LIX1L

General Information

Gene Name       : LIX1L
Gene ID             : ENSG00000271601.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LIX1L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LIX1LENSG00000271601.312.6112.5312.57ENCSR000AEF
HepG2LIX1LENSG00000271601.36.159.337.74ENCSR985KAT
K562LIX1LENSG00000271601.37.628.398.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LIX1L is not avaliable on ENCORE database.



Proteins bound to RNA
  • LIX1L RNA is bound by 7 proteins.  







eCLIP assay for LIX1L is not avaliable on ENCORE database.





7 proteins are bound to LIX1L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1145498829145498889+3'-UTR4.9860523.88543K562PUM2
chr1145499313145499357+3'-UTR4.122333.15612HepG2PCBP2
chr1145498906145498974+3'-UTR4.447883.19904K562TIA1
chr1145498901145498948+3'-UTR3.570396.79091K562PUM2
chr1145499297145499378+3'-UTR3.175743.61097K562ILF3
chr1145499337145499385+3'-UTR3.352864.76929K562FAM120A
chr1145499230145499306+3'-UTR5.1336311.56505HepG2PCBP2
chr1145500920145500967+3'-UTR4.617054.92659K562FAM120A
chr1145499626145499812+3'-UTR3.040386.98729K562FAM120A
chr1145498992145499062+3'-UTR4.040343.45860K562TIA1
chr1145499047145499165+3'-UTR4.622396.05696K562IGF2BP1
chr1145498970145499047+3'-UTR4.703456.30939K562IGF2BP1
chr1145487391145487421+CDS4.012073.67607K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LIX1L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LIX1L is not available on ENCORE database.

  • 89 RBPs can affect the levels of LIX1L.  








The Knockdown/knockout RNA-Seq assay for LIX1L is not available on ENCORE database.





89 RBPs can affect the gene expression of LIX1L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LIX1LENSG00000152022.7940.46980629.165100.579806.905306.03140HepG2ACO1
LIX1LENSG00000152022.72023.85020968.530101.0631014.6783013.55220HepG2AKAP1
LIX1LENSG00000152022.7573.28600801.36450-0.483203.344902.48100HepG2ASCC1
LIX1LENSG00000152022.7340.21400758.64990-1.157003.602302.92910HepG2BOP1
LIX1LENSG00000152022.7454.15670668.88530-0.558604.575203.00770HepG2BUD13
LIX1LENSG00000152022.7392.68600629.15630-0.680006.181205.25930HepG2CKAP4
LIX1LENSG00000152022.7451.16180735.24620-0.704607.061505.37130HepG2CPSF7
LIX1LENSG00000152022.7205.38620372.35460-0.858306.256004.73610HepG2CSTF2
LIX1LENSG00000152022.7335.21940554.53350-0.726204.102502.57080HepG2DDX27
LIX1LENSG00000152022.7460.10350710.30570-0.626505.469504.09580HepG2DDX5
LIX1LENSG00000152022.7527.52650703.99830-0.416304.687503.87420HepG2DNAJC2
LIX1LENSG00000152022.7484.23850766.13240-0.661905.427904.61460HepG2EIF2S1
LIX1LENSG00000152022.7496.00850677.23200-0.449303.049501.81590HepG2EIF2S2
LIX1LENSG00000152022.7484.67540824.37760-0.766305.465204.52190HepG2EIF4B
LIX1LENSG00000152022.7700.62330901.96160-0.364403.666202.72540HepG2EIF4G1
LIX1LENSG00000152022.7363.11230528.06780-0.540304.085602.73500HepG2FASTKD2
LIX1LENSG00000152022.71131.82140901.298300.328502.015501.35280HepG2FIP1L1
LIX1LENSG00000152022.7407.59520535.10910-0.392702.479601.73510HepG2FUBP3
LIX1LENSG00000152022.7495.33790792.45170-0.677905.624604.68960HepG2G3BP1
LIX1LENSG00000152022.7472.28600789.69490-0.741601.994801.44540HepG2GPKOW
LIX1LENSG00000152022.71073.34460717.125300.581705.970305.07100HepG2HNRNPA1
LIX1LENSG00000152022.7487.56960634.90920-0.380903.164402.40090HepG2HNRNPF
LIX1LENSG00000152022.7318.62560792.38030-1.3143031.0248029.17780HepG2HNRNPU
LIX1LENSG00000152022.7480.76140625.20320-0.379002.751102.02890HepG2IGF2BP1
LIX1LENSG00000152022.7464.03540805.49220-0.795607.890606.81100HepG2IGF2BP2
LIX1LENSG00000152022.7656.26050809.39310-0.302603.017402.25460HepG2ILF2
LIX1LENSG00000152022.7791.300101127.13320-0.510403.422702.49770HepG2LARP4
LIX1LENSG00000152022.7546.63600854.61230-0.644705.431904.52140HepG2MAGOH
LIX1LENSG00000152022.7544.91630879.61090-0.690805.997205.08100HepG2NCBP2
LIX1LENSG00000152022.7303.33940783.29370-1.3686019.2872017.42300HepG2PABPC4
LIX1LENSG00000152022.7614.28870784.34170-0.352603.235002.32620HepG2PARN
LIX1LENSG00000152022.7628.14150814.23940-0.374403.683503.00430HepG2PCBP1
LIX1LENSG00000152022.7484.66100706.74280-0.544205.915604.86840HepG2PPIL4
LIX1LENSG00000152022.7687.06690828.51710-0.270101.868501.40170HepG2PTBP1
LIX1LENSG00000152022.7618.41290865.39700-0.484804.241603.52150HepG2PUF60
LIX1LENSG00000152022.7613.79390917.98610-0.580706.608605.58860HepG2PUM2
LIX1LENSG00000152022.7894.29330640.864200.480606.030505.18350HepG2PUS1
LIX1LENSG00000152022.7560.99400897.30860-0.677608.789307.77200HepG2QKI
LIX1LENSG00000152022.7613.73980922.06160-0.587207.746906.92300HepG2NELFE
LIX1LENSG00000152022.7696.91010858.77220-0.301302.555201.95930HepG2RECQL
LIX1LENSG00000152022.7424.59440683.96840-0.687806.721605.72320HepG2RPLP0
LIX1LENSG00000152022.7372.69050477.42890-0.357301.915901.39580HepG2RPS19
LIX1LENSG00000152022.7403.73780577.50220-0.516402.715801.92410HepG2RPS3A
LIX1LENSG00000152022.7329.24980452.30200-0.458102.040401.35500HepG2RRP9
LIX1LENSG00000152022.7327.06960479.16660-0.550903.512202.44920HepG2SERBP1
LIX1LENSG00000152022.7626.36460862.59670-0.461705.068904.30940HepG2SF3B4
LIX1LENSG00000152022.7658.08780829.78040-0.334403.326002.56810HepG2SLBP
LIX1LENSG00000152022.7436.86990690.31740-0.660104.415403.18830HepG2SMNDC1
LIX1LENSG00000152022.7687.22270900.36280-0.389704.062603.51680HepG2SRSF1
LIX1LENSG00000152022.7579.47970854.45320-0.560207.249306.30100HepG2SRSF5
LIX1LENSG00000152022.7474.42870623.78090-0.394803.478702.71100HepG2SRSF7
LIX1LENSG00000152022.7603.87970732.49190-0.278601.859901.39120HepG2SRSF9
LIX1LENSG00000152022.7390.28410602.18740-0.625703.438602.06810HepG2STAU1
LIX1LENSG00000152022.7614.99820971.74900-0.6600011.5717010.44720HepG2SUCLG1
LIX1LENSG00000152022.7446.30130695.15980-0.639304.148202.51780HepG2SUGP2
LIX1LENSG00000152022.7262.42990589.97090-1.1687010.856009.66240HepG2SUPV3L1
LIX1LENSG00000152022.7583.94210743.61980-0.348702.531701.72970HepG2TIA1
LIX1LENSG00000152022.7258.86700770.00800-1.5727033.3653031.97730HepG2TIAL1
LIX1LENSG00000152022.7520.22650776.82430-0.578407.699206.83570HepG2TRIM56
LIX1LENSG00000152022.7613.32180845.45590-0.463104.021202.94320HepG2TUFM
LIX1LENSG00000152022.7190.13850348.52700-0.874206.139004.99780HepG2UCHL5
LIX1LENSG00000152022.7520.09550668.06210-0.361202.979101.89700HepG2UTP18
LIX1LENSG00000152022.7479.12820627.49960-0.389203.307002.66280HepG2UTP3
LIX1LENSG00000152022.71335.01690861.290500.6322011.7759010.69920K562AGGF1
LIX1LENSG00000152022.71297.62230896.210300.533903.493502.75540K562AKAP8L
LIX1LENSG00000152022.71158.72310940.337500.301202.784401.86800K562ATP5C1
LIX1LENSG00000152022.7875.37260601.715100.540704.348103.24740K562BOP1
LIX1LENSG00000152022.7822.89710639.789900.363002.649301.88070K562CPSF6
LIX1LENSG00000152022.71015.70290840.961500.272302.472701.85180K562DDX47
LIX1LENSG00000152022.71148.06640964.396000.251402.171501.40670K562DKC1
LIX1LENSG00000152022.7732.05590536.840800.447404.261303.39760K562EIF2S2
LIX1LENSG00000152022.7952.93170650.982600.549704.821203.69080K562FMR1
LIX1LENSG00000152022.7758.22290551.771400.458503.007302.05040K562FTO
LIX1LENSG00000152022.7451.47020587.62170-0.380302.813102.20370K562FXR1
LIX1LENSG00000152022.71127.02700733.764700.619002.450501.32480K562HNRNPA2B1
LIX1LENSG00000152022.7394.19140513.98070-0.382802.123301.59210K562HNRNPC
LIX1LENSG00000152022.71086.00320847.852600.357002.379101.63840K562HSPD1
LIX1LENSG00000152022.71286.44280951.108500.435604.165003.12690K562KIF1C
LIX1LENSG00000152022.7909.16950521.591200.801505.147603.82310K562KRR1
LIX1LENSG00000152022.7451.05530647.83730-0.522304.457603.38500K562MAGOH
LIX1LENSG00000152022.71184.20290910.440500.379202.834101.74310K562MAK16
LIX1LENSG00000152022.7748.64490596.247200.328302.091501.32930K562METAP2
LIX1LENSG00000152022.71154.35650746.824500.628103.476102.46250K562NAA15
LIX1LENSG00000152022.7850.00350665.951000.352003.871503.00580K562NSUN2
LIX1LENSG00000152022.7995.30660641.732200.633102.509901.57910K562PABPN1
LIX1LENSG00000152022.7464.15320629.41290-0.439403.492602.75700K562PTBP1
LIX1LENSG00000152022.71423.397001157.144000.298702.324101.35340K562PUM1
LIX1LENSG00000152022.71472.91970888.805600.728608.603107.69420K562PUS1
LIX1LENSG00000152022.71198.82380865.998200.469105.676204.85180K562RBM15
LIX1LENSG00000152022.7629.49350405.625900.633904.360503.33130K562RPS19
LIX1LENSG00000152022.7971.37860657.142300.563707.634006.33220K562SF3A3
LIX1LENSG00000152022.7876.39890580.945100.593104.527003.26730K562SF3B1
LIX1LENSG00000152022.7484.01060617.03220-0.350302.259401.61190K562SRSF1
LIX1LENSG00000152022.7667.14240483.508400.464404.208402.74550K562SRSF7
LIX1LENSG00000152022.7701.66550470.730500.575805.052403.68020K562TRIM56
LIX1LENSG00000152022.7904.90820706.123000.357803.663402.84540K562UPF1
LIX1LENSG00000152022.7765.68340604.205500.341602.418501.59800K562WDR3
LIX1LENSG00000152022.7755.36200628.314700.265602.176401.41890K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LIX1L is not available on ENCORE database.





1 RBPs can affect the splicing of LIX1L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELIX1LENSG00000152022.7chr1+145497392145497488145492234145492375145498102145498180-0.468000.000000.00000excludedK562SRSF1
SELIX1LENSG00000152022.7chr1+145497392145497488145492234145492375145498102145498180-0.182000.000870.02283excludedHepG2SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LIX1L is not avaliable on ENCORE database.