GNAI3

General Information

Gene Name       : GNAI3
Gene ID             : ENSG00000065135.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GNAI3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GNAI3ENSG00000065135.106.065.415.73ENCSR000AEF
HepG2GNAI3ENSG00000065135.103.154.693.92ENCSR985KAT
K562GNAI3ENSG00000065135.106.146.006.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GNAI3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GNAI3 RNA is bound by 20 proteins.  







eCLIP assay for GNAI3 is not avaliable on ENCORE database.





20 proteins are bound to GNAI3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1110135556110135605+3'-UTR3.528238.05487K562IGF2BP1
chr1110135644110135699+3'-UTR3.547017.95579K562IGF2BP1
chr1110134965110135050+3'-UTR,intron-Proximal5.4235535.23806HepG2SUB1
chr1110136066110136111+3'-UTR3.848913.21228K562TIA1
chr1110136038110136101+3'-UTR3.9030516.94329K562PUM2
chr1110136024110136080+3'-UTR6.1259211.71673HepG2SUB1
chr1110135983110136024+3'-UTR5.8192510.71230HepG2SUB1
chr1110134978110135028+3'-UTR3.413853.70638K562TROVE2
chr1110135845110135913+3'-UTR3.913956.87998K562TIA1
chr1110135648110135690+3'-UTR3.758623.19904K562TIA1
chr1110134858110134877+3'-UTR3.762766.20881HepG2SUB1
chr1110136059110136118+3'-UTR4.919766.05696K562IGF2BP1
chr1110135502110135546+3'-UTR4.126944.25090K562IGF2BP2
chr1110135499110135552+3'-UTR5.5933914.22317K562IGF2BP1
chr1110135164110135206+3'-UTR3.638805.75821HepG2SUB1
chr1110091259110091392+5'-UTR,CDS3.7376128.80911K562DDX3X
chr1110134695110134776+CDS3.515476.23043K562ZNF800
chr1110128901110128966+CDS3.758064.97737HepG2G3BP1
chr1110125060110125149+CDS4.4347025.83103K562YBX3
chr1110134671110134800+CDS3.533767.31809HepG2GRWD1
chr1110134709110134777+CDS4.054703.88780HepG2G3BP1
chr1110091404110091431+CDS3.931038.63185K562YBX3
chr1110128938110128968+CDS,intron-Proximal3.552515.16259K562LIN28B
chr1110128886110128938+CDS4.143318.16865K562LIN28B
chr1110134729110134777+CDS3.211625.66231K562PABPC4
chr1110125114110125191+CDS,intron-Proximal3.149164.84084K562ZNF800
chr1110091441110091499+CDS,intron-Proximal4.926426.35567HepG2PRPF8
chr1110134681110134797+CDS3.343377.33138HepG2BCLAF1
chr1110121898110121962+CDS4.091703.96931HepG2G3BP1
chr1110128820110128882+CDS,intron-Proximal4.673257.81397K562U2AF2
chr1110091404110091460+CDS3.109764.89942HepG2GRWD1
chr1110134680110134770+CDS3.239665.57219K562PUM1
chr1110091431110091440+CDS3.257186.00087K562YBX3
chr1110116600110116639+CDS3.397233.79230K562SND1
chr1110091393110091404+CDS3.907775.53855K562YBX3
chr1110134695110134755+CDS4.932434.77152K562IGF2BP1
chr1110117892110118001+intron-Distal6.7340019.78370K562PTBP1
chr1110127220110127291+intron-Distal4.013154.36528HepG2U2AF2
chr1110117863110117984+intron-Distal6.2345420.03627HepG2PTBP1
chr1110128981110129006+intron-Proximal4.929354.65563K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GNAI3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GNAI3 is not available on ENCORE database.

  • 85 RBPs can affect the levels of GNAI3.  








The Knockdown/knockout RNA-Seq assay for GNAI3 is not available on ENCORE database.





85 RBPs can affect the gene expression of GNAI3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GNAI3ENSG00000065135.71981.828801541.540100.362406.206905.36980HepG2ACO1
GNAI3ENSG00000065135.71998.242002599.13330-0.379302.548902.03680HepG2AKAP1
GNAI3ENSG00000065135.71226.555102054.65540-0.744307.103605.52960HepG2CCAR1
GNAI3ENSG00000065135.7924.855201373.73910-0.570803.273302.43520HepG2CNOT7
GNAI3ENSG00000065135.71550.376302118.11270-0.450206.077805.03960HepG2DAZAP1
GNAI3ENSG00000065135.7905.144101367.48640-0.595306.356105.32660HepG2DNAJC21
GNAI3ENSG00000065135.71045.060601355.27760-0.375006.021105.11320HepG2DNAJC2
GNAI3ENSG00000065135.7709.51620958.12510-0.433403.157001.97390HepG2EFTUD2
GNAI3ENSG00000065135.71613.468602056.13920-0.349802.519601.95320HepG2EIF2S1
GNAI3ENSG00000065135.71570.608602272.39000-0.532904.560903.74360HepG2EIF4A3
GNAI3ENSG00000065135.71834.371002089.33680-0.187802.160601.40550HepG2EIF4G1
GNAI3ENSG00000065135.71257.587502126.71930-0.758009.005107.83990HepG2G3BP1
GNAI3ENSG00000065135.7943.627801380.58590-0.549006.280505.36570HepG2HNRNPA1
GNAI3ENSG00000065135.71106.905901535.60220-0.472304.804703.90840HepG2HNRNPC
GNAI3ENSG00000065135.71225.177101449.38050-0.242402.336901.67430HepG2HNRNPF
GNAI3ENSG00000065135.71542.879202153.07070-0.480804.983504.06650HepG2HNRNPK
GNAI3ENSG00000065135.71339.783601929.54820-0.526309.415308.24330HepG2HNRNPL
GNAI3ENSG00000065135.71056.186801525.45300-0.530409.943108.85110HepG2HNRNPU
GNAI3ENSG00000065135.71174.273201427.22980-0.281402.293201.63210HepG2IGF2BP1
GNAI3ENSG00000065135.71211.014301558.20730-0.363706.272805.21220HepG2ILF2
GNAI3ENSG00000065135.71136.544001409.22000-0.310204.337903.07130HepG2KIF1C
GNAI3ENSG00000065135.7945.178201370.71630-0.536303.488002.08290HepG2KRR1
GNAI3ENSG00000065135.71562.001702100.29680-0.427205.473404.40650HepG2NOL12
GNAI3ENSG00000065135.71282.442001509.99270-0.235602.319601.53700HepG2PARN
GNAI3ENSG00000065135.71232.427602242.24240-0.8634028.0522026.46150HepG2PCBP1
GNAI3ENSG00000065135.7732.564701360.58990-0.8932020.0268018.18270HepG2PPIL4
GNAI3ENSG00000065135.71559.020402281.50780-0.5493011.4677010.50410HepG2PTBP1
GNAI3ENSG00000065135.71777.072602128.08410-0.260103.726703.06020HepG2PUM1
GNAI3ENSG00000065135.72504.489802126.602700.235901.894001.33320HepG2PUM2
GNAI3ENSG00000065135.71608.716602471.05230-0.6192012.3316011.15050HepG2QKI
GNAI3ENSG00000065135.72454.761301493.144100.717104.649403.74860HepG2RAVER1
GNAI3ENSG00000065135.71470.738501800.94170-0.292202.777701.91960HepG2RBM15
GNAI3ENSG00000065135.72512.742002172.383600.209902.164101.69100HepG2RBM22
GNAI3ENSG00000065135.71931.865602539.14710-0.394306.965206.17520HepG2NELFE
GNAI3ENSG00000065135.71828.310902364.78340-0.371206.367505.48710HepG2RECQL
GNAI3ENSG00000065135.7644.66030907.81930-0.493904.513703.74850HepG2RPS19
GNAI3ENSG00000065135.7895.100401358.50950-0.6019011.000709.84860HepG2SAFB2
GNAI3ENSG00000065135.72358.240301556.323400.599504.981604.05940HepG2SF3A3
GNAI3ENSG00000065135.71273.716801584.29560-0.314804.793403.98430HepG2SMN1
GNAI3ENSG00000065135.71163.167101521.35310-0.387302.165701.32890HepG2SMNDC1
GNAI3ENSG00000065135.71769.364201284.348400.462102.531901.78520HepG2SNRNP70
GNAI3ENSG00000065135.73342.870302453.661900.4461011.5338010.69980HepG2SRFBP1
GNAI3ENSG00000065135.7848.009301241.94490-0.550403.897102.68650HepG2SRSF3
GNAI3ENSG00000065135.71224.799501423.95560-0.217402.012501.40870HepG2SRSF7
GNAI3ENSG00000065135.71598.894602017.09630-0.335205.496304.76420HepG2SRSF9
GNAI3ENSG00000065135.7957.340201366.68850-0.513603.999802.48090HepG2SSRP1
GNAI3ENSG00000065135.71441.747402228.47390-0.6282013.0139011.93420HepG2TAF15
GNAI3ENSG00000065135.71718.379702047.78820-0.253002.248801.49360HepG2TIA1
GNAI3ENSG00000065135.7962.051501482.42880-0.623806.688305.97210HepG2TIAL1
GNAI3ENSG00000065135.7897.706001495.50220-0.7363017.8281016.55870HepG2TRIM56
GNAI3ENSG00000065135.71644.104101958.42920-0.252402.080001.33240HepG2TUFM
GNAI3ENSG00000065135.71763.444801353.450200.381703.109902.44570HepG2U2AF1
GNAI3ENSG00000065135.7644.52610849.61770-0.398602.335801.63730HepG2UCHL5
GNAI3ENSG00000065135.71004.144001380.22060-0.458907.509906.45150HepG2UPF1
GNAI3ENSG00000065135.71559.833201332.549300.227102.244901.69320HepG2UTP3
GNAI3ENSG00000065135.71022.450401415.68270-0.469503.259902.47700HepG2XRN2
GNAI3ENSG00000065135.71782.032801517.979000.231303.103802.53460HepG2ZNF622
GNAI3ENSG00000065135.73680.897002718.928000.436909.831508.84380K562AGGF1
GNAI3ENSG00000065135.73753.409402987.609900.329103.144502.08180K562AKAP8
GNAI3ENSG00000065135.73749.669302829.147900.406304.574803.72750K562AKAP8L
GNAI3ENSG00000065135.73467.069702968.419600.223902.361301.52410K562ATP5C1
GNAI3ENSG00000065135.7542.34580949.50680-0.808005.585003.95340K562CCAR1
GNAI3ENSG00000065135.73995.634003249.332900.298203.422002.09140K562CCDC124
GNAI3ENSG00000065135.72072.065102953.62230-0.511402.662801.62680K562CNOT7
GNAI3ENSG00000065135.71641.382602004.61140-0.288402.603801.84180K562CPSF6
GNAI3ENSG00000065135.71560.353901863.91160-0.256502.647501.61590K562CSTF2
GNAI3ENSG00000065135.74104.841103551.342200.208902.738002.09030K562DDX47
GNAI3ENSG00000065135.73722.426203044.490800.289903.955702.88380K562DKC1
GNAI3ENSG00000065135.71437.479902084.29300-0.536005.654304.32180K562EFTUD2
GNAI3ENSG00000065135.71797.571802629.22740-0.548603.667602.72640K562EIF4A3
GNAI3ENSG00000065135.73567.229202637.232600.435702.470201.80840K562G3BP2
GNAI3ENSG00000065135.73462.021804271.21360-0.303002.463601.74840K562GRSF1
GNAI3ENSG00000065135.71490.859902001.32470-0.424804.423803.68700K562HNRNPC
GNAI3ENSG00000065135.72821.188703303.39000-0.227602.424501.58760K562HNRNPU
GNAI3ENSG00000065135.74500.097503746.431100.264302.104901.40780K562HSPD1
GNAI3ENSG00000065135.71227.332801634.23970-0.413102.570401.67420K562KRR1
GNAI3ENSG00000065135.71431.032501783.94910-0.318002.867101.31250K562LSM11
GNAI3ENSG00000065135.73786.964302874.077500.397804.206102.79810K562MAK16
GNAI3ENSG00000065135.74386.110203363.551900.382904.404803.20690K562MBNL1
GNAI3ENSG00000065135.71692.120702510.52840-0.5692014.1857012.52590K562MTPAP
GNAI3ENSG00000065135.73481.998902357.600200.562504.479603.27230K562NAA15
GNAI3ENSG00000065135.72346.772302789.34900-0.249304.694403.75640K562NSUN2
GNAI3ENSG00000065135.71454.981901970.09370-0.437303.491001.82170K562NUSAP1
GNAI3ENSG00000065135.71547.079501953.71330-0.336702.748401.33390K562PHF6
GNAI3ENSG00000065135.71807.357402627.56680-0.539803.669501.56530K562PPIL4
GNAI3ENSG00000065135.73004.497102028.251300.566807.253106.04120K562PRPF8
GNAI3ENSG00000065135.71154.602501794.32460-0.636007.966206.27030K562PSIP1
GNAI3ENSG00000065135.72479.726003210.69820-0.372704.524803.69600K562PTBP1
GNAI3ENSG00000065135.75163.375302805.881200.8798017.2389015.92670K562PUS1
GNAI3ENSG00000065135.73800.397902733.790200.475108.760807.73330K562RBM15
GNAI3ENSG00000065135.72241.361103078.84490-0.458005.257304.05430K562RBM22
GNAI3ENSG00000065135.71337.196201636.73830-0.291602.260301.36900K562RCC2
GNAI3ENSG00000065135.72774.503802066.165400.425203.607702.67310K562RPS19
GNAI3ENSG00000065135.71174.892001551.62040-0.401203.582502.37190K562SRFBP1
GNAI3ENSG00000065135.72498.460503147.52000-0.333203.681902.87170K562SRSF1
GNAI3ENSG00000065135.71215.925401763.33320-0.536306.826205.05020K562SRSF4
GNAI3ENSG00000065135.72499.650803185.57030-0.349803.032802.29170K562TARDBP
GNAI3ENSG00000065135.71505.479201833.13610-0.284102.184301.35880K562TRIM56
GNAI3ENSG00000065135.73251.761302556.084400.347202.456901.43730K562U2AF1
GNAI3ENSG00000065135.73436.884902639.960900.380505.083604.00030K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GNAI3 is not available on ENCORE database.





1 RBPs can affect the splicing of GNAI3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGNAI3ENSG00000065135.7chr1+110125032110125187110121775110121983110128837110128967-0.061000.000000.00002excludedK562AQR
MXEGNAI3ENSG00000065135.7chr1+110116517110116659110121761110121983110116358110116401110128837110128967-0.082000.000010.000142includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GNAI3 is not avaliable on ENCORE database.