FAM118A

General Information

Gene Name : FAM118A
Gene ID : ENSG00000100376.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FAM118A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FAM118A	ENSG00000100376.11	46.61	45.14	45.88	ENCSR000AEF
HepG2	FAM118A	ENSG00000100376.11	40.13	39.91	40.02	ENCSR985KAT
K562	FAM118A	ENSG00000100376.11	51.46	51.69	51.58	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FAM118A is not avaliable on ENCORE database.

Proteins bound to RNA

FAM118A RNA is bound by 42 proteins.

CanvasJS.com

eCLIP assay for FAM118A is not avaliable on ENCORE database.

42 proteins are bound to FAM118A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	45723887	45723945	+	CDS,intron-Proximal	6.02449	36.01995	HepG2	SRSF9
chr22	45726464	45726536	+	5'-UTR,CDS,intron-Proximal	5.74546	32.67939	K562	U2AF2
chr22	45724275	45724300	+	CDS,intron-Distal	6.78657	32.43191	HepG2	SRSF9
chr22	45726421	45726503	+	5'-UTR,CDS,intron-Proximal	4.75889	32.27182	K562	SF3B4
chr22	45724272	45724275	+	CDS,intron-Distal,intron-Proximal	5.69742	29.21951	HepG2	SRSF9
chr22	45728341	45728388	+	CDS	5.30900	28.42465	K562	RBM15
chr22	45723754	45723862	+	CDS	4.66432	26.16859	K562	SRSF1
chr22	45728554	45728600	+	CDS,intron-Proximal	4.90987	22.45274	K562	RBM15
chr22	45723881	45723947	+	CDS,intron-Proximal	5.27722	22.07045	HepG2	SLTM
chr22	45737705	45737797	+	3'-UTR	4.90471	19.00341	K562	ZC3H11A
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 109 entries

eCLIP assay for FAM118A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FAM118A is not available on ENCORE database.
108 RBPs can affect the levels of FAM118A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FAM118A is not available on ENCORE database.

108 RBPs can affect the gene expression of FAM118A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FAM118A	ENSG00000100376.7	769.71060	1928.58830	-1.32520	28.84690	26.42780	K562	PRPF8
FAM118A	ENSG00000100376.7	434.73970	994.12860	-1.19330	26.16910	24.90120	HepG2	RBM22
FAM118A	ENSG00000100376.7	964.88850	2208.69960	-1.19480	27.52430	24.74260	K562	RBM22
FAM118A	ENSG00000100376.7	610.89580	1170.99520	-0.93870	24.09870	22.55650	HepG2	SUCLG1
FAM118A	ENSG00000100376.7	431.07260	854.10930	-0.98650	21.40150	20.06640	HepG2	ACO1
FAM118A	ENSG00000100376.7	1198.18380	2257.96330	-0.91420	20.32780	18.42640	K562	SRSF1
FAM118A	ENSG00000100376.7	2098.47810	4006.34560	-0.93290	19.10050	17.72380	K562	AQR
FAM118A	ENSG00000100376.7	343.27090	694.66400	-1.01700	18.86710	17.39370	HepG2	HNRNPU
FAM118A	ENSG00000100376.7	348.87240	897.57360	-1.36330	17.46290	16.24440	HepG2	AKAP1
FAM118A	ENSG00000100376.7	646.09150	1122.81250	-0.79730	16.84070	15.87870	HepG2	SRFBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 123 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FAM118A is not available on ENCORE database.

30 RBPs can affect the splicing of FAM118A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	FAM118A	ENSG00000100376.7	chr22	+	45733714	45733849	45732275	45732292	45736266	45736763	0.19800	0.00000	included	K562	MATR3
SE	FAM118A	ENSG00000100376.7	chr22	+	45733714	45733849	45732275	45732292	45736266	45736763	0.09600	0.00007	included	HepG2	U2AF2
SE	FAM118A	ENSG00000100376.7	chr22	+	45731230	45731263	45728305	45728591	45732208	45732292	-0.13400	0.00000	excluded	K562	PUS1
SE	FAM118A	ENSG00000100376.7	chr22	+	45733714	45733849	45732275	45732292	45736266	45736763	0.19500	0.00000	included	K562	HNRNPM
SE	FAM118A	ENSG00000100376.7	chr22	+	45719957	45720107	45719055	45719308	45723722	45724122	0.37000	0.00000	included	K562	HNRNPM
SE	FAM118A	ENSG00000100376.7	chr22	+	45733714	45733849	45732275	45732292	45736266	45736763	0.09000	0.00009	included	K562	HNRNPL
SE	FAM118A	ENSG00000100376.7	chr22	+	45731230	45731263	45728305	45728591	45732208	45732292	-0.14200	0.00000	excluded	K562	UTP18
SE	FAM118A	ENSG00000100376.7	chr22	+	45731230	45731263	45728305	45728591	45732208	45732292	-0.23000	0.00000	excluded	K562	HNRNPU
SE	FAM118A	ENSG00000100376.7	chr22	+	45731230	45731263	45728305	45728591	45732208	45732292	-0.09600	0.00000	excluded	K562	RBM15
SE	FAM118A	ENSG00000100376.7	chr22	+	45717927	45718096	45706017	45706064	45718251	45718307	0.15100	0.00003	included	K562	AGGF1

Showing 1 to 10 of 39 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FAM118A

General Information

Functions

Localization

Domains (AlphaFold: FAM118A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FAM118A is not avaliable on ENCORE database.

42 proteins are bound to FAM118A RNA:

eCLIP assay for FAM118A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FAM118A is not available on ENCORE database.

108 RBPs can affect the gene expression of FAM118A :

The Knockdown/knockout RNA-Seq assay for FAM118A is not available on ENCORE database.

30 RBPs can affect the splicing of FAM118A :

The Knockdown/knockout RNA-Seq assay for FAM118A is not avaliable on ENCORE database.