KIF1B

General Information

Gene Name       : KIF1B
Gene ID             : ENSG00000054523.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KIF1B)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KIF1BENSG00000054523.1711.219.5010.36ENCSR000AEF
HepG2KIF1BENSG00000054523.1719.5124.7522.13ENCSR985KAT
K562KIF1BENSG00000054523.1710.6610.6610.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KIF1B is not avaliable on ENCORE database.



Proteins bound to RNA

  • KIF1B RNA is bound by 33 proteins.  







eCLIP assay for KIF1B is not avaliable on ENCORE database.





33 proteins are bound to KIF1B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11044146410441523+3'-UTR3.745805.35418HepG2FUBP3
chr11044146910441524+3'-UTR5.2713625.48184K562PUM2
chr11043826510438324+3'-UTR,intron-Distal,intron-Proximal3.572793.24593HepG2XPO5
chr11043742710437503+3'-UTR,intron-Distal3.892009.42497HepG2HNRNPM
chr11044153210441591+3'-UTR5.643998.48206K562PUM2
chr11043929810439373+3'-UTR3.392943.42164K562UPF1
chr11044147310441527+3'-UTR5.106039.09374HepG2DDX55
chr11043684010436901+3'-UTR,intron-Distal3.1379616.96742HepG2HNRNPL
chr11044153710441595+3'-UTR4.2511721.08831HepG2DDX55
chr11036695310367042+3'-UTR,intron-Distal3.796483.04123K562LIN28B
chr11043690210436968+3'-UTR,intron-Distal3.2271118.48279HepG2HNRNPL
chr11036864510368716+3'-UTR,intron-Distal,polyA_site5.029508.80407HepG2CSTF2
chr11043742210437517+3'-UTR,intron-Distal3.549774.44979HepG2GRSF1
chr11043658910436648+3'-UTR,CDS,intron-Distal,intron-Proximal3.660114.21358HepG2U2AF2
chr11036688110366930+3'-UTR,intron-Distal3.360403.07801K562UPF1
chr11027086810270938+5'-UTR,intron-Proximal4.064425.66107K562FXR2
chr11029235810292489+5'-UTR,CDS3.6999713.26331HepG2BCLAF1
chr11027088610270938+5'-UTR,intron-Proximal4.5849518.59875HepG2DDX3X
chr11035116910351217+CDS3.8638311.53232HepG2BCLAF1
chr11040211410402145+CDS3.331594.85828HepG2BCLAF1
chr11033157610331639+CDS,intron-Proximal4.3855912.52201HepG2BCLAF1
chr11035578610355826+CDS,intron-Proximal3.679564.82082K562ZNF622
chr11033160110331658+CDS,intron-Proximal3.927654.75655HepG2PRPF8
chr11038009910380194+CDS,intron-Proximal3.5070110.66918HepG2FXR2
chr11036359610363659+CDS,intron-Distal4.021033.32022K562UCHL5
chr11036363210363681+CDS,intron-Distal4.031833.20027K562ZNF622
chr11033814210338203+CDS,intron-Proximal3.572517.29769HepG2PRPF8
chr11033548510335497+CDS,intron-Proximal4.270004.08604HepG2PPIG
chr11036407610364108+CDS,intron-Distal3.909843.04254K562UCHL5
chr11033639310336425+CDS3.756298.62339HepG2GRWD1
chr11032749510327565+CDS3.700543.64266HepG2PPIG
chr11035663910356724+CDS,intron-Proximal3.409926.20917HepG2ZNF800
chr11038010010380183+CDS,intron-Proximal3.409219.31761HepG2GRWD1
chr11042518710425331+CDS,intron-Proximal3.685047.26626HepG2PPIG
chr11032744710327498+CDS4.3598222.01248HepG2BCLAF1
chr11034251410342593+CDS,intron-Proximal3.388468.81470HepG2GRWD1
chr11035215310352181+CDS,intron-Proximal3.826269.50935HepG2BCLAF1
chr11034254610342632+CDS,intron-Proximal5.2358712.43500HepG2PRPF8
chr11033229910332365+CDS,intron-Proximal3.5128714.44526HepG2BCLAF1
chr11032744510327529+CDS4.221173.66349K562LIN28B
chr11038400110384114+CDS4.194107.26028HepG2FXR2
chr11038012010380194+CDS4.3728215.25564HepG2BCLAF1
chr11035722910357274+CDS,intron-Proximal3.675967.89260HepG2BCLAF1
chr11042098710421097+CDS3.332154.06225HepG2FXR2
chr11033551110335562+CDS,intron-Proximal3.3503910.76374HepG2BCLAF1
chr11034254610342590+CDS3.297044.51003HepG2PPIG
chr11035210510352181+CDS,intron-Proximal5.4768211.76439HepG2GRWD1
chr11033815210338191+CDS,intron-Proximal4.267184.38106HepG2PPIG
chr11039466710394697+CDS,intron-Proximal3.590124.68902HepG2PPIG
chr11038183710381906+CDS3.5871012.00653HepG2BCLAF1
chr11042517710425265+CDS4.261079.69111HepG2BCLAF1
chr11039462810394697+CDS,intron-Proximal3.100664.55847HepG2G3BP1
chr11038178110381834+CDS3.260013.08145HepG2HLTF
chr11032749910327567+CDS3.8357815.36859HepG2BCLAF1
chr11032823410328321+CDS3.275424.29172K562YBX3
chr11031854810318605+CDS,intron-Proximal3.2029410.62277HepG2BCLAF1
chr11042515610425304+CDS,intron-Proximal3.182655.15172HepG2G3BP1
chr11032743710327615+CDS,intron-Proximal3.138783.73972HepG2UCHL5
chr11035211310352158+CDS3.884183.36483HepG2G3BP1
chr11032827510328322+CDS,intron-Proximal3.208178.01569HepG2BCLAF1
chr11032821010328230+CDS3.848783.56019HepG2GRWD1
chr11039744310397482+CDS3.975663.82000HepG2GRWD1
chr11039713010397242+CDS,intron-Proximal3.384626.81726HepG2GRWD1
chr11035515110355175+CDS4.483403.53690K562ZNF622
chr11035571610355783+CDS,intron-Proximal4.0877714.52112HepG2BCLAF1
chr11031868910318733+CDS,intron-Proximal3.644399.83277HepG2BCLAF1
chr11035663910356719+CDS,intron-Proximal3.841117.05173K562ZNF622
chr11032196410321998+CDS3.515708.47761HepG2BCLAF1
chr11039671410396765+CDS,intron-Proximal3.647443.32039HepG2PPIG
chr11032743710327503+CDS,intron-Proximal4.765653.72865HepG2LIN28B
chr11032198810322026+CDS3.314613.72388HepG2FXR2
chr11038176610381827+CDS,intron-Proximal4.3953610.57092HepG2BCLAF1
chr11036334010363380+CDS,intron-Distal3.778323.01428K562UCHL5
chr11033804410338066+CDS4.385597.09561HepG2BCLAF1
chr11041266210412730+CDS,intron-Proximal3.028594.81700HepG2U2AF2
chr11035520310355224+CDS,intron-Proximal4.2085110.24470HepG2BCLAF1
chr11043498310435042+CDS3.130114.23325HepG2BCLAF1
chr11032201210322065+CDS,intron-Proximal5.540248.38577HepG2PRPF8
chr11033806610338123+CDS4.6254214.21310HepG2BCLAF1
chr11035514310355203+CDS,intron-Proximal3.9022715.57800HepG2BCLAF1
chr11031860510318689+CDS4.1529517.28671HepG2BCLAF1
chr11043500010435097+CDS3.519904.34339HepG2FXR2
chr11035723110357306+CDS,intron-Proximal3.882355.26203HepG2FXR2
chr11039748210397529+CDS3.194723.85127HepG2GRWD1
chr11043121110431319+CDS3.076873.70754HepG2FXR2
chr11035515110355224+CDS,intron-Proximal4.370764.12139K562DDX24
chr11035578310355824+CDS4.314727.53358HepG2BCLAF1
chr11035663810356721+CDS,intron-Proximal3.127897.38586HepG2PPIG
chr11034230310342386+CDS,intron-Distal,intron-Proximal5.4789227.58041HepG2PTBP1
chr11033548510335511+CDS,intron-Proximal3.783828.81620HepG2BCLAF1
chr11032820810328231+CDS,intron-Proximal3.448824.56058HepG2BCLAF1
chr11035663910356727+CDS,intron-Proximal4.197687.23632K562UCHL5
chr11035724910357305+CDS,intron-Proximal4.3991410.74047HepG2GRWD1
chr11038483710384887+CDS4.934546.23448K562FXR2
chr11034253410342574+CDS3.133945.53494HepG2BCLAF1
chr11035727410357308+CDS,intron-Proximal4.5466414.21310HepG2BCLAF1
chr11038182910381897+CDS4.669517.58393HepG2FXR2
chr11033155810331576+CDS,intron-Proximal3.830585.45876HepG2BCLAF1
chr11032199810322038+CDS,intron-Proximal4.2867821.03307HepG2BCLAF1
chr11039714710397200+CDS3.075723.73413HepG2PPIG
chr11038183810381905+CDS3.107784.51003HepG2PPIG
chr11035514510355205+CDS3.741325.42720K562UCHL5
chr11035115110351219+CDS3.366973.73423K562UCHL5
chr11035663910356725+CDS,intron-Proximal3.3024411.33662HepG2GRWD1
chr11032743610327447+CDS,intron-Proximal4.0268814.09262HepG2BCLAF1
chr11038482510384888+CDS3.589444.86632HepG2G3BP1
chr11033636610336449+CDS,intron-Proximal3.105329.07363HepG2BUD13
chr11035721510357288+CDS,intron-Proximal4.824683.91589K562SF3B4
chr11038183310381908+CDS3.645948.76261HepG2GRWD1
chr11034231810342385+CDS,intron-Distal,intron-Proximal4.6962615.23652K562PTBP1
chr11039713510397228+CDS3.3182310.93851HepG2BCLAF1
chr11031855010318597+CDS,intron-Proximal3.530315.11891HepG2GRWD1
chr11035664110356716+CDS3.939333.66655K562YBX3
chr11032756710327616+CDS3.3955911.17783HepG2BCLAF1
chr11033232510332365+CDS,intron-Proximal3.350505.60389HepG2PPIG
chr11035727510357323+CDS,intron-Proximal3.932478.69525HepG2PPIG
chr11035577710355826+CDS,intron-Proximal3.437117.44807HepG2GRWD1
chr11038000110380167+CDS,intron-Proximal3.082929.12729HepG2U2AF2
chr11034258110342673+CDS,intron-Proximal3.884434.95247K562PRPF8
chr11035210810352181+CDS,intron-Proximal5.106886.59793K562UCHL5
chr11034245510342527+CDS,intron-Proximal3.327745.58370HepG2PPIG
chr11035571610355796+CDS,intron-Proximal4.412175.49297K562GRWD1
chr11036427910364325+CDS,intron-Distal4.040583.36385K562UCHL5
chr11038010310380201+CDS,intron-Proximal3.224559.30359HepG2BUD13
chr11042560310425659+CDS5.084543.71264HepG2FXR2
chr11038009910380120+CDS,intron-Proximal3.573877.83567HepG2BCLAF1
chr11043502710435102+CDS4.037024.09449HepG2YBX3
chr11034257410342593+CDS,intron-Proximal4.1380810.24470HepG2BCLAF1
chr11035210310352153+CDS,intron-Proximal3.4993910.92438HepG2BCLAF1
chr11042554010425592+CDS4.175084.51688K562YBX3
chr11043122810431320+CDS3.213213.86751HepG2YBX3
chr11035571610355777+CDS,intron-Proximal3.409678.73356HepG2GRWD1
chr11038176610381833+CDS,intron-Proximal3.089516.42940HepG2GRWD1
chr11042108910421144+CDS,intron-Proximal4.648514.68690HepG2PRPF8
chr11036395410364006+CDS,intron-Distal4.264314.16170K562UCHL5
chr11035514410355207+CDS3.372268.50585HepG2GRWD1
chr11040590810405947+CDS3.915513.38114HepG2GRWD1
chr11032755910327615+CDS3.797036.18214HepG2GRWD1
chr11034096110341045+intron-Distal5.2408610.79882K562RBFOX2
chr11031447110314610+intron-Distal3.519134.66833HepG2HNRNPL
chr11034919810349307+intron-Distal4.491287.96448K562PTBP1
chr11034921110349315+intron-Distal5.463037.45191HepG2PTBP1
chr11034920710349307+intron-Distal3.835403.39827HepG2MATR3
chr11035900610359065+intron-Distal5.972587.47823K562QKI
chr11027101710271132+intron-Distal,intron-Proximal5.158315.43043K562EFTUD2
chr11034910410349197+intron-Distal4.176973.80299K562HNRNPL
chr11034098110341074+intron-Distal5.313196.34754HepG2RBFOX2
chr11034090910340958+intron-Distal4.378373.40087HepG2RBFOX2
chr11037159510371648+intron-Distal4.000483.27829HepG2MATR3
chr11036262310362751+intron-Distal3.336837.15356HepG2QKI
chr11034079610340909+intron-Distal5.421488.25763HepG2RBFOX2
chr11029257410292723+intron-Distal,intron-Proximal3.752834.30679K562KHSRP
chr11033923210339334+intron-Distal,intron-Proximal4.285835.78025HepG2RBFOX2
chr11037159410371643+intron-Distal3.022843.10640HepG2SUGP2
chr11035246710352510+intron-Distal3.277343.16095HepG2U2AF2
chr11033503710335134+intron-Distal4.148933.22073HepG2KHSRP
chr11041289410412976+intron-Distal3.878856.98930HepG2U2AF2
chr11033840110338544+intron-Distal3.341445.34873K562KHSRP
chr11034958710349628+intron-Distal3.246323.00914HepG2PTBP1
chr11037999110380095+intron-Distal,intron-Proximal5.313028.82480HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KIF1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KIF1B is not available on ENCORE database.

  • 73 RBPs can affect the levels of KIF1B.  








The Knockdown/knockout RNA-Seq assay for KIF1B is not available on ENCORE database.





73 RBPs can affect the gene expression of KIF1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KIF1BENSG00000054523.121342.123002624.70640-0.9676013.0916010.98150HepG2BCCIP
KIF1BENSG00000054523.123697.742604760.29470-0.364402.305701.42410HepG2CCAR1
KIF1BENSG00000054523.122977.350403565.90830-0.260203.859903.09970HepG2CKAP4
KIF1BENSG00000054523.124370.587303414.585700.356006.426505.52480HepG2CELF1
KIF1BENSG00000054523.123715.051303298.488000.171502.327701.55810HepG2DDX19B
KIF1BENSG00000054523.121739.667102580.59110-0.568905.057604.04990HepG2DDX55
KIF1BENSG00000054523.122061.358302844.59070-0.464608.566707.38490HepG2DNAJC21
KIF1BENSG00000054523.122507.486902819.39900-0.169102.258901.65710HepG2DNAJC2
KIF1BENSG00000054523.121743.646202388.62390-0.454104.313302.92540HepG2EFTUD2
KIF1BENSG00000054523.123511.527202236.484400.6508011.249109.70880HepG2FUBP3
KIF1BENSG00000054523.124770.454203727.550200.355803.114602.16970HepG2G3BP2
KIF1BENSG00000054523.122487.622403374.19570-0.439809.095607.58400HepG2HNRNPA2B1
KIF1BENSG00000054523.122330.848603194.36880-0.454705.521604.56940HepG2HNRNPC
KIF1BENSG00000054523.122371.592903051.33800-0.363603.389202.04340HepG2LIN28B
KIF1BENSG00000054523.123007.056903786.32960-0.332402.510801.88400HepG2MAGOH
KIF1BENSG00000054523.124985.410203897.175300.355202.780202.14630HepG2NCBP2
KIF1BENSG00000054523.122902.269702343.231100.308602.574201.85110HepG2NSUN2
KIF1BENSG00000054523.122506.068803141.00590-0.325805.437304.30480HepG2PARN
KIF1BENSG00000054523.122230.581903509.14600-0.6537018.6499017.30140HepG2PCBP1
KIF1BENSG00000054523.122191.327502830.29090-0.369105.551504.53830HepG2PPIL4
KIF1BENSG00000054523.124169.188303689.198000.176402.973502.36380HepG2PUM1
KIF1BENSG00000054523.124890.035203686.487400.407506.399005.39540HepG2PUM2
KIF1BENSG00000054523.123124.246203632.55500-0.217503.205002.55360HepG2PUS1
KIF1BENSG00000054523.126471.270303866.980800.7427022.2011020.67980HepG2QKI
KIF1BENSG00000054523.125084.789304168.497100.286603.454202.50490HepG2RBM15
KIF1BENSG00000054523.124212.964503509.657800.263402.639901.97880HepG2RBM25
KIF1BENSG00000054523.124695.434503973.875600.240603.781903.16810HepG2NELFE
KIF1BENSG00000054523.124626.445103701.357600.321706.422405.53830HepG2RECQL
KIF1BENSG00000054523.122768.021103716.04860-0.424902.764201.96510HepG2RPS3A
KIF1BENSG00000054523.123408.798202615.586100.382003.901303.07570HepG2SF3B1
KIF1BENSG00000054523.124714.683903332.312400.5005018.0385016.54070HepG2SLBP
KIF1BENSG00000054523.124914.157905461.91930-0.152502.142901.68430HepG2SRFBP1
KIF1BENSG00000054523.124310.382103880.305400.151501.925901.51100HepG2SRSF1
KIF1BENSG00000054523.124085.499903431.372000.251603.919103.19660HepG2SRSF5
KIF1BENSG00000054523.124370.490503156.932300.4692013.3061012.25740HepG2SRSF9
KIF1BENSG00000054523.123219.756002569.003300.325602.348901.71920HepG2SUPV3L1
KIF1BENSG00000054523.125455.821103488.083000.6453018.1975016.94140HepG2TAF15
KIF1BENSG00000054523.124511.118603204.740700.493208.172506.74680HepG2TIA1
KIF1BENSG00000054523.122345.592803083.49750-0.394605.632404.96820HepG2TIAL1
KIF1BENSG00000054523.121758.657603110.96420-0.8229030.1515028.53490HepG2TRIM56
KIF1BENSG00000054523.125205.316103593.847600.534405.613104.39320HepG2UBE2L3
KIF1BENSG00000054523.121005.193401517.63350-0.594405.879104.76380HepG2UCHL5
KIF1BENSG00000054523.123552.325204049.18670-0.188902.620801.93760HepG2UPF1
KIF1BENSG00000054523.121696.262802352.59090-0.471902.636601.65810HepG2UPF2
KIF1BENSG00000054523.122484.777603909.31770-0.6538019.5728018.19920HepG2UTP3
KIF1BENSG00000054523.121817.524202528.90010-0.476504.284603.38790HepG2XRN2
KIF1BENSG00000054523.123850.758403118.487900.304206.417805.46470HepG2ZC3H8
KIF1BENSG00000054523.125286.955604453.318300.247505.599004.89110HepG2ZNF622
KIF1BENSG00000054523.122101.710302808.55230-0.418304.581603.73360K562AKAP8L
KIF1BENSG00000054523.122078.358102632.77340-0.341103.610502.17390K562APOBEC3C
KIF1BENSG00000054523.122376.559702946.81870-0.310304.000902.88480K562ATP5C1
KIF1BENSG00000054523.122698.093103225.65840-0.257702.574101.44790K562CCDC124
KIF1BENSG00000054523.12879.064001076.95310-0.292902.405301.42970K562CSTF2
KIF1BENSG00000054523.122033.768502358.50300-0.213702.334801.72800K562DDX47
KIF1BENSG00000054523.122429.901303022.29900-0.314704.436303.28990K562DKC1
KIF1BENSG00000054523.121103.795801364.16760-0.305502.931502.11220K562EIF3G
KIF1BENSG00000054523.121007.019401472.97340-0.548606.103704.81300K562FIP1L1
KIF1BENSG00000054523.121436.546901163.426900.304102.149601.39230K562FMR1
KIF1BENSG00000054523.121473.723101206.031900.289102.605101.30370K562FUS
KIF1BENSG00000054523.121445.526702180.14610-0.592808.600807.25000K562GRSF1
KIF1BENSG00000054523.12937.122501252.44590-0.418403.911003.21630K562HNRNPC
KIF1BENSG00000054523.12857.094601118.44420-0.384003.203001.96870K562HNRNPF
KIF1BENSG00000054523.121761.457002131.47470-0.275102.335201.37350K562HNRNPL
KIF1BENSG00000054523.12838.433001211.49960-0.531004.319703.14060K562HNRNPM
KIF1BENSG00000054523.122733.110203339.05030-0.288902.809301.89210K562MBNL1
KIF1BENSG00000054523.12944.906801233.16560-0.384102.703401.30790K562NUSAP1
KIF1BENSG00000054523.121117.309801672.05560-0.581606.812705.42480K562PPIG
KIF1BENSG00000054523.12790.477601243.24190-0.653306.774805.59910K562PRPF8
KIF1BENSG00000054523.12909.857501122.95130-0.303602.102201.32500K562PSIP1
KIF1BENSG00000054523.121088.990201467.60390-0.430504.549402.78030K562RBM25
KIF1BENSG00000054523.12883.817301133.06530-0.358402.897301.78940K562SAFB
KIF1BENSG00000054523.121726.570002007.76320-0.217702.010101.30750K562SF3A3
KIF1BENSG00000054523.121345.456701608.97550-0.258002.225601.46100K562SF3B4
KIF1BENSG00000054523.121101.177401437.40120-0.384403.603202.38020K562SRSF4
KIF1BENSG00000054523.121093.564501851.62540-0.7598010.621709.08350K562TARDBP
KIF1BENSG00000054523.12762.946001147.46850-0.588806.236804.68590K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KIF1B is not available on ENCORE database.





6 RBPs can affect the splicing of KIF1B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEKIF1BENSG00000054523.12chr1+1038616810386417103848151038495310394577103946960.427000.000000.00000includedHepG2U2AF2
SEKIF1BENSG00000054523.12chr1+1038616810386417103848151038495310394577103946960.081000.000570.03962includedHepG2FTO
SEKIF1BENSG00000054523.12chr1+1038616810386417103848151038495310394577103946960.146000.000160.01012includedHepG2MATR3
SEKIF1BENSG00000054523.12chr1+104349111043510410434373104345231043531210435431-0.252000.000000.00000excludedHepG2SRSF1
SEKIF1BENSG00000054523.12chr1+1038616810386417103848151038495310394577103946960.180000.000020.00855includedHepG2PRPF4
MXEKIF1BENSG00000054523.12chr1+10316304103163811031855010318730102923071029249210321962103220280.201000.000000.000051includedHepG2LARP4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for KIF1B is not avaliable on ENCORE database.