MDM4

General Information

Gene Name : MDM4
Gene ID : ENSG00000198625.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MDM4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MDM4	ENSG00000198625.12	8.62	8.42	8.52	ENCSR000AEF
HepG2	MDM4	ENSG00000198625.12	5.92	6.35	6.13	ENCSR985KAT
K562	MDM4	ENSG00000198625.12	7.25	6.74	7.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MDM4 is not avaliable on ENCORE database.

Proteins bound to RNA

MDM4 RNA is bound by 28 proteins.

CanvasJS.com

eCLIP assay for MDM4 is not avaliable on ENCORE database.

28 proteins are bound to MDM4 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	204511924	204512071	+	3'-UTR,CDS,intron-Distal	3.67815	25.96285	K562	ZNF622
chr1	204518310	204518450	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.26910	19.43067	HepG2	BCLAF1
chr1	204511994	204512075	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.64042	18.49416	HepG2	BCLAF1
chr1	204511917	204511994	+	3'-UTR,CDS,intron-Distal	4.45778	17.55697	HepG2	BCLAF1
chr1	204506650	204506707	+	intron-Distal,intron-Proximal	4.86520	14.93315	HepG2	TIAL1
chr1	204518676	204518773	+	3'-UTR,CDS,intron-Distal	4.00344	14.57929	K562	RBM15
chr1	204511924	204512052	+	3'-UTR,CDS,intron-Distal	3.09266	14.08027	K562	UCHL5
chr1	204506879	204506946	+	intron-Distal	4.85023	14.00109	K562	TARDBP
chr1	204501317	204501388	+	CDS,intron-Distal,intron-Proximal	3.43352	13.50876	HepG2	BCLAF1
chr1	204513662	204513743	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.14018	11.64153	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 72 entries

eCLIP assay for MDM4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MDM4 is not available on ENCORE database.
91 RBPs can affect the levels of MDM4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MDM4 is not available on ENCORE database.

91 RBPs can affect the gene expression of MDM4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MDM4	ENSG00000198625.8	1444.45580	761.02390	0.92440	27.24160	25.84550	HepG2	SRSF9
MDM4	ENSG00000198625.8	4130.05150	1930.84160	1.09680	26.09140	24.48710	K562	AQR
MDM4	ENSG00000198625.8	785.82950	1401.58280	-0.83480	21.80710	20.33130	HepG2	SUCLG1
MDM4	ENSG00000198625.8	1558.11030	840.89030	0.88970	21.27460	19.92520	HepG2	TAF15
MDM4	ENSG00000198625.8	1696.23200	846.03080	1.00350	21.39110	19.62440	HepG2	RBM25
MDM4	ENSG00000198625.8	810.90490	1325.00960	-0.70840	17.79050	16.55450	HepG2	PUM1
MDM4	ENSG00000198625.8	1608.67390	932.14130	0.78720	15.82010	14.50460	HepG2	QKI
MDM4	ENSG00000198625.8	957.93330	1749.94290	-0.86930	15.25950	13.44650	K562	GRSF1
MDM4	ENSG00000198625.8	1402.17490	2263.92390	-0.69120	14.78300	13.39720	K562	RBM15
MDM4	ENSG00000198625.8	485.99660	1014.61890	-1.06190	13.71920	12.43230	HepG2	DDX3X
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 104 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MDM4 is not available on ENCORE database.

16 RBPs can affect the splicing of MDM4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MDM4	ENSG00000198625.8	chr1	+	204513662	204513812	204511911	204512072	204515924	204515960	-0.51300	0.00000	0.00000	excluded	HepG2	U2AF1
SE	MDM4	ENSG00000198625.8	chr1	+	204506557	204506625	204501318	204501374	204507336	204507436	0.34600	0.00000	0.00000	included	K562	PUM1
SE	MDM4	ENSG00000198625.8	chr1	+	204506557	204506625	204501318	204501374	204507336	204507436	0.29600	0.00000	0.00366	included	K562	PUM2
A5SS	MDM4	ENSG00000198625.8	chr1	+	204513662	204513812	204513662	204513797	204515924	204516005	-0.15600	0.00000	0.00009	shorter	K562	PUS1
SE	MDM4	ENSG00000198625.8	chr1	+	204506557	204506625	204501318	204501374	204507336	204507436	0.25500	0.00001	0.00569	included	K562	EIF4G2
SE	MDM4	ENSG00000198625.8	chr1	+	204513662	204513812	204511911	204512072	204515924	204515960	-0.34200	0.00005	0.00116	excluded	HepG2	U2AF2
A5SS	MDM4	ENSG00000198625.8	chr1	+	204513662	204513812	204513662	204513797	204515924	204515960	0.12300	0.00005	0.01985	longer	K562	DROSHA
A5SS	MDM4	ENSG00000198625.8	chr1	+	204485578	204485747	204485578	204485637	204494611	204494724	0.29500	0.00006	0.01007	longer	HepG2	RBM22
SE	MDM4	ENSG00000198625.8	chr1	+	204506557	204506625	204501318	204501374	204507336	204507436	0.49500	0.00017	0.00998	included	K562	PTBP1
SE	MDM4	ENSG00000198625.8	chr1	+	204506557	204506625	204501318	204501374	204507336	204507436	-0.33200	0.00023	0.00406	excluded	HepG2	U2AF2

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MDM4

General Information

Functions

Localization

Domains (AlphaFold: MDM4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MDM4 is not avaliable on ENCORE database.

28 proteins are bound to MDM4 RNA:

eCLIP assay for MDM4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MDM4 is not available on ENCORE database.

91 RBPs can affect the gene expression of MDM4 :

The Knockdown/knockout RNA-Seq assay for MDM4 is not available on ENCORE database.

16 RBPs can affect the splicing of MDM4 :

The Knockdown/knockout RNA-Seq assay for MDM4 is not avaliable on ENCORE database.