FAM168A

General Information

Gene Name : FAM168A
Gene ID : ENSG00000054965.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FAM168A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FAM168A	ENSG00000054965.10	8.92	9.77	9.34	ENCSR000AEF
HepG2	FAM168A	ENSG00000054965.10	12.33	11.44	11.88	ENCSR985KAT
K562	FAM168A	ENSG00000054965.10	3.46	3.20	3.33	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FAM168A is not avaliable on ENCORE database.

Proteins bound to RNA

FAM168A RNA is bound by 19 proteins.

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eCLIP assay for FAM168A is not avaliable on ENCORE database.

19 proteins are bound to FAM168A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	73116965	73117151	-	3'-UTR,intron-Distal,intron-Proximal,polyA_site	8.23082	71.33323	K562	UPF1
chr11	73117045	73117167	-	3'-UTR,intron-Distal	7.62514	49.16095	HepG2	UPF1
chr11	73117048	73117158	-	3'-UTR,intron-Distal	4.70167	24.88632	HepG2	AKAP1
chr11	73303599	73303689	-	intron-Distal	4.61163	19.34756	HepG2	PCBP2
chr11	73116760	73116827	-	3'-UTR,intron-Distal	5.27146	17.44157	HepG2	UPF1
chr11	73117427	73117526	-	3'-UTR,intron-Distal	5.38001	17.44157	HepG2	UPF1
chr11	73117079	73117153	-	3'-UTR,intron-Distal	4.23338	17.19853	K562	FAM120A
chr11	73303689	73303713	-	intron-Distal	5.38319	16.88044	HepG2	PCBP2
chr11	73117526	73117568	-	3'-UTR,intron-Distal	5.85665	15.42180	HepG2	UPF1
chr11	73117058	73117156	-	3'-UTR,intron-Distal	4.20641	15.24564	HepG2	FAM120A
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 61 entries

eCLIP assay for FAM168A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FAM168A is not available on ENCORE database.
111 RBPs can affect the levels of FAM168A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FAM168A is not available on ENCORE database.

111 RBPs can affect the gene expression of FAM168A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FAM168A	ENSG00000054965.6	2218.17530	1168.31520	0.92480	31.17630	29.51770	HepG2	PCBP1
FAM168A	ENSG00000054965.6	1962.41130	1051.02840	0.90070	30.43590	28.98420	HepG2	SRSF9
FAM168A	ENSG00000054965.6	849.10450	1649.34960	-0.95790	21.03020	19.28970	HepG2	PUM2
FAM168A	ENSG00000054965.6	2162.37040	1323.02870	0.70870	17.75120	16.61070	HepG2	NELFE
FAM168A	ENSG00000054965.6	808.19360	1346.57800	-0.73650	16.57110	14.52080	HepG2	HDGF
FAM168A	ENSG00000054965.6	743.38070	390.65230	0.92810	16.08640	14.51750	K562	UPF1
FAM168A	ENSG00000054965.6	996.58210	1620.57870	-0.70140	15.54420	13.89060	HepG2	EIF4G1
FAM168A	ENSG00000054965.6	1964.31950	1084.64100	0.85670	14.58820	13.36580	HepG2	BOP1
FAM168A	ENSG00000054965.6	2612.73520	1746.90350	0.58070	13.70380	12.38190	HepG2	AUH
FAM168A	ENSG00000054965.6	1297.27460	713.99390	0.86140	13.44820	11.77440	HepG2	FUBP3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 133 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FAM168A is not available on ENCORE database.

5 RBPs can affect the splicing of FAM168A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	FAM168A	ENSG00000054965.6	chr11	-	73136066	73136093	73130918	73131044	73141734	73141815	0.12000	0.00054	0.05808	included	HepG2	LARP4
SE	FAM168A	ENSG00000054965.6	chr11	-	73130918	73131044	73122438	73122581	73141734	73141815	-0.12500	0.00056	0.05276	excluded	HepG2	SRSF7
SE	FAM168A	ENSG00000054965.6	chr11	-	73136066	73136093	73130918	73131044	73141734	73141815	0.20500	0.00191	0.08397	included	HepG2	PTBP1
SE	FAM168A	ENSG00000054965.6	chr11	-	73179449	73179537	73141734	73141815	73308967	73309234	-0.10000	0.00265	0.06499	excluded	HepG2	SF3A3
SE	FAM168A	ENSG00000054965.6	chr11	-	73130918	73131044	73122438	73122581	73141734	73141815	-0.15100	0.00374	0.04196	excluded	HepG2	U2AF2

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FAM168A

General Information

Functions

Localization

Domains (AlphaFold: FAM168A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FAM168A is not avaliable on ENCORE database.

19 proteins are bound to FAM168A RNA:

eCLIP assay for FAM168A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FAM168A is not available on ENCORE database.

111 RBPs can affect the gene expression of FAM168A :

The Knockdown/knockout RNA-Seq assay for FAM168A is not available on ENCORE database.

5 RBPs can affect the splicing of FAM168A :

The Knockdown/knockout RNA-Seq assay for FAM168A is not avaliable on ENCORE database.