM1	ENSG00000171100.10	chrX	+	149787478	149787612			149787510	149787612	149783061	149783172	0.08000	0.00479	0.02782	longer	K562	AQR
SE	MTM1	ENSG00000171100.10	chrX	+	149783061	149783172			149764961	149765034	149787510	149787612	-0.29700	0.00788	0.08770	excluded	K562	PUS1
A3SS	MTM1	ENSG00000171100.10	chrX	+	149767033	149767150			149767055	149767150	149764961	149765034	0.17700	0.01966	0.09396	longer	K562	AQR

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MTM1

General Information

Functions

Localization

Domains (AlphaFold: MTM1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MTM1 is not avaliable on ENCORE database.

9 proteins are bound to MTM1 RNA:

eCLIP assay for MTM1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MTM1 is not available on ENCORE database.

88 RBPs can affect the gene expression of MTM1 :

The Knockdown/knockout RNA-Seq assay for MTM1 is not available on ENCORE database.

5 RBPs can affect the splicing of MTM1 :

The Knockdown/knockout RNA-Seq assay for MTM1 is not avaliable on ENCORE database.